EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000003006 (Gene tree)
Gene ID: -
Gene Symbol: sall3b
Alias: im:7138196|sall3l|sallb|si:dkey-195c14.1|wu:fb01e09
Full Name: sal-like protein 3
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 7957 bases
Position: chr24:13197720-13205676
Accession: 108256805
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000004291	zf-C2H2	PF00096.26	2.4e-26	1	5
ENSIPUP00000004291	zf-C2H2	PF00096.26	2.4e-26	2	5
ENSIPUP00000004291	zf-C2H2	PF00096.26	2.4e-26	3	5
ENSIPUP00000004291	zf-C2H2	PF00096.26	2.4e-26	4	5
ENSIPUP00000004291	zf-C2H2	PF00096.26	2.4e-26	5	5
ENSIPUP00000004291	zf-met	PF12874.7	1.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000004491	-	3705	XM_017454031	ENSIPUP00000004291	1234 (aa)	XP_017309520	-

Gene Model

Click here to download ENSIPUG00000003006's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000003006's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000003006	sall3b	58	57.143	ENSIPUG00000016075	-	97	51.020
ENSIPUG00000003006	sall3b	86	60.345	ENSIPUG00000022928	sall1b	74	60.345
ENSIPUG00000003006	sall3b	56	53.488	ENSIPUG00000022751	-	96	50.943
ENSIPUG00000003006	sall3b	53	65.385	ENSIPUG00000019170	sall4	50	78.182
ENSIPUG00000003006	sall3b	56	48.889	ENSIPUG00000023635	-	87	50.980
ENSIPUG00000003006	sall3b	55	49.057	ENSIPUG00000013315	-	96	49.057
ENSIPUG00000003006	sall3b	100	48.458	ENSIPUG00000003378	sall3	83	63.462
ENSIPUG00000003006	sall3b	100	63.462	ENSIPUG00000016265	SALL1	96	63.462
ENSIPUG00000003006	sall3b	56	50.943	ENSIPUG00000021441	-	78	50.943
ENSIPUG00000003006	sall3b	56	54.902	ENSIPUG00000023688	-	91	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000003006	sall3b	94	63.462	ENSG00000256463	SALL3	92	63.462	Homo_sapiens
ENSIPUG00000003006	sall3b	70	52.304	ENSAPOG00000020922	sall3a	79	63.462	Acanthochromis_polyacanthus
ENSIPUG00000003006	sall3b	100	50.973	ENSAPOG00000004264	sall3b	100	51.628	Acanthochromis_polyacanthus
ENSIPUG00000003006	sall3b	70	65.000	ENSAMEG00000010206	SALL3	95	65.297	Ailuropoda_melanoleuca
ENSIPUG00000003006	sall3b	77	55.664	ENSACIG00000019407	sall3b	100	55.750	Amphilophus_citrinellus
ENSIPUG00000003006	sall3b	75	61.111	ENSACIG00000014041	sall3a	96	57.778	Amphilophus_citrinellus
ENSIPUG00000003006	sall3b	75	61.111	ENSAOCG00000010863	sall3a	94	57.778	Amphiprion_ocellaris
ENSIPUG00000003006	sall3b	69	54.104	ENSAOCG00000012779	sall3b	100	51.510	Amphiprion_ocellaris
ENSIPUG00000003006	sall3b	70	52.468	ENSAPEG00000019278	sall3a	100	47.897	Amphiprion_percula
ENSIPUG00000003006	sall3b	100	48.159	ENSATEG00000024524	sall3a	98	61.765	Anabas_testudineus
ENSIPUG00000003006	sall3b	87	68.696	ENSATEG00000004914	sall3b	100	52.204	Anabas_testudineus
