EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000002655 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: gastrula zinc finger protein XlCGF26.1-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 18232 bases
Position: chr1:34355854-34374085
Accession: 108273054
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000003862	zf-C2H2	PF00096.26	1.3e-54	1	9
ENSIPUP00000003862	zf-C2H2	PF00096.26	1.3e-54	2	9
ENSIPUP00000003862	zf-C2H2	PF00096.26	1.3e-54	3	9
ENSIPUP00000003862	zf-C2H2	PF00096.26	1.3e-54	4	9
ENSIPUP00000003862	zf-C2H2	PF00096.26	1.3e-54	5	9
ENSIPUP00000003862	zf-C2H2	PF00096.26	1.3e-54	6	9
ENSIPUP00000003862	zf-C2H2	PF00096.26	1.3e-54	7	9
ENSIPUP00000003862	zf-C2H2	PF00096.26	1.3e-54	8	9
ENSIPUP00000003862	zf-C2H2	PF00096.26	1.3e-54	9	9
ENSIPUP00000003797	zf-C2H2	PF00096.26	1.7e-50	1	7
ENSIPUP00000003797	zf-C2H2	PF00096.26	1.7e-50	2	7
ENSIPUP00000003797	zf-C2H2	PF00096.26	1.7e-50	3	7
ENSIPUP00000003797	zf-C2H2	PF00096.26	1.7e-50	4	7
ENSIPUP00000003797	zf-C2H2	PF00096.26	1.7e-50	5	7
ENSIPUP00000003797	zf-C2H2	PF00096.26	1.7e-50	6	7
ENSIPUP00000003797	zf-C2H2	PF00096.26	1.7e-50	7	7
ENSIPUP00000003845	zf-C2H2	PF00096.26	1.1e-38	1	6
ENSIPUP00000003845	zf-C2H2	PF00096.26	1.1e-38	2	6
ENSIPUP00000003845	zf-C2H2	PF00096.26	1.1e-38	3	6
ENSIPUP00000003845	zf-C2H2	PF00096.26	1.1e-38	4	6
ENSIPUP00000003845	zf-C2H2	PF00096.26	1.1e-38	5	6
ENSIPUP00000003845	zf-C2H2	PF00096.26	1.1e-38	6	6
ENSIPUP00000003845	zf-met	PF12874.7	1.2e-15	1	3
ENSIPUP00000003845	zf-met	PF12874.7	1.2e-15	2	3
ENSIPUP00000003845	zf-met	PF12874.7	1.2e-15	3	3
ENSIPUP00000003797	zf-met	PF12874.7	2e-08	1	2
ENSIPUP00000003797	zf-met	PF12874.7	2e-08	2	2
ENSIPUP00000003862	zf-met	PF12874.7	3.4e-08	1	2
ENSIPUP00000003862	zf-met	PF12874.7	3.4e-08	2	2
ENSIPUP00000003845	zf-C2H2_jaz	PF12171.8	6.4e-27	1	1
ENSIPUP00000003862	zf-C2H2_jaz	PF12171.8	1.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000004043	-	951	-	ENSIPUP00000003862	316 (aa)	-	-
ENSIPUT00000004025	-	711	-	ENSIPUP00000003845	236 (aa)	-	-
ENSIPUT00000003978	-	894	XM_017482020	ENSIPUP00000003797	297 (aa)	XP_017337509	-

Gene Model

Click here to download ENSIPUG00000002655's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000002655's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000002655	-	97	51.695	ENSIPUG00000013083	-	51	51.695
ENSIPUG00000002655	-	97	74.242	ENSIPUG00000016075	-	91	74.242
ENSIPUG00000002655	-	99	33.906	ENSIPUG00000015037	znf711	52	33.906
ENSIPUG00000002655	-	98	60.169	ENSIPUG00000015233	-	70	60.169
ENSIPUG00000002655	-	98	63.333	ENSIPUG00000021556	-	88	63.333
ENSIPUG00000002655	-	98	63.682	ENSIPUG00000015468	-	90	63.014
ENSIPUG00000002655	-	97	46.360	ENSIPUG00000022266	ZNF135	61	47.343
ENSIPUG00000002655	-	97	60.099	ENSIPUG00000006936	-	95	61.582
