EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000002754 (Gene tree)
Gene ID: 108277869
Gene Symbol: farsb
Alias: cb428|farsl|zgc:92055
Full Name: phenylalanyl-tRNA synthetase subunit beta
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 13702 bases
Position: chr17:14142671-14156372
Accession: 108277869
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000003921	B3_4	PF03483.17	2.7e-26	1	1
ENSIPUP00000003938	B3_4	PF03483.17	2.2e-25	1	1
ENSIPUP00000003921	B5	PF03484.15	1.8e-14	1	1
ENSIPUP00000003938	B5	PF03484.15	1.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000004106	-	2318	XM_017490868	ENSIPUP00000003921	589 (aa)	XP_017346357	A0A2D0SUI6
ENSIPUT00000004126	-	1767	-	ENSIPUP00000003938	588 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000002754's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000002754's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000002754	farsb	100	76.949	ENSG00000116120	FARSB	100	76.949	Homo_sapiens
ENSIPUG00000002754	farsb	100	83.022	ENSAPOG00000013072	farsb	100	78.268	Acanthochromis_polyacanthus
ENSIPUG00000002754	farsb	100	77.458	ENSAMEG00000005984	FARSB	100	77.458	Ailuropoda_melanoleuca
ENSIPUG00000002754	farsb	100	79.966	ENSACIG00000021623	farsb	100	79.966	Amphilophus_citrinellus
ENSIPUG00000002754	farsb	100	82.683	ENSAOCG00000004912	farsb	100	79.626	Amphiprion_ocellaris
ENSIPUG00000002754	farsb	100	82.683	ENSAPEG00000001153	farsb	100	77.929	Amphiprion_percula
ENSIPUG00000002754	farsb	100	83.531	ENSATEG00000021441	farsb	70	83.531	Anabas_testudineus
ENSIPUG00000002754	farsb	99	76.158	ENSAPLG00000010292	FARSB	99	76.158	Anas_platyrhynchos
ENSIPUG00000002754	farsb	100	75.552	ENSACAG00000004769	FARSB	98	75.552	Anolis_carolinensis
ENSIPUG00000002754	farsb	100	76.610	ENSANAG00000024637	FARSB	100	76.610	Aotus_nancymaae
ENSIPUG00000002754	farsb	100	83.871	ENSACLG00000013951	farsb	100	81.979	Astatotilapia_calliptera
ENSIPUG00000002754	farsb	85	86.774	ENSAMXG00000033881	farsb	100	86.774	Astyanax_mexicanus
ENSIPUG00000002754	farsb	96	75.752	ENSBTAG00000045523	-	100	75.752	Bos_taurus
ENSIPUG00000002754	farsb	100	77.119	ENSBTAG00000011649	FARSB	100	77.119	Bos_taurus
ENSIPUG00000002754	farsb	100	57.264	WBGene00001498	fars-3	100	57.264	Caenorhabditis_elegans
ENSIPUG00000002754	farsb	100	77.288	ENSCJAG00000012181	FARSB	100	77.288	Callithrix_jacchus
ENSIPUG00000002754	farsb	100	77.627	ENSCAFG00000016094	-	100	77.627	Canis_familiaris
ENSIPUG00000002754	farsb	100	74.788	ENSCAFG00020026684	FARSB	100	76.773	Canis_lupus_dingo
ENSIPUG00000002754	farsb	100	77.458	ENSCHIG00000014275	FARSB	100	77.458	Capra_hircus
ENSIPUG00000002754	farsb	100	76.780	ENSTSYG00000008461	FARSB	100	76.780	Carlito_syrichta
ENSIPUG00000002754	farsb	96	69.739	ENSCAPG00000016436	FARSB	99	69.739	Cavia_aperea