ENSIPUG00000003006	sall3b	98	49.922	ENSAPLG00000013214	SALL3	98	50.040	Anas_platyrhynchos
ENSIPUG00000003006	sall3b	94	65.306	ENSACAG00000000478	SALL3	100	49.271	Anolis_carolinensis
ENSIPUG00000003006	sall3b	94	63.462	ENSANAG00000032412	SALL3	94	63.462	Aotus_nancymaae
ENSIPUG00000003006	sall3b	74	61.538	ENSACLG00000022451	sall3a	98	59.091	Astatotilapia_calliptera
ENSIPUG00000003006	sall3b	100	51.954	ENSACLG00000001619	sall3b	100	52.628	Astatotilapia_calliptera
ENSIPUG00000003006	sall3b	77	67.275	ENSAMXG00000035442	sall3b	100	67.049	Astyanax_mexicanus
ENSIPUG00000003006	sall3b	100	49.185	ENSAMXG00000011185	sall3a	97	60.000	Astyanax_mexicanus
ENSIPUG00000003006	sall3b	76	54.651	ENSBTAG00000050200	SALL3	98	63.462	Bos_taurus
ENSIPUG00000003006	sall3b	80	63.462	ENSCJAG00000007332	SALL3	92	63.462	Callithrix_jacchus
ENSIPUG00000003006	sall3b	87	50.699	ENSCAFG00000000013	SALL3	97	51.239	Canis_familiaris
ENSIPUG00000003006	sall3b	87	63.462	ENSCAFG00020015092	SALL3	95	63.462	Canis_lupus_dingo
ENSIPUG00000003006	sall3b	94	65.306	ENSCHIG00000000145	SALL3	98	63.462	Capra_hircus
ENSIPUG00000003006	sall3b	74	57.143	ENSTSYG00000028846	SALL3	94	52.481	Carlito_syrichta
ENSIPUG00000003006	sall3b	82	63.462	ENSCAPG00000006496	SALL3	91	62.500	Cavia_aperea
ENSIPUG00000003006	sall3b	98	49.762	ENSCPOG00000008546	SALL3	99	49.802	Cavia_porcellus
ENSIPUG00000003006	sall3b	100	48.422	ENSCCAG00000034863	SALL3	100	48.918	Cebus_capucinus
ENSIPUG00000003006	sall3b	80	63.462	ENSCATG00000029727	SALL3	94	63.462	Cercocebus_atys
ENSIPUG00000003006	sall3b	73	52.880	ENSCLAG00000007727	SALL3	99	49.763	Chinchilla_lanigera
ENSIPUG00000003006	sall3b	80	63.462	ENSCSAG00000018244	SALL3	94	63.462	Chlorocebus_sabaeus
ENSIPUG00000003006	sall3b	94	65.306	ENSCPBG00000003657	SALL3	98	63.462	Chrysemys_picta_bellii
ENSIPUG00000003006	sall3b	74	65.385	ENSCANG00000030302	SALL3	99	62.791	Colobus_angolensis_palliatus
ENSIPUG00000003006	sall3b	100	63.462	ENSCGRG00001018203	Sall3	99	63.462	Cricetulus_griseus_chok1gshd
ENSIPUG00000003006	sall3b	97	48.254	ENSCGRG00000017127	Sall3	99	49.162	Cricetulus_griseus_crigri
ENSIPUG00000003006	sall3b	58	65.306	ENSCSEG00000009058	sall3a	100	47.810	Cynoglossus_semilaevis
ENSIPUG00000003006	sall3b	75	52.592	ENSCSEG00000009569	sall3b	97	52.808	Cynoglossus_semilaevis
ENSIPUG00000003006	sall3b	79	92.157	ENSCVAG00000017005	sall3b	81	92.157	Cyprinodon_variegatus
ENSIPUG00000003006	sall3b	76	64.815	ENSCVAG00000009684	sall3a	93	63.636	Cyprinodon_variegatus
ENSIPUG00000003006	sall3b	86	63.462	ENSDARG00000079613	sall3a	83	63.462	Danio_rerio
ENSIPUG00000003006	sall3b	100	62.774	ENSDARG00000057586	sall3b	100	62.618	Danio_rerio