ENSIPUG00000002655	-	99	32.353	ENSIPUG00000013526	-	86	46.667
ENSIPUG00000002655	-	99	46.535	ENSIPUG00000016009	znf596	71	46.939
ENSIPUG00000002655	-	98	40.800	ENSIPUG00000011258	-	87	40.800
ENSIPUG00000002655	-	95	36.905	ENSIPUG00000015844	snai1b	60	35.849
ENSIPUG00000002655	-	97	46.032	ENSIPUG00000011652	znf648	76	45.946
ENSIPUG00000002655	-	98	38.012	ENSIPUG00000002075	znf341	50	38.012
ENSIPUG00000002655	-	97	59.884	ENSIPUG00000013065	-	93	55.245
ENSIPUG00000002655	-	98	68.056	ENSIPUG00000015294	-	62	68.056
ENSIPUG00000002655	-	96	63.333	ENSIPUG00000023635	-	97	57.534
ENSIPUG00000002655	-	99	33.333	ENSIPUG00000024004	-	80	33.333
ENSIPUG00000002655	-	98	60.428	ENSIPUG00000021472	-	75	64.662
ENSIPUG00000002655	-	98	68.750	ENSIPUG00000015400	-	96	68.750
ENSIPUG00000002655	-	98	69.892	ENSIPUG00000005339	-	85	69.892
ENSIPUG00000002655	-	98	61.353	ENSIPUG00000001941	-	83	61.353
ENSIPUG00000002655	-	100	57.895	ENSIPUG00000006916	-	76	58.804
ENSIPUG00000002655	-	93	40.741	ENSIPUG00000012845	si:dkey-89b17.4	54	40.741
ENSIPUG00000002655	-	96	44.068	ENSIPUG00000005547	-	56	44.068
ENSIPUG00000002655	-	98	59.794	ENSIPUG00000021441	-	93	59.794
ENSIPUG00000002655	-	98	40.650	ENSIPUG00000008581	znf319b	90	42.857
ENSIPUG00000002655	-	98	44.068	ENSIPUG00000012769	gfi1b	51	44.915
ENSIPUG00000002655	-	98	63.235	ENSIPUG00000022751	-	96	62.791
ENSIPUG00000002655	-	99	57.488	ENSIPUG00000023688	-	97	56.633
ENSIPUG00000002655	-	98	62.553	ENSIPUG00000005733	-	72	62.128
ENSIPUG00000002655	-	98	52.083	ENSIPUG00000007076	-	94	52.083
ENSIPUG00000002655	-	97	49.412	ENSIPUG00000019706	-	61	49.412
ENSIPUG00000002655	-	99	53.333	ENSIPUG00000011399	zbtb47b	88	55.357
ENSIPUG00000002655	-	98	63.866	ENSIPUG00000012960	-	90	63.866
ENSIPUG00000002655	-	98	47.191	ENSIPUG00000012830	-	80	47.191
ENSIPUG00000002655	-	98	59.551	ENSIPUG00000021518	-	89	60.550
ENSIPUG00000002655	-	97	61.509	ENSIPUG00000021515	-	85	60.481
ENSIPUG00000002655	-	98	64.975	ENSIPUG00000021998	-	90	64.975
ENSIPUG00000002655	-	95	41.667	ENSIPUG00000024011	-	54	39.091
ENSIPUG00000002655	-	96	47.343	ENSIPUG00000019205	-	74	47.343
ENSIPUG00000002655	-	99	52.632	ENSIPUG00000004905	znf236	69	52.632
ENSIPUG00000002655	-	97	32.308	ENSIPUG00000008809	hinfp	51	32.143
ENSIPUG00000002655	-	98	64.583	ENSIPUG00000015601	-	52	64.583
ENSIPUG00000002655	-	98	61.017	ENSIPUG00000007934	-	99	61.017
ENSIPUG00000002655	-	98	70.833	ENSIPUG00000003960	-	84	68.201
ENSIPUG00000002655	-	98	63.333	ENSIPUG00000009750	-	94	63.333
ENSIPUG00000002655	-	98	50.000	ENSIPUG00000001248	prdm5	69	50.000
ENSIPUG00000002655	-	98	67.164	ENSIPUG00000022741	-	79	67.164
ENSIPUG00000002655	-	98	57.143	ENSIPUG00000021434	-	95	57.143
ENSIPUG00000002655	-	98	60.000	ENSIPUG00000004428	-	74	60.000
ENSIPUG00000002655	-	95	48.333	ENSIPUG00000018102	znf646	73	48.333
