EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000002798 (Gene tree)
Gene ID: 100528870
Gene Symbol: nup35
Alias: nup53
Full Name: nucleoporin 35
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 5717 bases
Position: chr6:119207-124923
Accession: 100528870
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000004043	Nup35_RRM	PF05172.13	1.1e-26	1	1
ENSIPUP00000004022	Nup35_RRM	PF05172.13	1.1e-26	1	1
ENSIPUP00000004043	Nup35_RRM_2	PF14605.6	9.2e-11	1	1
ENSIPUP00000004022	Nup35_RRM_2	PF14605.6	9.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000004237	-	924	-	ENSIPUP00000004043	307 (aa)	-	-
ENSIPUT00000004214	-	1416	XM_017469041	ENSIPUP00000004022	311 (aa)	XP_017324530	A0A2D0R3Z8

Gene Model

Click here to download ENSIPUG00000002798's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000002798's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000002798	nup35	100	67.791	ENSG00000163002	NUP35	100	71.053	Homo_sapiens
ENSIPUG00000002798	nup35	100	63.578	ENSAPOG00000003630	nup35	100	63.578	Acanthochromis_polyacanthus
ENSIPUG00000002798	nup35	100	67.477	ENSAMEG00000001191	NUP35	100	67.477	Ailuropoda_melanoleuca
ENSIPUG00000002798	nup35	83	64.706	ENSACIG00000023984	nup35	99	64.706	Amphilophus_citrinellus
ENSIPUG00000002798	nup35	100	63.898	ENSAOCG00000007484	nup35	100	63.898	Amphiprion_ocellaris
ENSIPUG00000002798	nup35	100	63.898	ENSAPEG00000020027	nup35	100	63.898	Amphiprion_percula
ENSIPUG00000002798	nup35	98	67.219	ENSATEG00000019305	nup35	100	65.176	Anabas_testudineus
ENSIPUG00000002798	nup35	98	70.192	ENSAPLG00000009161	NUP35	95	70.192	Anas_platyrhynchos
ENSIPUG00000002798	nup35	98	68.065	ENSACAG00000008692	NUP35	95	67.834	Anolis_carolinensis
ENSIPUG00000002798	nup35	100	67.178	ENSANAG00000021090	NUP35	100	67.178	Aotus_nancymaae
ENSIPUG00000002798	nup35	100	63.492	ENSACLG00000013918	nup35	100	63.492	Astatotilapia_calliptera
ENSIPUG00000002798	nup35	100	75.235	ENSAMXG00000003371	nup35	100	77.049	Astyanax_mexicanus
ENSIPUG00000002798	nup35	100	67.890	ENSBTAG00000009777	NUP35	100	67.890	Bos_taurus
ENSIPUG00000002798	nup35	100	67.485	ENSCJAG00000011104	NUP35	100	67.485	Callithrix_jacchus
ENSIPUG00000002798	nup35	97	68.910	ENSCAFG00000031849	NUP35	100	68.910	Canis_familiaris
ENSIPUG00000002798	nup35	100	66.869	ENSCAFG00020008408	NUP35	100	66.869	Canis_lupus_dingo
ENSIPUG00000002798	nup35	97	69.677	ENSCHIG00000023148	NUP35	100	69.677	Capra_hircus
ENSIPUG00000002798	nup35	100	67.791	ENSTSYG00000002117	NUP35	100	67.791	Carlito_syrichta
ENSIPUG00000002798	nup35	98	56.013	ENSCAPG00000005703	NUP35	97	56.329	Cavia_aperea
ENSIPUG00000002798	nup35	98	69.453	ENSCPOG00000011906	NUP35	97	70.418	Cavia_porcellus
ENSIPUG00000002798	nup35	100	67.485	ENSCCAG00000025009	NUP35	100	67.485	Cebus_capucinus
ENSIPUG00000002798	nup35	100	57.407	ENSCATG00000033109	NUP35	100	57.407	Cercocebus_atys