ENSIPUG00000002754	farsb	100	76.610	ENSCPOG00000013109	FARSB	100	76.610	Cavia_porcellus
ENSIPUG00000002754	farsb	100	73.051	ENSCCAG00000025840	FARSB	100	73.051	Cebus_capucinus
ENSIPUG00000002754	farsb	100	76.949	ENSCATG00000036168	FARSB	100	76.949	Cercocebus_atys
ENSIPUG00000002754	farsb	100	76.949	ENSCLAG00000011954	FARSB	100	76.949	Chinchilla_lanigera
ENSIPUG00000002754	farsb	100	76.949	ENSCSAG00000007806	FARSB	100	76.949	Chlorocebus_sabaeus
ENSIPUG00000002754	farsb	81	89.888	ENSCHOG00000011785	FARSB	81	89.888	Choloepus_hoffmanni
ENSIPUG00000002754	farsb	100	77.589	ENSCPBG00000019346	FARSB	98	77.589	Chrysemys_picta_bellii
ENSIPUG00000002754	farsb	99	60.469	ENSCING00000004180	-	99	60.469	Ciona_intestinalis
ENSIPUG00000002754	farsb	99	61.873	ENSCSAVG00000005346	-	99	61.873	Ciona_savignyi
ENSIPUG00000002754	farsb	97	75.965	ENSCANG00000036239	FARSB	100	75.965	Colobus_angolensis_palliatus
ENSIPUG00000002754	farsb	100	77.797	ENSCGRG00001022928	Farsb	100	77.797	Cricetulus_griseus_chok1gshd
ENSIPUG00000002754	farsb	100	77.797	ENSCGRG00000001513	Farsb	100	77.797	Cricetulus_griseus_crigri
ENSIPUG00000002754	farsb	100	84.211	ENSCSEG00000005415	farsb	95	84.211	Cynoglossus_semilaevis
ENSIPUG00000002754	farsb	76	81.111	ENSCVAG00000018815	farsb	98	81.111	Cyprinodon_variegatus
ENSIPUG00000002754	farsb	100	87.627	ENSDARG00000016864	farsb	100	87.627	Danio_rerio
ENSIPUG00000002754	farsb	100	74.576	ENSDNOG00000002511	FARSB	100	74.576	Dasypus_novemcinctus
ENSIPUG00000002754	farsb	100	76.610	ENSDORG00000011102	Farsb	100	76.610	Dipodomys_ordii
ENSIPUG00000002754	farsb	100	62.458	FBgn0039175	beta-PheRS	100	62.458	Drosophila_melanogaster
ENSIPUG00000002754	farsb	97	74.211	ENSETEG00000015080	FARSB	100	74.211	Echinops_telfairi
ENSIPUG00000002754	farsb	100	68.305	ENSEBUG00000006846	farsb	100	68.305	Eptatretus_burgeri
ENSIPUG00000002754	farsb	100	77.119	ENSEASG00005011297	FARSB	100	77.119	Equus_asinus_asinus
ENSIPUG00000002754	farsb	100	74.468	ENSECAG00000023086	FARSB	99	77.615	Equus_caballus
ENSIPUG00000002754	farsb	91	68.085	ENSEEUG00000007441	FARSB	91	68.085	Erinaceus_europaeus
ENSIPUG00000002754	farsb	97	86.515	ENSELUG00000014767	farsb	99	86.515	Esox_lucius
ENSIPUG00000002754	farsb	100	77.627	ENSFCAG00000026772	FARSB	100	77.627	Felis_catus
ENSIPUG00000002754	farsb	97	75.923	ENSFALG00000006739	FARSB	96	75.923	Ficedula_albicollis
ENSIPUG00000002754	farsb	100	76.949	ENSFDAG00000008871	FARSB	100	76.949	Fukomys_damarensis
ENSIPUG00000002754	farsb	100	84.041	ENSFHEG00000020939	farsb	98	84.074	Fundulus_heteroclitus
ENSIPUG00000002754	farsb	92	82.931	ENSGMOG00000013047	farsb	99	82.931	Gadus_morhua
ENSIPUG00000002754	farsb	100	75.891	ENSGALG00000005236	FARSB	100	75.891	Gallus_gallus
ENSIPUG00000002754	farsb	100	82.173	ENSGAFG00000020900	farsb	100	71.477	Gambusia_affinis