ENSIPUG00000002655	-	99	56.343	ENSIPUG00000017575	-	62	56.725
ENSIPUG00000002655	-	98	57.865	ENSIPUG00000015121	-	60	56.731
ENSIPUG00000002655	-	98	44.643	ENSIPUG00000005379	e4f1	71	44.643
ENSIPUG00000002655	-	97	47.619	ENSIPUG00000012109	ZN12	52	47.619
ENSIPUG00000002655	-	98	62.644	ENSIPUG00000021484	-	100	62.644
ENSIPUG00000002655	-	98	57.971	ENSIPUG00000005581	-	77	57.971
ENSIPUG00000002655	-	98	58.706	ENSIPUG00000011073	-	98	58.706
ENSIPUG00000002655	-	96	40.984	ENSIPUG00000000131	snai2	51	40.984
ENSIPUG00000002655	-	97	62.176	ENSIPUG00000015203	-	53	62.176
ENSIPUG00000002655	-	98	50.246	ENSIPUG00000013315	-	93	50.246
ENSIPUG00000002655	-	99	55.556	ENSIPUG00000023761	-	63	55.556
ENSIPUG00000002655	-	97	58.192	ENSIPUG00000021527	-	94	53.425
ENSIPUG00000002655	-	98	65.986	ENSIPUG00000015177	-	67	57.565
ENSIPUG00000002655	-	97	55.357	ENSIPUG00000003040	zbtb47a	76	55.357

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000002655	-	96	59.091	ENSAPOG00000006303	-	92	59.091	Acanthochromis_polyacanthus
ENSIPUG00000002655	-	98	58.333	ENSAPOG00000008802	-	99	52.431	Acanthochromis_polyacanthus
ENSIPUG00000002655	-	98	46.809	ENSAPOG00000019960	-	91	46.919	Acanthochromis_polyacanthus
ENSIPUG00000002655	-	99	49.302	ENSACIG00000004745	-	95	49.302	Amphilophus_citrinellus
ENSIPUG00000002655	-	99	50.769	ENSACIG00000022658	-	98	50.769	Amphilophus_citrinellus
ENSIPUG00000002655	-	97	50.769	ENSAOCG00000013130	-	85	50.279	Amphiprion_ocellaris
ENSIPUG00000002655	-	98	48.966	ENSAOCG00000013710	-	86	48.966	Amphiprion_ocellaris
ENSIPUG00000002655	-	97	49.624	ENSAOCG00000014165	-	81	49.624	Amphiprion_ocellaris
ENSIPUG00000002655	-	97	54.255	ENSAPEG00000006650	-	89	53.623	Amphiprion_percula
ENSIPUG00000002655	-	97	52.866	ENSAPEG00000009383	-	75	52.866	Amphiprion_percula
ENSIPUG00000002655	-	98	55.137	ENSATEG00000017618	-	95	55.137	Anabas_testudineus
ENSIPUG00000002655	-	98	55.137	ENSATEG00000015695	-	98	53.497	Anabas_testudineus
ENSIPUG00000002655	-	97	52.273	ENSACLG00000023513	-	89	48.744	Astatotilapia_calliptera
ENSIPUG00000002655	-	99	43.403	ENSACLG00000019291	-	91	45.495	Astatotilapia_calliptera
ENSIPUG00000002655	-	97	53.409	ENSACLG00000021343	-	95	53.299	Astatotilapia_calliptera
ENSIPUG00000002655	-	98	55.435	ENSACLG00000018746	-	88	48.864	Astatotilapia_calliptera
ENSIPUG00000002655	-	98	53.211	ENSACLG00000026703	-	77	53.670	Astatotilapia_calliptera
ENSIPUG00000002655	-	100	60.924	ENSAMXG00000042275	-	94	60.924	Astyanax_mexicanus
ENSIPUG00000002655	-	96	69.474	ENSAMXG00000041975	-	80	69.474	Astyanax_mexicanus
ENSIPUG00000002655	-	98	58.654	ENSAMXG00000043302	-	72	58.654	Astyanax_mexicanus
ENSIPUG00000002655	-	98	65.641	ENSAMXG00000035920	-	93	65.641	Astyanax_mexicanus
ENSIPUG00000002655	-	98	58.371	ENSAMXG00000039408	-	88	58.371	Astyanax_mexicanus