ENSIPUG00000002798	nup35	98	69.453	ENSCLAG00000012559	NUP35	95	70.096	Chinchilla_lanigera
ENSIPUG00000002798	nup35	100	67.485	ENSCSAG00000012620	NUP35	100	67.485	Chlorocebus_sabaeus
ENSIPUG00000002798	nup35	100	68.923	ENSCPBG00000001303	NUP35	100	68.923	Chrysemys_picta_bellii
ENSIPUG00000002798	nup35	98	41.745	ENSCING00000009659	-	98	41.745	Ciona_intestinalis
ENSIPUG00000002798	nup35	99	41.471	ENSCSAVG00000007467	-	100	41.471	Ciona_savignyi
ENSIPUG00000002798	nup35	100	67.485	ENSCANG00000030785	NUP35	100	69.579	Colobus_angolensis_palliatus
ENSIPUG00000002798	nup35	98	68.608	ENSCGRG00001018638	-	100	66.462	Cricetulus_griseus_chok1gshd
ENSIPUG00000002798	nup35	98	68.608	ENSCGRG00000011313	-	100	66.462	Cricetulus_griseus_crigri
ENSIPUG00000002798	nup35	100	63.578	ENSCSEG00000000938	nup35	100	63.578	Cynoglossus_semilaevis
ENSIPUG00000002798	nup35	98	66.667	ENSCVAG00000001792	nup35	98	66.667	Cyprinodon_variegatus
ENSIPUG00000002798	nup35	100	74.921	ENSDARG00000012222	nup35	100	76.496	Danio_rerio
ENSIPUG00000002798	nup35	100	67.278	ENSDNOG00000009513	-	88	67.278	Dasypus_novemcinctus
ENSIPUG00000002798	nup35	100	66.667	ENSDNOG00000038754	-	100	66.667	Dasypus_novemcinctus
ENSIPUG00000002798	nup35	100	68.438	ENSDORG00000010458	-	98	68.438	Dipodomys_ordii
ENSIPUG00000002798	nup35	98	70.418	ENSETEG00000005896	NUP35	99	70.418	Echinops_telfairi
ENSIPUG00000002798	nup35	100	55.183	ENSEBUG00000013034	nup35	100	55.183	Eptatretus_burgeri
ENSIPUG00000002798	nup35	100	67.890	ENSEASG00005022100	NUP35	100	67.890	Equus_asinus_asinus
ENSIPUG00000002798	nup35	100	68.438	ENSECAG00000003968	NUP35	100	70.000	Equus_caballus
ENSIPUG00000002798	nup35	100	60.856	ENSEEUG00000008469	NUP35	100	60.856	Erinaceus_europaeus
ENSIPUG00000002798	nup35	100	73.567	ENSELUG00000013693	nup35	100	74.098	Esox_lucius
ENSIPUG00000002798	nup35	98	67.508	ENSFCAG00000025636	NUP35	100	67.949	Felis_catus
ENSIPUG00000002798	nup35	100	65.741	ENSFALG00000013175	NUP35	100	66.049	Ficedula_albicollis
ENSIPUG00000002798	nup35	98	70.968	ENSFDAG00000017998	NUP35	95	70.968	Fukomys_damarensis
ENSIPUG00000002798	nup35	100	64.856	ENSFHEG00000010229	nup35	100	65.495	Fundulus_heteroclitus
ENSIPUG00000002798	nup35	80	60.081	ENSGMOG00000003337	nup35	100	60.081	Gadus_morhua
ENSIPUG00000002798	nup35	98	68.810	ENSGALG00000002689	NUP35	96	68.810	Gallus_gallus
ENSIPUG00000002798	nup35	100	64.127	ENSGAFG00000022048	nup35	100	65.397	Gambusia_affinis
ENSIPUG00000002798	nup35	100	62.620	ENSGACG00000008203	nup35	100	62.939	Gasterosteus_aculeatus
ENSIPUG00000002798	nup35	97	71.383	ENSGAGG00000001967	NUP35	100	71.383	Gopherus_agassizii
ENSIPUG00000002798	nup35	100	67.791	ENSGGOG00000009919	NUP35	98	69.951	Gorilla_gorilla
ENSIPUG00000002798	nup35	98	54.341	ENSHGLG00000000414	-	96	54.341	Heterocephalus_glaber_female
ENSIPUG00000002798	nup35	98	69.453	ENSHGLG00000013230	NUP35	95	69.453	Heterocephalus_glaber_female