ENSIPUG00000002754	farsb	92	84.045	ENSGACG00000000261	farsb	99	84.045	Gasterosteus_aculeatus
ENSIPUG00000002754	farsb	100	77.759	ENSGAGG00000016575	FARSB	98	77.759	Gopherus_agassizii
ENSIPUG00000002754	farsb	100	83.701	ENSHBUG00000022379	farsb	100	81.324	Haplochromis_burtoni
ENSIPUG00000002754	farsb	100	76.949	ENSHGLG00000015965	FARSB	100	76.949	Heterocephalus_glaber_female
ENSIPUG00000002754	farsb	100	76.949	ENSHGLG00100001035	FARSB	100	76.949	Heterocephalus_glaber_male
ENSIPUG00000002754	farsb	91	75.373	ENSHCOG00000016462	farsb	100	75.373	Hippocampus_comes
ENSIPUG00000002754	farsb	100	77.288	ENSSTOG00000016169	FARSB	100	77.288	Ictidomys_tridecemlineatus
ENSIPUG00000002754	farsb	100	77.797	ENSJJAG00000003267	Farsb	100	77.797	Jaculus_jaculus
ENSIPUG00000002754	farsb	100	74.831	ENSKMAG00000005363	farsb	100	74.831	Kryptolebias_marmoratus
ENSIPUG00000002754	farsb	100	82.852	ENSLBEG00000018127	farsb	70	82.852	Labrus_bergylta
ENSIPUG00000002754	farsb	100	80.645	ENSLACG00000002551	FARSB	100	80.645	Latimeria_chalumnae
ENSIPUG00000002754	farsb	100	83.362	ENSLOCG00000004136	farsb	100	83.362	Lepisosteus_oculatus
ENSIPUG00000002754	farsb	100	76.102	ENSLAFG00000015659	FARSB	100	76.102	Loxodonta_africana
ENSIPUG00000002754	farsb	100	76.780	ENSMFAG00000036645	FARSB	100	76.780	Macaca_fascicularis
ENSIPUG00000002754	farsb	100	74.068	ENSMMUG00000007685	FARSB	100	74.068	Macaca_mulatta
ENSIPUG00000002754	farsb	100	76.780	ENSMNEG00000030672	FARSB	100	76.780	Macaca_nemestrina
ENSIPUG00000002754	farsb	100	76.949	ENSMLEG00000042060	FARSB	100	76.949	Mandrillus_leucophaeus
ENSIPUG00000002754	farsb	100	83.022	ENSMAMG00000011835	farsb	100	76.401	Mastacembelus_armatus
ENSIPUG00000002754	farsb	96	81.947	ENSMZEG00005004544	farsb	100	81.947	Maylandia_zebra
ENSIPUG00000002754	farsb	95	74.776	ENSMGAG00000004670	FARSB	100	74.776	Meleagris_gallopavo
ENSIPUG00000002754	farsb	72	72.414	ENSMAUG00000017805	Farsb	99	72.414	Mesocricetus_auratus
ENSIPUG00000002754	farsb	100	77.966	ENSMICG00000002495	FARSB	100	77.966	Microcebus_murinus
ENSIPUG00000002754	farsb	100	78.098	ENSMOCG00000003181	Farsb	100	78.098	Microtus_ochrogaster
ENSIPUG00000002754	farsb	100	74.703	ENSMMOG00000006265	farsb	100	74.703	Mola_mola
ENSIPUG00000002754	farsb	100	78.098	ENSMODG00000021192	FARSB	100	78.098	Monodelphis_domestica
ENSIPUG00000002754	farsb	94	83.303	ENSMALG00000021188	farsb	92	83.303	Monopterus_albus
ENSIPUG00000002754	farsb	100	78.136	MGP_CAROLIEiJ_G0014310	Farsb	100	78.136	Mus_caroli
ENSIPUG00000002754	farsb	100	78.136	ENSMUSG00000026245	Farsb	100	78.136	Mus_musculus
ENSIPUG00000002754	farsb	100	77.797	MGP_PahariEiJ_G0027548	Farsb	100	77.797	Mus_pahari
ENSIPUG00000002754	farsb	100	78.136	MGP_SPRETEiJ_G0015116	Farsb	100	78.136	Mus_spretus
