EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000002730 (Gene tree)
Gene ID: 108266326
Gene Symbol: tra2b
Alias: sfrs10|zgc:56612
Full Name: transformer-2 protein homolog beta-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 8317 bases
Position: chr6:105210-113526
Accession: 108266326
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000003860	RRM_1	PF00076.22	9.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000004041	-	4713	XM_017469440	ENSIPUP00000003860	260 (aa)	XP_017324929	A0A2D0R2Y3

Gene Model

Click here to download ENSIPUG00000002730's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000002730's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000002730	tra2b	58	79.762	ENSIPUG00000022183	TRA2B	62	94.017

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000002730	tra2b	58	87.500	ENSG00000136527	TRA2B	61	91.228	Homo_sapiens
ENSIPUG00000002730	tra2b	77	68.000	ENSAPOG00000023727	-	67	77.320	Acanthochromis_polyacanthus
ENSIPUG00000002730	tra2b	71	68.085	ENSACIG00000001289	TRA2B	74	75.500	Amphilophus_citrinellus
ENSIPUG00000002730	tra2b	58	80.982	ENSATEG00000009454	-	66	90.756	Anabas_testudineus
ENSIPUG00000002730	tra2b	58	86.184	ENSANAG00000022734	TRA2B	61	91.228	Aotus_nancymaae
ENSIPUG00000002730	tra2b	77	72.414	ENSACLG00000015461	TRA2B	72	71.220	Astatotilapia_calliptera
ENSIPUG00000002730	tra2b	52	79.245	ENSAMXG00000003627	tra2b	66	83.673	Astyanax_mexicanus
ENSIPUG00000002730	tra2b	59	84.277	ENSAMXG00000039469	TRA2B	69	90.083	Astyanax_mexicanus
ENSIPUG00000002730	tra2b	66	74.093	ENSCAFG00020013881	-	61	85.965	Canis_lupus_dingo
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000008718	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000010734	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000019491	-	60	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.247	ENSCHIG00000008979	-	61	86.842	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.247	ENSCHIG00000005100	-	61	86.842	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.247	ENSCHIG00000013046	-	61	86.842	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000019955	-	60	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.247	ENSCHIG00000008466	-	61	86.842	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000003352	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000020231	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000020233	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	53	84.173	ENSCHIG00000001240	-	50	87.826	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000003420	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000012231	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000011760	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000008518	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.247	ENSCHIG00000005767	-	61	86.842	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000007703	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000020262	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000006534	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000019807	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	58	73.256	ENSCHIG00000019439	-	61	86.842	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000001315	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000018948	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000010995	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000008819	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	60	84.615	ENSCHIG00000000669	-	50	87.826	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.247	ENSCHIG00000019055	-	61	86.842	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.247	ENSCHIG00000008446	-	60	86.842	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000009149	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.247	ENSCHIG00000020212	-	61	86.842	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000004055	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000002169	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000018836	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000019157	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	60	84.076	ENSCHIG00000000044	-	67	86.842	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000020157	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000002457	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000009569	-	60	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000019876	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000013051	-	60	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	58	75.658	ENSCHIG00000012096	-	63	60.526	