ENSIPUG00000003006	sall3b	70	68.447	ENSDNOG00000025483	SALL3	97	63.462	Dasypus_novemcinctus
ENSIPUG00000003006	sall3b	70	66.509	ENSDORG00000002702	Sall3	89	63.462	Dipodomys_ordii
ENSIPUG00000003006	sall3b	72	64.159	ENSETEG00000001481	SALL3	94	64.159	Echinops_telfairi
ENSIPUG00000003006	sall3b	68	40.810	ENSEBUG00000009706	sall3b	77	63.462	Eptatretus_burgeri
ENSIPUG00000003006	sall3b	100	48.939	ENSEASG00005002071	SALL3	100	49.311	Equus_asinus_asinus
ENSIPUG00000003006	sall3b	100	48.936	ENSECAG00000015414	SALL3	100	49.616	Equus_caballus
ENSIPUG00000003006	sall3b	100	49.623	ENSELUG00000009541	sall3b	100	49.509	Esox_lucius
ENSIPUG00000003006	sall3b	93	65.278	ENSELUG00000020351	sall3a	100	48.627	Esox_lucius
ENSIPUG00000003006	sall3b	100	63.462	ENSFCAG00000028839	SALL3	98	63.462	Felis_catus
ENSIPUG00000003006	sall3b	100	49.045	ENSFALG00000013343	SALL3	100	48.930	Ficedula_albicollis
ENSIPUG00000003006	sall3b	98	49.175	ENSFDAG00000014697	SALL3	97	49.601	Fukomys_damarensis
ENSIPUG00000003006	sall3b	98	48.860	ENSGMOG00000006649	sall3a	99	48.273	Gadus_morhua
ENSIPUG00000003006	sall3b	100	48.299	ENSGALG00000041404	SALL3	98	63.636	Gallus_gallus
ENSIPUG00000003006	sall3b	83	65.258	ENSGAFG00000001581	sall3a	75	65.258	Gambusia_affinis
ENSIPUG00000003006	sall3b	100	48.265	ENSGAFG00000014435	-	73	76.871	Gambusia_affinis
ENSIPUG00000003006	sall3b	83	68.493	ENSGACG00000002533	sall3b	100	50.973	Gasterosteus_aculeatus
ENSIPUG00000003006	sall3b	85	63.462	ENSGACG00000005503	sall3a	78	63.462	Gasterosteus_aculeatus
ENSIPUG00000003006	sall3b	94	65.306	ENSGAGG00000000925	SALL3	100	50.000	Gopherus_agassizii
ENSIPUG00000003006	sall3b	94	63.462	ENSGGOG00000008127	SALL3	92	63.462	Gorilla_gorilla
ENSIPUG00000003006	sall3b	70	52.386	ENSHBUG00000004486	sall3a	100	48.321	Haplochromis_burtoni
ENSIPUG00000003006	sall3b	77	54.280	ENSHBUG00000018127	sall3b	100	54.645	Haplochromis_burtoni
ENSIPUG00000003006	sall3b	100	49.005	ENSHGLG00000000824	SALL3	100	48.679	Heterocephalus_glaber_female
ENSIPUG00000003006	sall3b	100	47.963	ENSHGLG00100008694	SALL3	100	47.727	Heterocephalus_glaber_male
ENSIPUG00000003006	sall3b	95	63.462	ENSHCOG00000004745	sall3b	91	65.728	Hippocampus_comes
ENSIPUG00000003006	sall3b	100	48.902	ENSHCOG00000010423	sall3a	98	55.556	Hippocampus_comes
ENSIPUG00000003006	sall3b	69	53.364	ENSSTOG00000004145	SALL3	100	49.961	Ictidomys_tridecemlineatus
ENSIPUG00000003006	sall3b	70	51.818	ENSKMAG00000012418	sall3b	100	49.441	Kryptolebias_marmoratus
ENSIPUG00000003006	sall3b	88	63.462	ENSKMAG00000003846	sall3a	84	63.462	Kryptolebias_marmoratus
ENSIPUG00000003006	sall3b	77	54.171	ENSLBEG00000015706	sall3b	100	54.814	Labrus_bergylta