ENSIPUG00000002655	-	99	51.531	ENSBTAG00000016191	ZNF32	82	53.254	Bos_taurus
ENSIPUG00000002655	-	99	50.246	ENSCHIG00000021099	ZNF32	82	53.254	Capra_hircus
ENSIPUG00000002655	-	98	51.587	ENSCSAVG00000001808	-	100	51.587	Ciona_savignyi
ENSIPUG00000002655	-	99	56.061	ENSCVAG00000021225	-	97	55.263	Cyprinodon_variegatus
ENSIPUG00000002655	-	98	49.653	ENSDARG00000099986	si:ch211-207i20.2	60	50.862	Danio_rerio
ENSIPUG00000002655	-	98	54.118	ENSDNOG00000035046	ZNF32	90	54.118	Dasypus_novemcinctus
ENSIPUG00000002655	-	99	51.531	ENSEASG00005006910	ZNF32	73	51.531	Equus_asinus_asinus
ENSIPUG00000002655	-	99	51.531	ENSECAG00000023676	ZNF32	73	51.531	Equus_caballus
ENSIPUG00000002655	-	97	51.562	ENSELUG00000021229	-	83	51.562	Esox_lucius
ENSIPUG00000002655	-	98	52.679	ENSFHEG00000018063	-	89	51.429	Fundulus_heteroclitus
ENSIPUG00000002655	-	98	55.392	ENSFHEG00000000678	-	70	54.545	Fundulus_heteroclitus
ENSIPUG00000002655	-	99	50.993	ENSGAFG00000020499	-	63	50.549	Gambusia_affinis
ENSIPUG00000002655	-	99	47.471	ENSGACG00000010352	si:ch211-207i20.2	62	49.275	Gasterosteus_aculeatus
ENSIPUG00000002655	-	99	41.481	ENSHBUG00000013296	-	99	42.922	Haplochromis_burtoni
ENSIPUG00000002655	-	96	53.968	ENSHBUG00000021003	-	95	52.000	Haplochromis_burtoni
ENSIPUG00000002655	-	99	54.545	ENSHBUG00000015166	-	80	54.545	Haplochromis_burtoni
ENSIPUG00000002655	-	98	51.304	ENSLBEG00000020128	-	99	49.239	Labrus_bergylta
ENSIPUG00000002655	-	96	50.521	ENSMMUG00000042578	ZNF32	90	53.254	Macaca_mulatta
ENSIPUG00000002655	-	97	46.809	ENSMAMG00000014734	-	53	46.809	Mastacembelus_armatus
ENSIPUG00000002655	-	98	52.885	ENSMZEG00005019918	-	93	52.577	Maylandia_zebra
ENSIPUG00000002655	-	98	45.756	ENSMZEG00005014592	-	90	46.259	Maylandia_zebra
ENSIPUG00000002655	-	99	40.496	ENSMZEG00005020156	-	79	43.350	Maylandia_zebra
ENSIPUG00000002655	-	98	55.435	ENSMZEG00005003336	-	78	48.077	Maylandia_zebra
ENSIPUG00000002655	-	97	45.794	ENSMZEG00005012715	-	75	45.679	Maylandia_zebra
ENSIPUG00000002655	-	98	53.633	ENSMZEG00005021052	-	73	53.633	Maylandia_zebra
ENSIPUG00000002655	-	98	50.746	ENSMZEG00005020162	-	73	51.515	Maylandia_zebra
ENSIPUG00000002655	-	98	54.286	ENSMZEG00005025343	-	80	54.286	Maylandia_zebra
ENSIPUG00000002655	-	98	56.436	ENSMZEG00005026082	-	74	56.436	Maylandia_zebra
ENSIPUG00000002655	-	98	55.195	ENSMZEG00005007262	-	98	55.195	Maylandia_zebra
ENSIPUG00000002655	-	98	49.761	ENSMMOG00000006131	-	92	47.500	Mola_mola
ENSIPUG00000002655	-	97	56.667	ENSMMOG00000010703	-	91	51.701	Mola_mola
ENSIPUG00000002655	-	98	51.948	ENSMMOG00000004460	-	96	48.438	Mola_mola
ENSIPUG00000002655	-	96	57.407	ENSMALG00000007051	-	99	53.082	Monopterus_albus
ENSIPUG00000002655	-	97	47.719	ENSMALG00000004216	-	61	49.038	Monopterus_albus
ENSIPUG00000002655	-	100	52.174	ENSMALG00000015655	-	100	49.770	Monopterus_albus