ENSIPUG00000002798	nup35	92	60.884	ENSHGLG00000008616	-	89	61.512	Heterocephalus_glaber_female
ENSIPUG00000002798	nup35	98	54.341	ENSHGLG00100010869	-	96	54.341	Heterocephalus_glaber_male
ENSIPUG00000002798	nup35	98	69.453	ENSHGLG00100012840	NUP35	95	69.453	Heterocephalus_glaber_male
ENSIPUG00000002798	nup35	92	60.884	ENSHGLG00100000091	-	90	60.884	Heterocephalus_glaber_male
ENSIPUG00000002798	nup35	100	62.179	ENSHCOG00000003882	nup35	100	62.179	Hippocampus_comes
ENSIPUG00000002798	nup35	98	69.206	ENSSTOG00000000711	NUP35	100	67.077	Ictidomys_tridecemlineatus
ENSIPUG00000002798	nup35	98	69.355	ENSJJAG00000016432	-	96	69.355	Jaculus_jaculus
ENSIPUG00000002798	nup35	100	59.434	ENSJJAG00000007003	-	98	59.375	Jaculus_jaculus
ENSIPUG00000002798	nup35	84	66.543	ENSJJAG00000006387	-	90	66.543	Jaculus_jaculus
ENSIPUG00000002798	nup35	98	61.661	ENSJJAG00000017434	-	95	62.013	Jaculus_jaculus
ENSIPUG00000002798	nup35	100	61.709	ENSKMAG00000011162	nup35	100	62.658	Kryptolebias_marmoratus
ENSIPUG00000002798	nup35	100	52.090	ENSLBEG00000012416	nup35	100	52.090	Labrus_bergylta
ENSIPUG00000002798	nup35	97	69.453	ENSLACG00000008247	NUP35	100	69.453	Latimeria_chalumnae
ENSIPUG00000002798	nup35	100	69.688	ENSLOCG00000006726	nup35	100	70.312	Lepisosteus_oculatus
ENSIPUG00000002798	nup35	100	66.667	ENSLAFG00000008155	NUP35	100	65.861	Loxodonta_africana
ENSIPUG00000002798	nup35	100	67.178	ENSMFAG00000000834	NUP35	100	69.256	Macaca_fascicularis
ENSIPUG00000002798	nup35	98	69.677	ENSMMUG00000004140	NUP35	99	69.108	Macaca_mulatta
ENSIPUG00000002798	nup35	100	67.485	ENSMNEG00000029014	NUP35	100	67.485	Macaca_nemestrina
ENSIPUG00000002798	nup35	100	67.485	ENSMLEG00000035422	NUP35	100	69.579	Mandrillus_leucophaeus
ENSIPUG00000002798	nup35	100	64.217	ENSMAMG00000013232	nup35	100	64.537	Mastacembelus_armatus
ENSIPUG00000002798	nup35	98	65.246	ENSMZEG00005020619	nup35	94	65.246	Maylandia_zebra
ENSIPUG00000002798	nup35	98	67.308	ENSMGAG00000004412	NUP35	95	67.949	Meleagris_gallopavo
ENSIPUG00000002798	nup35	100	66.564	ENSMAUG00000013776	-	100	66.564	Mesocricetus_auratus
ENSIPUG00000002798	nup35	98	68.254	ENSMICG00000006790	NUP35	100	68.710	Microcebus_murinus
ENSIPUG00000002798	nup35	100	66.564	ENSMOCG00000014754	-	100	66.564	Microtus_ochrogaster
ENSIPUG00000002798	nup35	100	62.620	ENSMMOG00000005026	nup35	100	62.620	Mola_mola
ENSIPUG00000002798	nup35	98	69.677	ENSMODG00000010578	NUP35	95	69.677	Monodelphis_domestica
ENSIPUG00000002798	nup35	100	65.176	ENSMALG00000020187	nup35	100	65.176	Monopterus_albus
ENSIPUG00000002798	nup35	100	65.951	MGP_CAROLIEiJ_G0023709	-	100	65.951	Mus_caroli
ENSIPUG00000002798	nup35	100	65.951	ENSMUSG00000026999	Nup35	100	65.951	Mus_musculus
ENSIPUG00000002798	nup35	100	65.951	MGP_PahariEiJ_G0025160	-	100	65.951	Mus_pahari
ENSIPUG00000002798	nup35	83	59.197	MGP_SPRETEiJ_G0033063	-	99	59.197	Mus_spretus