ENSIPUG00000003006	sall3b	71	52.929	ENSLBEG00000005152	sall3a	100	48.780	Labrus_bergylta
ENSIPUG00000003006	sall3b	100	52.999	ENSLOCG00000007831	sall3a	100	53.517	Lepisosteus_oculatus
ENSIPUG00000003006	sall3b	98	63.462	ENSLAFG00000013521	SALL3	97	63.462	Loxodonta_africana
ENSIPUG00000003006	sall3b	71	63.462	ENSMFAG00000031402	SALL3	93	63.462	Macaca_fascicularis
ENSIPUG00000003006	sall3b	65	63.462	ENSMMUG00000000286	SALL3	94	63.462	Macaca_mulatta
ENSIPUG00000003006	sall3b	65	63.462	ENSMNEG00000029916	SALL3	91	63.462	Macaca_nemestrina
ENSIPUG00000003006	sall3b	86	63.462	ENSMAMG00000001276	sall3a	76	63.462	Mastacembelus_armatus
ENSIPUG00000003006	sall3b	78	54.715	ENSMAMG00000006101	sall3b	100	54.555	Mastacembelus_armatus
ENSIPUG00000003006	sall3b	74	61.538	ENSMZEG00005007586	sall3a	98	59.091	Maylandia_zebra
ENSIPUG00000003006	sall3b	100	52.031	ENSMZEG00005026224	sall3b	100	52.705	Maylandia_zebra
ENSIPUG00000003006	sall3b	100	49.015	ENSMGAG00000002297	SALL3	100	48.786	Meleagris_gallopavo
ENSIPUG00000003006	sall3b	100	63.462	ENSMAUG00000011828	Sall3	99	63.462	Mesocricetus_auratus
ENSIPUG00000003006	sall3b	65	65.306	ENSMICG00000017395	SALL3	100	53.634	Microcebus_murinus
ENSIPUG00000003006	sall3b	100	49.047	ENSMOCG00000013205	Sall3	100	49.541	Microtus_ochrogaster
ENSIPUG00000003006	sall3b	74	61.538	ENSMMOG00000003253	sall3a	97	58.140	Mola_mola
ENSIPUG00000003006	sall3b	76	55.006	ENSMMOG00000014246	sall3b	99	54.636	Mola_mola
ENSIPUG00000003006	sall3b	100	49.735	ENSMODG00000012231	SALL3	100	49.886	Monodelphis_domestica
ENSIPUG00000003006	sall3b	67	52.174	ENSMALG00000003343	sall3a	99	48.545	Monopterus_albus
ENSIPUG00000003006	sall3b	100	50.565	ENSMALG00000015200	sall3b	100	50.340	Monopterus_albus
ENSIPUG00000003006	sall3b	100	49.081	MGP_CAROLIEiJ_G0022442	Sall3	100	49.115	Mus_caroli
ENSIPUG00000003006	sall3b	100	48.928	ENSMUSG00000024565	Sall3	100	49.038	Mus_musculus
ENSIPUG00000003006	sall3b	100	48.661	MGP_PahariEiJ_G0019170	Sall3	100	48.769	Mus_pahari
ENSIPUG00000003006	sall3b	100	49.044	MGP_SPRETEiJ_G0023357	Sall3	100	49.000	Mus_spretus
ENSIPUG00000003006	sall3b	62	52.000	ENSMPUG00000016646	SALL3	96	51.828	Mustela_putorius_furo
ENSIPUG00000003006	sall3b	100	63.462	ENSNGAG00000023772	Sall3	99	63.462	Nannospalax_galili
ENSIPUG00000003006	sall3b	77	54.821	ENSNBRG00000016034	sall3b	100	55.725	Neolamprologus_brichardi
ENSIPUG00000003006	sall3b	70	51.688	ENSNBRG00000008974	sall3a	84	63.462	Neolamprologus_brichardi
ENSIPUG00000003006	sall3b	76	53.933	ENSNLEG00000008217	SALL3	94	63.462	Nomascus_leucogenys
ENSIPUG00000003006	sall3b	69	63.462	ENSODEG00000002692	SALL3	98	63.462	Octodon_degus
ENSIPUG00000003006	sall3b	69	54.605	ENSONIG00000013791	sall3b	100	52.705	Oreochromis_niloticus