ENSIPUG00000002655	-	96	51.042	ENSMUSG00000059689	Zfp637	82	53.254	Mus_musculus
ENSIPUG00000002655	-	99	58.025	MGP_PahariEiJ_G0022533	Zfp637	82	53.254	Mus_pahari
ENSIPUG00000002655	-	95	58.065	MGP_SPRETEiJ_G0029809	Zfp637	82	53.254	Mus_spretus
ENSIPUG00000002655	-	99	53.061	ENSNGAG00000020281	Zfp637	90	53.254	Nannospalax_galili
ENSIPUG00000002655	-	98	56.410	ENSNBRG00000000523	-	66	56.410	Neolamprologus_brichardi
ENSIPUG00000002655	-	98	47.236	ENSNBRG00000005849	-	89	47.236	Neolamprologus_brichardi
ENSIPUG00000002655	-	97	50.000	ENSNBRG00000003000	-	82	51.316	Neolamprologus_brichardi
ENSIPUG00000002655	-	99	43.098	ENSNBRG00000005796	-	94	43.098	Neolamprologus_brichardi
ENSIPUG00000002655	-	97	44.608	ENSNBRG00000016564	-	81	44.608	Neolamprologus_brichardi
ENSIPUG00000002655	-	99	46.154	ENSNBRG00000005805	-	93	46.154	Neolamprologus_brichardi
ENSIPUG00000002655	-	99	48.571	ENSONIG00000015514	-	87	47.619	Oreochromis_niloticus
ENSIPUG00000002655	-	99	42.857	ENSONIG00000015552	-	90	43.643	Oreochromis_niloticus
ENSIPUG00000002655	-	98	46.821	ENSONIG00000005693	-	94	46.821	Oreochromis_niloticus
ENSIPUG00000002655	-	99	50.246	ENSOARG00000002999	ZNF32	82	53.254	Ovis_aries
ENSIPUG00000002655	-	98	44.348	ENSPLAG00000015973	-	100	44.348	Poecilia_latipinna
ENSIPUG00000002655	-	97	49.123	ENSPMEG00000006726	-	95	47.727	Poecilia_mexicana
ENSIPUG00000002655	-	94	53.365	ENSPMEG00000016458	-	99	48.344	Poecilia_mexicana
ENSIPUG00000002655	-	97	54.412	ENSPREG00000010437	-	81	55.372	Poecilia_reticulata
ENSIPUG00000002655	-	100	54.023	ENSPCAG00000005270	-	96	53.846	Procavia_capensis
ENSIPUG00000002655	-	98	56.356	ENSPVAG00000009430	-	79	57.971	Pteropus_vampyrus
ENSIPUG00000002655	-	98	48.649	ENSPNYG00000007597	-	94	48.649	Pundamilia_nyererei
ENSIPUG00000002655	-	96	56.757	ENSPNYG00000002684	-	89	56.757	Pundamilia_nyererei
ENSIPUG00000002655	-	98	62.147	ENSPNAG00000029997	-	98	61.111	Pygocentrus_nattereri
ENSIPUG00000002655	-	98	48.276	ENSSFOG00015015878	-	95	45.455	Scleropages_formosus
ENSIPUG00000002655	-	98	51.208	ENSSDUG00000015182	-	69	51.208	Seriola_dumerili
ENSIPUG00000002655	-	98	55.263	ENSSDUG00000015159	-	82	53.030	Seriola_dumerili
ENSIPUG00000002655	-	97	51.351	ENSSDUG00000015254	-	95	49.612	Seriola_dumerili
ENSIPUG00000002655	-	98	64.706	ENSSDUG00000008943	-	82	64.706	Seriola_dumerili
ENSIPUG00000002655	-	98	52.195	ENSSLDG00000018273	-	82	52.195	Seriola_lalandi_dorsalis
ENSIPUG00000002655	-	99	52.475	ENSSLDG00000020675	-	93	52.475	Seriola_lalandi_dorsalis
ENSIPUG00000002655	-	98	47.561	ENSSLDG00000012036	-	99	47.761	Seriola_lalandi_dorsalis
ENSIPUG00000002655	-	98	57.609	ENSSARG00000000532	-	85	57.609	Sorex_araneus
ENSIPUG00000002655	-	96	50.521	ENSSSCG00000010416	ZNF32	90	53.254	Sus_scrofa
ENSIPUG00000002655	-	100	49.831	ENSXCOG00000008116	-	99	49.831	Xiphophorus_couchianus