ENSIPUG00000002798	nup35	98	68.770	ENSMPUG00000002063	NUP35	100	67.173	Mustela_putorius_furo
ENSIPUG00000002798	nup35	100	68.196	ENSMLUG00000013154	NUP35	100	68.196	Myotis_lucifugus
ENSIPUG00000002798	nup35	100	66.462	ENSNGAG00000012107	-	100	66.462	Nannospalax_galili
ENSIPUG00000002798	nup35	98	64.452	ENSNBRG00000020466	nup35	96	65.449	Neolamprologus_brichardi
ENSIPUG00000002798	nup35	100	67.791	ENSNLEG00000035026	NUP35	100	69.903	Nomascus_leucogenys
ENSIPUG00000002798	nup35	66	50.472	ENSMEUG00000003001	-	65	50.472	Notamacropus_eugenii
ENSIPUG00000002798	nup35	80	69.261	ENSOPRG00000016609	NUP35	78	69.261	Ochotona_princeps
ENSIPUG00000002798	nup35	98	68.139	ENSODEG00000011202	-	95	68.139	Octodon_degus
ENSIPUG00000002798	nup35	99	46.933	ENSODEG00000000280	-	99	46.933	Octodon_degus
ENSIPUG00000002798	nup35	100	63.924	ENSONIG00000016251	nup35	100	63.608	Oreochromis_niloticus
ENSIPUG00000002798	nup35	74	73.504	ENSOANG00000006793	-	96	72.996	Ornithorhynchus_anatinus
ENSIPUG00000002798	nup35	100	67.178	ENSOCUG00000014407	NUP35	100	67.178	Oryctolagus_cuniculus
ENSIPUG00000002798	nup35	100	63.376	ENSORLG00000013588	nup35	100	64.474	Oryzias_latipes
ENSIPUG00000002798	nup35	100	63.376	ENSORLG00020008201	nup35	100	63.376	Oryzias_latipes_hni
ENSIPUG00000002798	nup35	100	63.057	ENSORLG00015011096	nup35	100	64.145	Oryzias_latipes_hsok
ENSIPUG00000002798	nup35	100	64.013	ENSOMEG00000007628	nup35	100	64.013	Oryzias_melastigma
ENSIPUG00000002798	nup35	98	66.879	ENSOGAG00000011920	NUP35	100	66.055	Otolemur_garnettii
ENSIPUG00000002798	nup35	100	67.890	ENSOARG00000016728	NUP35	100	67.890	Ovis_aries
ENSIPUG00000002798	nup35	100	67.791	ENSPPAG00000036316	NUP35	100	69.903	Pan_paniscus
ENSIPUG00000002798	nup35	98	67.823	ENSPPRG00000024726	NUP35	100	68.269	Panthera_pardus
ENSIPUG00000002798	nup35	98	67.823	ENSPTIG00000017299	NUP35	95	68.371	Panthera_tigris_altaica
ENSIPUG00000002798	nup35	100	67.791	ENSPTRG00000012711	NUP35	100	69.903	Pan_troglodytes
ENSIPUG00000002798	nup35	100	67.485	ENSPANG00000013686	NUP35	100	67.485	Papio_anubis
ENSIPUG00000002798	nup35	98	74.593	ENSPKIG00000022051	nup35	100	73.651	Paramormyrops_kingsleyae
ENSIPUG00000002798	nup35	97	70.645	ENSPSIG00000002146	NUP35	100	70.645	Pelodiscus_sinensis
ENSIPUG00000002798	nup35	98	58.974	ENSPMGG00000022915	nup35	97	59.236	Periophthalmus_magnuspinnatus
ENSIPUG00000002798	nup35	100	66.871	ENSPEMG00000014718	-	100	66.871	Peromyscus_maniculatus_bairdii
ENSIPUG00000002798	nup35	98	58.438	ENSPMAG00000006604	nup35	97	58.025	Petromyzon_marinus
ENSIPUG00000002798	nup35	100	67.584	ENSPCIG00000015482	NUP35	100	67.584	Phascolarctos_cinereus
ENSIPUG00000002798	nup35	100	63.175	ENSPFOG00000010020	nup35	100	64.444	Poecilia_formosa
ENSIPUG00000002798	nup35	100	62.857	ENSPLAG00000005867	nup35	100	64.127	Poecilia_latipinna