ENSIPUG00000002754	farsb	100	77.119	ENSMPUG00000016677	FARSB	100	77.119	Mustela_putorius_furo
ENSIPUG00000002754	farsb	100	77.797	ENSMLUG00000010904	FARSB	100	77.797	Myotis_lucifugus
ENSIPUG00000002754	farsb	100	76.740	ENSNGAG00000014602	Farsb	100	76.740	Nannospalax_galili
ENSIPUG00000002754	farsb	100	83.871	ENSNBRG00000003198	farsb	100	78.983	Neolamprologus_brichardi
ENSIPUG00000002754	farsb	100	77.119	ENSNLEG00000009638	FARSB	100	77.119	Nomascus_leucogenys
ENSIPUG00000002754	farsb	100	68.251	ENSMEUG00000010798	FARSB	100	68.251	Notamacropus_eugenii
ENSIPUG00000002754	farsb	100	57.966	ENSOPRG00000003292	FARSB	100	57.966	Ochotona_princeps
ENSIPUG00000002754	farsb	100	76.441	ENSODEG00000005451	FARSB	100	76.441	Octodon_degus
ENSIPUG00000002754	farsb	100	83.701	ENSONIG00000014639	farsb	100	83.701	Oreochromis_niloticus
ENSIPUG00000002754	farsb	91	77.383	ENSOANG00000015387	FARSB	100	77.383	Ornithorhynchus_anatinus
ENSIPUG00000002754	farsb	91	77.551	ENSOCUG00000007828	FARSB	94	77.551	Oryctolagus_cuniculus
ENSIPUG00000002754	farsb	100	83.701	ENSORLG00000009135	farsb	100	81.154	Oryzias_latipes
ENSIPUG00000002754	farsb	100	83.531	ENSORLG00015001072	farsb	100	73.854	Oryzias_latipes_hsok
ENSIPUG00000002754	farsb	100	83.701	ENSOMEG00000019009	farsb	100	79.457	Oryzias_melastigma
ENSIPUG00000002754	farsb	100	72.074	ENSOGAG00000010125	FARSB	100	72.074	Otolemur_garnettii
ENSIPUG00000002754	farsb	100	77.458	ENSOARG00000020329	FARSB	100	77.458	Ovis_aries
ENSIPUG00000002754	farsb	100	77.119	ENSPPAG00000039268	FARSB	100	77.119	Pan_paniscus
ENSIPUG00000002754	farsb	100	77.458	ENSPPRG00000010687	FARSB	100	77.458	Panthera_pardus
ENSIPUG00000002754	farsb	100	77.119	ENSPTIG00000004299	FARSB	100	77.119	Panthera_tigris_altaica
ENSIPUG00000002754	farsb	100	77.119	ENSPTRG00000012974	FARSB	100	77.119	Pan_troglodytes
ENSIPUG00000002754	farsb	100	76.949	ENSPANG00000016304	FARSB	100	76.949	Papio_anubis
ENSIPUG00000002754	farsb	100	85.059	ENSPKIG00000006661	farsb	100	85.059	Paramormyrops_kingsleyae
ENSIPUG00000002754	farsb	99	75.980	ENSPSIG00000006248	FARSB	99	75.980	Pelodiscus_sinensis
ENSIPUG00000002754	farsb	83	80.368	ENSPMGG00000002815	farsb	100	80.368	Periophthalmus_magnuspinnatus
ENSIPUG00000002754	farsb	100	76.780	ENSPEMG00000003131	Farsb	100	76.780	Peromyscus_maniculatus_bairdii
ENSIPUG00000002754	farsb	100	77.929	ENSPCIG00000019458	FARSB	100	77.929	Phascolarctos_cinereus
ENSIPUG00000002754	farsb	100	82.852	ENSPLAG00000001104	farsb	100	75.398	Poecilia_latipinna
ENSIPUG00000002754	farsb	100	83.192	ENSPMEG00000017658	farsb	100	75.752	Poecilia_mexicana
ENSIPUG00000002754	farsb	100	82.683	ENSPREG00000010583	farsb	100	75.722	Poecilia_reticulata
ENSIPUG00000002754	farsb	100	77.119	ENSPPYG00000013221	FARSB	100	77.119	Pongo_abelii