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000001726	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.247	ENSCHIG00000010243	-	61	86.842	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.247	ENSCHIG00000018730	-	61	86.842	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000007726	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	53	84.173	ENSCHIG00000018681	-	50	87.826	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000019163	-	60	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000008052	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.247	ENSCHIG00000007642	-	61	86.842	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000000760	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000005846	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000019647	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.247	ENSCHIG00000018769	-	61	86.842	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000019918	-	60	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.247	ENSCHIG00000005918	-	61	86.842	Capra_hircus
ENSIPUG00000002730	tra2b	58	74.342	ENSCHIG00000024800	-	71	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000019894	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.247	ENSCHIG00000019996	-	61	86.842	Capra_hircus
ENSIPUG00000002730	tra2b	53	84.173	ENSCHIG00000019564	-	50	87.826	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000010526	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000019487	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000003818	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.247	ENSCHIG00000002146	-	61	86.842	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.247	ENSCHIG00000012070	-	61	86.842	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000019676	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	61	81.366	ENSCHIG00000023651	-	65	84.112	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.247	ENSCHIG00000018752	-	61	86.842	Capra_hircus
ENSIPUG00000002730	tra2b	53	83.212	ENSCHIG00000018954	-	51	86.957	Capra_hircus
ENSIPUG00000002730	tra2b	56	87.671	ENSCHIG00000018541	-	61	91.228	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000020024	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.247	ENSCHIG00000019538	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000003630	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000018787	-	60	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000018907	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000008520	-	60	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	82.192	ENSCHIG00000014653	-	62	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.247	ENSCHIG00000019012	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000019019	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000019837	-	60	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000006712	-	61	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.247	ENSCHIG00000019653	-	61	86.842	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.247	ENSCHIG00000019282	-	60	86.842	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.932	ENSCHIG00000008119	-	60	87.719	Capra_hircus
ENSIPUG00000002730	tra2b	56	84.247	ENSCHIG00000020200	-	61	86.842	Capra_hircus
ENSIPUG00000002730	tra2b	58	87.500	ENSTSYG00000000652	-	61	91.228	Carlito_syrichta
ENSIPUG00000002730	tra2b	58	87.500	ENSCCAG00000021227	TRA2B	61	91.228	Cebus_capucinus
ENSIPUG00000002730	tra2b	58	87.500	ENSCATG00000040153	TRA2B	61	91.228	Cercocebus_atys
ENSIPUG00000002730	tra2b	58	87.500	ENSCLAG00000015607	TRA2B	61	91.228	Chinchilla_lanigera
ENSIPUG00000002730	tra2b	82	64.019	ENSCSEG00000002877	TRA2B	63	88.793	Cynoglossus_semilaevis
ENSIPUG00000002730	tra2b	92	72.764	ENSCSEG00000011697	-	67	91.597	Cynoglossus_semilaevis
ENSIPUG00000002730	tra2b	87	62.295	ENSCVAG00000003909	-	67	76.289	Cyprinodon_variegatus
ENSIPUG00000002730	tra2b	71	66.129	ENSCVAG00000004587	TRA2B	73	70.443	Cyprinodon_variegatus
ENSIPUG00000002730	tra2b	58	87.500	ENSDORG00000026038	-	61	91.228	Dipodomys_ordii
ENSIPUG00000002730	tra2b	59	70.520	ENSDORG00000027971	-	85	63.522	Dipodomys_ordii
ENSIPUG00000002730	tra2b	56	53.205	ENSETEG00000007370	-	65	57.812	Echinops_telfairi
ENSIPUG00000002730	tra2b	58	67.066	ENSEBUG00000005001	tra2b	62	78.947	Eptatretus_burgeri
ENSIPUG00000002730	tra2b	94	58.984	ENSELUG00000010705	tra2b	63	67.442	Esox_lucius
ENSIPUG00000002730	tra2b	92	64.982	ENSELUG00000010477	-	60	91.453	Esox_lucius
ENSIPUG00000002730	tra2b	87	70.886	ENSFHEG00000009235	TRA2B	64	89.908	Fundulus_heteroclitus
ENSIPUG00000002730	tra2b	87	65.066	ENSGAFG00000019729	-	69	74.490	Gambusia_affinis