ENSIPUG00000002798	nup35	98	66.113	ENSPMEG00000010552	nup35	100	64.444	Poecilia_mexicana
ENSIPUG00000002798	nup35	100	63.898	ENSPREG00000021005	nup35	100	64.537	Poecilia_reticulata
ENSIPUG00000002798	nup35	100	67.791	ENSPPYG00000012998	-	80	67.791	Pongo_abelii
ENSIPUG00000002798	nup35	82	70.588	ENSPCAG00000000605	NUP35	80	70.588	Procavia_capensis
ENSIPUG00000002798	nup35	98	68.889	ENSPCOG00000024097	NUP35	100	67.278	Propithecus_coquereli
ENSIPUG00000002798	nup35	100	67.890	ENSPVAG00000015908	NUP35	100	67.890	Pteropus_vampyrus
ENSIPUG00000002798	nup35	98	65.449	ENSPNYG00000012486	nup35	94	65.449	Pundamilia_nyererei
ENSIPUG00000002798	nup35	100	78.302	ENSPNAG00000005181	nup35	100	78.302	Pygocentrus_nattereri
ENSIPUG00000002798	nup35	100	66.258	ENSRNOG00000009290	Nup35	100	66.258	Rattus_norvegicus
ENSIPUG00000002798	nup35	100	67.485	ENSRBIG00000039427	NUP35	100	69.579	Rhinopithecus_bieti
ENSIPUG00000002798	nup35	100	67.178	ENSRROG00000026525	NUP35	96	71.875	Rhinopithecus_roxellana
ENSIPUG00000002798	nup35	100	67.485	ENSSBOG00000018676	NUP35	99	70.558	Saimiri_boliviensis_boliviensis
ENSIPUG00000002798	nup35	98	69.775	ENSSHAG00000009746	NUP35	95	69.775	Sarcophilus_harrisii
ENSIPUG00000002798	nup35	98	75.490	ENSSFOG00015002390	nup35	98	74.839	Scleropages_formosus
ENSIPUG00000002798	nup35	100	64.217	ENSSMAG00000015651	nup35	100	64.217	Scophthalmus_maximus
ENSIPUG00000002798	nup35	98	67.110	ENSSDUG00000013118	nup35	100	65.176	Seriola_dumerili
ENSIPUG00000002798	nup35	100	65.584	ENSSLDG00000018249	nup35	99	65.584	Seriola_lalandi_dorsalis
ENSIPUG00000002798	nup35	98	53.226	ENSSARG00000001535	-	99	53.226	Sorex_araneus
ENSIPUG00000002798	nup35	100	67.485	ENSSPUG00000018651	NUP35	100	67.485	Sphenodon_punctatus
ENSIPUG00000002798	nup35	99	64.821	ENSSPAG00000018264	nup35	100	63.578	Stegastes_partitus
ENSIPUG00000002798	nup35	100	66.972	ENSSSCG00000028949	NUP35	100	66.972	Sus_scrofa
ENSIPUG00000002798	nup35	100	66.163	ENSTGUG00000011278	NUP35	100	66.163	Taeniopygia_guttata
ENSIPUG00000002798	nup35	93	58.020	ENSTRUG00000014111	nup35	100	58.020	Takifugu_rubripes
ENSIPUG00000002798	nup35	98	54.333	ENSTNIG00000011568	nup35	94	54.333	Tetraodon_nigroviridis
ENSIPUG00000002798	nup35	100	63.914	ENSTBEG00000003328	NUP35	100	63.914	Tupaia_belangeri
ENSIPUG00000002798	nup35	100	57.231	ENSTTRG00000002512	NUP35	100	57.231	Tursiops_truncatus
ENSIPUG00000002798	nup35	60	71.875	ENSUAMG00000018696	-	93	71.875	Ursus_americanus
ENSIPUG00000002798	nup35	90	68.259	ENSUMAG00000017104	NUP35	99	66.557	Ursus_maritimus
ENSIPUG00000002798	nup35	100	67.584	ENSVPAG00000011898	NUP35	100	67.584	Vicugna_pacos
ENSIPUG00000002798	nup35	97	68.590	ENSVVUG00000016832	NUP35	100	68.590	Vulpes_vulpes
ENSIPUG00000002798	nup35	99	62.579	ENSXETG00000001335	nup35	100	59.459	Xenopus_tropicalis
ENSIPUG00000002798	nup35	100	63.810	ENSXMAG00000000409	nup35	100	65.079	Xiphophorus_maculatus