ENSIPUG00000003006	sall3b	74	65.198	ENSOCUG00000029398	SALL3	89	65.198	Oryctolagus_cuniculus
ENSIPUG00000003006	sall3b	58	77.778	ENSOCUG00000004364	-	85	71.795	Oryctolagus_cuniculus
ENSIPUG00000003006	sall3b	84	65.566	ENSORLG00000020718	sall3a	100	47.426	Oryzias_latipes
ENSIPUG00000003006	sall3b	100	45.746	ENSORLG00020015105	sall3b	64	49.202	Oryzias_latipes_hni
ENSIPUG00000003006	sall3b	98	46.712	ENSORLG00020001794	sall3a	79	65.566	Oryzias_latipes_hni
ENSIPUG00000003006	sall3b	98	47.014	ENSORLG00015018152	sall3a	96	60.000	Oryzias_latipes_hsok
ENSIPUG00000003006	sall3b	87	63.462	ENSORLG00015005877	sall3b	88	72.449	Oryzias_latipes_hsok
ENSIPUG00000003006	sall3b	100	47.469	ENSOMEG00000011390	sall3a	100	47.357	Oryzias_melastigma
ENSIPUG00000003006	sall3b	100	63.462	ENSOGAG00000031681	SALL3	100	63.462	Otolemur_garnettii
ENSIPUG00000003006	sall3b	68	65.306	ENSOARG00000004353	SALL3	89	64.516	Ovis_aries
ENSIPUG00000003006	sall3b	74	68.750	ENSPPAG00000029586	-	96	66.667	Pan_paniscus
ENSIPUG00000003006	sall3b	76	55.056	ENSPTRG00000010126	SALL3	92	63.462	Pan_troglodytes
ENSIPUG00000003006	sall3b	80	63.462	ENSPANG00000006485	SALL3	96	62.791	Papio_anubis
ENSIPUG00000003006	sall3b	90	63.265	ENSPKIG00000013427	sall3a	97	62.745	Paramormyrops_kingsleyae
ENSIPUG00000003006	sall3b	85	63.462	ENSPKIG00000018271	SALL3	88	63.462	Paramormyrops_kingsleyae
ENSIPUG00000003006	sall3b	98	50.158	ENSPSIG00000008556	SALL3	96	53.421	Pelodiscus_sinensis
ENSIPUG00000003006	sall3b	98	48.565	ENSPMGG00000017042	sall3a	96	47.902	Periophthalmus_magnuspinnatus
ENSIPUG00000003006	sall3b	100	63.462	ENSPEMG00000022799	Sall3	98	63.462	Peromyscus_maniculatus_bairdii
ENSIPUG00000003006	sall3b	59	71.579	ENSPMAG00000004595	-	57	78.750	Petromyzon_marinus
ENSIPUG00000003006	sall3b	100	64.050	ENSPCIG00000002472	SALL3	98	64.050	Phascolarctos_cinereus
ENSIPUG00000003006	sall3b	69	51.241	ENSPFOG00000019127	sall3a	100	47.295	Poecilia_formosa
ENSIPUG00000003006	sall3b	86	49.314	ENSPFOG00000013292	sall3b	100	48.414	Poecilia_formosa
ENSIPUG00000003006	sall3b	91	63.462	ENSPLAG00000018123	sall3a	85	63.462	Poecilia_latipinna
ENSIPUG00000003006	sall3b	86	49.359	ENSPLAG00000013919	sall3b	100	48.057	Poecilia_latipinna
ENSIPUG00000003006	sall3b	77	49.664	ENSPMEG00000023703	sall3b	69	85.106	Poecilia_mexicana
ENSIPUG00000003006	sall3b	69	51.185	ENSPMEG00000014946	sall3a	70	51.101	Poecilia_mexicana
ENSIPUG00000003006	sall3b	90	46.819	ENSPREG00000014420	sall3a	95	45.959	Poecilia_reticulata
ENSIPUG00000003006	sall3b	100	47.443	ENSPREG00000015079	sall3b	100	47.597	Poecilia_reticulata
ENSIPUG00000003006	sall3b	98	48.734	ENSPPYG00000009253	SALL3	98	48.960	Pongo_abelii