ENSIPUG00000002754	farsb	85	67.600	ENSPCAG00000002757	FARSB	85	67.600	Procavia_capensis
ENSIPUG00000002754	farsb	66	92.857	ENSPCOG00000028852	FARSB	100	92.857	Propithecus_coquereli
ENSIPUG00000002754	farsb	100	77.119	ENSPVAG00000006985	FARSB	100	77.119	Pteropus_vampyrus
ENSIPUG00000002754	farsb	100	72.156	ENSPNYG00000011433	farsb	100	72.156	Pundamilia_nyererei
ENSIPUG00000002754	farsb	100	90.832	ENSPNAG00000021802	farsb	100	90.832	Pygocentrus_nattereri
ENSIPUG00000002754	farsb	100	77.797	ENSRNOG00000014119	Farsb	100	77.797	Rattus_norvegicus
ENSIPUG00000002754	farsb	92	77.716	ENSRBIG00000033191	FARSB	98	77.248	Rhinopithecus_bieti
ENSIPUG00000002754	farsb	100	76.949	ENSRROG00000029388	FARSB	100	76.949	Rhinopithecus_roxellana
ENSIPUG00000002754	farsb	100	45.738	YLR060W	FRS1	100	45.738	Saccharomyces_cerevisiae
ENSIPUG00000002754	farsb	100	70.339	ENSSBOG00000019084	FARSB	100	70.339	Saimiri_boliviensis_boliviensis
ENSIPUG00000002754	farsb	92	72.477	ENSSHAG00000015752	FARSB	99	72.477	Sarcophilus_harrisii
ENSIPUG00000002754	farsb	100	81.494	ENSSFOG00015007850	farsb	100	81.494	Scleropages_formosus
ENSIPUG00000002754	farsb	100	84.211	ENSSMAG00000020668	farsb	100	82.173	Scophthalmus_maximus
ENSIPUG00000002754	farsb	100	83.531	ENSSDUG00000009685	farsb	100	79.019	Seriola_dumerili
ENSIPUG00000002754	farsb	100	83.531	ENSSLDG00000025206	farsb	100	79.457	Seriola_lalandi_dorsalis
ENSIPUG00000002754	farsb	61	77.551	ENSSARG00000005655	-	66	77.551	Sorex_araneus
ENSIPUG00000002754	farsb	95	72.371	ENSSPUG00000002245	FARSB	100	72.371	Sphenodon_punctatus
ENSIPUG00000002754	farsb	100	83.192	ENSSPAG00000007367	farsb	69	83.192	Stegastes_partitus
ENSIPUG00000002754	farsb	100	77.288	ENSSSCG00000016226	-	100	77.288	Sus_scrofa
ENSIPUG00000002754	farsb	100	71.186	ENSSSCG00000032016	-	100	71.186	Sus_scrofa
ENSIPUG00000002754	farsb	97	75.395	ENSTGUG00000007788	FARSB	99	75.395	Taeniopygia_guttata
ENSIPUG00000002754	farsb	100	80.306	ENSTRUG00000009483	farsb	70	80.306	Takifugu_rubripes
ENSIPUG00000002754	farsb	100	80.475	ENSTNIG00000014310	farsb	100	80.475	Tetraodon_nigroviridis
ENSIPUG00000002754	farsb	100	51.783	ENSTBEG00000003136	FARSB	100	51.783	Tupaia_belangeri
ENSIPUG00000002754	farsb	88	77.387	ENSTTRG00000009082	FARSB	88	77.387	Tursiops_truncatus
ENSIPUG00000002754	farsb	85	73.253	ENSUAMG00000024613	FARSB	99	73.253	Ursus_americanus
ENSIPUG00000002754	farsb	100	77.627	ENSUMAG00000017995	FARSB	100	77.627	Ursus_maritimus
ENSIPUG00000002754	farsb	92	74.908	ENSVPAG00000006844	FARSB	100	74.908	Vicugna_pacos
ENSIPUG00000002754	farsb	100	77.627	ENSVVUG00000024025	FARSB	100	77.627	Vulpes_vulpes
ENSIPUG00000002754	farsb	100	75.254	ENSXETG00000002934	farsb	100	75.254	Xenopus_tropicalis
ENSIPUG00000002754	farsb	100	82.343	ENSXMAG00000008280	farsb	100	71.986	Xiphophorus_maculatus