ENSIPUG00000002730	tra2b	78	66.995	ENSGACG00000010109	TRA2B	70	75.130	Gasterosteus_aculeatus
ENSIPUG00000002730	tra2b	58	87.500	ENSGGOG00000009844	TRA2B	61	91.228	Gorilla_gorilla
ENSIPUG00000002730	tra2b	77	70.098	ENSHBUG00000003145	TRA2B	72	70.732	Haplochromis_burtoni
ENSIPUG00000002730	tra2b	66	72.222	ENSHGLG00100001298	-	65	83.333	Heterocephalus_glaber_male
ENSIPUG00000002730	tra2b	58	87.500	ENSSTOG00000006720	TRA2B	61	91.228	Ictidomys_tridecemlineatus
ENSIPUG00000002730	tra2b	58	87.500	ENSJJAG00000011893	Tra2b	61	91.228	Jaculus_jaculus
ENSIPUG00000002730	tra2b	54	78.767	ENSKMAG00000012538	-	65	74.227	Kryptolebias_marmoratus
ENSIPUG00000002730	tra2b	53	79.054	ENSLBEG00000023163	TRA2B	69	89.516	Labrus_bergylta
ENSIPUG00000002730	tra2b	58	87.500	ENSMMUG00000001185	TRA2B	61	91.228	Macaca_mulatta
ENSIPUG00000002730	tra2b	58	87.500	ENSMNEG00000034273	TRA2B	61	91.228	Macaca_nemestrina
ENSIPUG00000002730	tra2b	57	85.034	ENSMAMG00000003753	TRA2B	65	91.597	Mastacembelus_armatus
ENSIPUG00000002730	tra2b	77	72.414	ENSMZEG00005007817	TRA2B	72	71.220	Maylandia_zebra
ENSIPUG00000002730	tra2b	53	86.957	ENSMAUG00000002746	-	58	90.566	Mesocricetus_auratus
ENSIPUG00000002730	tra2b	58	86.842	ENSMICG00000048969	TRA2B	61	91.228	Microcebus_murinus
ENSIPUG00000002730	tra2b	77	67.150	ENSMMOG00000003829	TRA2B	68	74.519	Mola_mola
ENSIPUG00000002730	tra2b	75	63.636	ENSMODG00000009767	-	60	86.486	Monodelphis_domestica
ENSIPUG00000002730	tra2b	87	68.240	ENSMALG00000017740	-	66	73.196	Monopterus_albus
ENSIPUG00000002730	tra2b	58	87.500	ENSMUSG00000022858	Tra2b	61	91.228	Mus_musculus
ENSIPUG00000002730	tra2b	58	87.500	ENSNGAG00000011398	Tra2b	61	91.228	Nannospalax_galili
ENSIPUG00000002730	tra2b	75	73.196	ENSNBRG00000016092	TRA2B	76	70.098	Neolamprologus_brichardi
ENSIPUG00000002730	tra2b	58	76.074	ENSORLG00000016554	tra2b	71	72.549	Oryzias_latipes
ENSIPUG00000002730	tra2b	77	66.332	ENSORLG00000013780	tra2a	68	73.711	Oryzias_latipes
ENSIPUG00000002730	tra2b	58	77.576	ENSORLG00020001514	TRA2B	75	69.907	Oryzias_latipes_hni
ENSIPUG00000002730	tra2b	77	66.332	ENSORLG00020015339	tra2a	68	73.711	Oryzias_latipes_hni
ENSIPUG00000002730	tra2b	58	76.074	ENSORLG00015001690	TRA2B	71	72.059	Oryzias_latipes_hsok
ENSIPUG00000002730	tra2b	77	65.174	ENSORLG00015013848	-	68	79.082	Oryzias_latipes_hsok
ENSIPUG00000002730	tra2b	59	76.970	ENSOMEG00000000738	TRA2B	64	90.598	Oryzias_melastigma
ENSIPUG00000002730	tra2b	77	64.677	ENSOMEG00000012826	-	62	78.788	Oryzias_melastigma
ENSIPUG00000002730	tra2b	58	87.500	ENSPPAG00000034619	TRA2B	61	91.228	Pan_paniscus
ENSIPUG00000002730	tra2b	58	87.500	ENSPTRG00000015707	TRA2B	61	91.228	Pan_troglodytes
ENSIPUG00000002730	tra2b	56	84.314	ENSPKIG00000009810	tra2b	71	77.500	Paramormyrops_kingsleyae
ENSIPUG00000002730	tra2b	58	87.500	ENSPEMG00000020933	-	61	91.228	Peromyscus_maniculatus_bairdii
ENSIPUG00000002730	tra2b	62	62.371	ENSPMAG00000002818	tra2b	61	63.243	Petromyzon_marinus
ENSIPUG00000002730	tra2b	87	56.769	ENSPLAG00000016709	-	58	92.308	Poecilia_latipinna
ENSIPUG00000002730	tra2b	87	62.041	ENSPMEG00000015960	-	56	76.804	Poecilia_mexicana
ENSIPUG00000002730	tra2b	87	55.507	ENSPREG00000005879	-	66	83.158	Poecilia_reticulata
ENSIPUG00000002730	tra2b	58	86.842	ENSPCOG00000019183	TRA2B	61	91.228	Propithecus_coquereli
ENSIPUG00000002730	tra2b	77	70.098	ENSPNYG00000001238	TRA2B	72	70.732	Pundamilia_nyererei
ENSIPUG00000002730	tra2b	92	68.980	ENSPNAG00000002946	tra2b	73	80.693	Pygocentrus_nattereri
ENSIPUG00000002730	tra2b	58	87.500	ENSRBIG00000042036	TRA2B	61	91.228	Rhinopithecus_bieti
ENSIPUG00000002730	tra2b	58	87.500	ENSRROG00000035427	TRA2B	61	91.228	Rhinopithecus_roxellana
ENSIPUG00000002730	tra2b	58	87.500	ENSSBOG00000034804	TRA2B	61	91.228	Saimiri_boliviensis_boliviensis
ENSIPUG00000002730	tra2b	92	69.323	ENSSFOG00015007738	tra2b	77	79.500	Scleropages_formosus
ENSIPUG00000002730	tra2b	92	64.643	ENSSMAG00000010614	TRA2B	66	75.000	Scophthalmus_maximus
ENSIPUG00000002730	tra2b	77	75.500	ENSSMAG00000017702	-	65	82.653	Scophthalmus_maximus
ENSIPUG00000002730	tra2b	77	67.500	ENSSDUG00000013749	-	66	76.531	Seriola_dumerili
ENSIPUG00000002730	tra2b	77	67.500	ENSSLDG00000014631	-	66	76.531	Seriola_lalandi_dorsalis
ENSIPUG00000002730	tra2b	74	75.648	ENSSPAG00000021124	-	78	76.166	Stegastes_partitus
ENSIPUG00000002730	tra2b	56	80.822	ENSTRUG00000015168	tra2b	63	91.228	Takifugu_rubripes
ENSIPUG00000002730	tra2b	89	67.089	ENSTNIG00000017210	tra2b	67	71.429	Tetraodon_nigroviridis
ENSIPUG00000002730	tra2b	53	81.560	ENSXCOG00000014119	tra2b	61	89.286	Xiphophorus_couchianus
ENSIPUG00000002730	tra2b	53	81.560	ENSXMAG00000009835	-	60	91.453	Xiphophorus_maculatus