ENSIPUG00000003006	sall3b	77	63.462	ENSPCOG00000012553	SALL3	97	63.462	Propithecus_coquereli
ENSIPUG00000003006	sall3b	85	65.217	ENSPVAG00000014645	SALL3	91	65.217	Pteropus_vampyrus
ENSIPUG00000003006	sall3b	77	54.162	ENSPNYG00000005353	sall3b	100	55.240	Pundamilia_nyererei
ENSIPUG00000003006	sall3b	70	51.204	ENSPNYG00000012783	sall3a	99	48.237	Pundamilia_nyererei
ENSIPUG00000003006	sall3b	100	72.069	ENSPNAG00000017141	sall3b	100	71.474	Pygocentrus_nattereri
ENSIPUG00000003006	sall3b	87	63.462	ENSRNOG00000026116	Sall3	97	63.462	Rattus_norvegicus
ENSIPUG00000003006	sall3b	76	63.462	ENSRBIG00000036190	SALL3	94	63.462	Rhinopithecus_bieti
ENSIPUG00000003006	sall3b	77	63.636	ENSRROG00000034130	SALL3	96	62.791	Rhinopithecus_roxellana
ENSIPUG00000003006	sall3b	73	66.667	ENSSBOG00000023380	SALL3	98	63.636	Saimiri_boliviensis_boliviensis
ENSIPUG00000003006	sall3b	100	49.388	ENSSHAG00000015872	SALL3	100	49.655	Sarcophilus_harrisii
ENSIPUG00000003006	sall3b	97	52.287	ENSSFOG00015012223	sall3a	99	64.103	Scleropages_formosus
ENSIPUG00000003006	sall3b	88	63.462	ENSSFOG00015009159	SALL3	85	63.462	Scleropages_formosus
ENSIPUG00000003006	sall3b	100	50.265	ENSSMAG00000019762	sall3b	100	50.573	Scophthalmus_maximus
ENSIPUG00000003006	sall3b	100	48.443	ENSSMAG00000007674	sall3a	100	48.102	Scophthalmus_maximus
ENSIPUG00000003006	sall3b	76	55.895	ENSSDUG00000010584	sall3b	99	55.786	Seriola_dumerili
ENSIPUG00000003006	sall3b	100	48.322	ENSSDUG00000011099	sall3a	100	47.744	Seriola_dumerili
ENSIPUG00000003006	sall3b	100	48.397	ENSSLDG00000012706	sall3a	100	47.820	Seriola_lalandi_dorsalis
ENSIPUG00000003006	sall3b	100	52.465	ENSSLDG00000016800	sall3b	100	52.425	Seriola_lalandi_dorsalis
ENSIPUG00000003006	sall3b	60	72.727	ENSSPAG00000003172	sall3b	77	72.727	Stegastes_partitus
ENSIPUG00000003006	sall3b	100	63.462	ENSSSCG00000004858	SALL3	98	63.462	Sus_scrofa
ENSIPUG00000003006	sall3b	98	48.174	ENSTGUG00000006541	SALL3	98	47.884	Taeniopygia_guttata
ENSIPUG00000003006	sall3b	82	62.745	ENSTBEG00000008964	SALL3	79	62.745	Tupaia_belangeri
ENSIPUG00000003006	sall3b	100	63.462	ENSUAMG00000016908	SALL3	98	63.462	Ursus_americanus
ENSIPUG00000003006	sall3b	69	53.245	ENSVVUG00000018838	SALL3	96	53.481	Vulpes_vulpes
ENSIPUG00000003006	sall3b	94	65.306	ENSXETG00000000845	sall3	100	48.489	Xenopus_tropicalis
ENSIPUG00000003006	sall3b	83	65.258	ENSXCOG00000016907	sall3a	74	65.258	Xiphophorus_couchianus
ENSIPUG00000003006	sall3b	59	67.778	ENSXCOG00000018799	sall3b	82	67.778	Xiphophorus_couchianus
ENSIPUG00000003006	sall3b	69	50.864	ENSXMAG00000023447	sall3a	71	51.268	Xiphophorus_maculatus
ENSIPUG00000003006	sall3b	90	57.143	ENSXMAG00000000798	sall3b	94	57.143	Xiphophorus_maculatus