EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000003011 (Gene tree)
Gene ID: 108259500
Gene Symbol: -
Alias: -
Full Name: histone-lysine N-methyltransferase PRDM9-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 7368 bases
Position: chr27:13788050-13795417
Accession: 108259500
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000004284	zf-C2H2	PF00096.26	2e-43	1	8
ENSIPUP00000004284	zf-C2H2	PF00096.26	2e-43	2	8
ENSIPUP00000004284	zf-C2H2	PF00096.26	2e-43	3	8
ENSIPUP00000004284	zf-C2H2	PF00096.26	2e-43	4	8
ENSIPUP00000004284	zf-C2H2	PF00096.26	2e-43	5	8
ENSIPUP00000004284	zf-C2H2	PF00096.26	2e-43	6	8
ENSIPUP00000004284	zf-C2H2	PF00096.26	2e-43	7	8
ENSIPUP00000004284	zf-C2H2	PF00096.26	2e-43	8	8
ENSIPUP00000004284	zf-met	PF12874.7	1.5e-12	1	4
ENSIPUP00000004284	zf-met	PF12874.7	1.5e-12	2	4
ENSIPUP00000004284	zf-met	PF12874.7	1.5e-12	3	4
ENSIPUP00000004284	zf-met	PF12874.7	1.5e-12	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000004485	-	1844	XM_017459046	ENSIPUP00000004284	585 (aa)	XP_017314535	A0A2D0QAX7

Gene Model

Click here to download ENSIPUG00000003011's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000003011's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000003011	-	74	54.648	ENSIPUG00000015177	-	73	54.648
ENSIPUG00000003011	-	67	59.211	ENSIPUG00000022741	-	95	59.211
ENSIPUG00000003011	-	61	63.900	ENSIPUG00000015468	-	90	63.900
ENSIPUG00000003011	-	99	62.673	ENSIPUG00000023513	-	93	60.699
ENSIPUG00000003011	-	69	56.250	ENSIPUG00000006916	-	97	56.250
ENSIPUG00000003011	-	69	55.455	ENSIPUG00000015233	-	71	55.455
ENSIPUG00000003011	-	55	62.434	ENSIPUG00000007934	-	97	62.434
ENSIPUG00000003011	-	86	41.714	ENSIPUG00000024162	prdm4	51	36.788
ENSIPUG00000003011	-	55	39.157	ENSIPUG00000019706	-	62	39.157
ENSIPUG00000003011	-	56	59.091	ENSIPUG00000015121	-	69	59.091
ENSIPUG00000003011	-	55	61.506	ENSIPUG00000021556	-	98	61.506
ENSIPUG00000003011	-	57	31.739	ENSIPUG00000002075	znf341	58	31.739
ENSIPUG00000003011	-	58	41.418	ENSIPUG00000012109	ZN12	57	41.418
ENSIPUG00000003011	-	53	41.317	ENSIPUG00000005379	e4f1	52	41.317
ENSIPUG00000003011	-	55	56.477	ENSIPUG00000004428	-	86	56.477
ENSIPUG00000003011	-	55	51.337	ENSIPUG00000016009	znf596	63	51.337
ENSIPUG00000003011	-	92	51.452	ENSIPUG00000023761	-	89	49.528
ENSIPUG00000003011	-	55	60.500	ENSIPUG00000011073	-	97	60.500
ENSIPUG00000003011	-	56	44.068	ENSIPUG00000018102	znf646	78	34.211
ENSIPUG00000003011	-	56	64.202	ENSIPUG00000015400	-	95	64.730
ENSIPUG00000003011	-	56	40.000	ENSIPUG00000021407	-	59	40.000
ENSIPUG00000003011	-	55	47.410	ENSIPUG00000022266	ZNF135	61	47.410
ENSIPUG00000003011	-	65	68.794	ENSIPUG00000015294	-	71	68.794
ENSIPUG00000003011	-	60	56.502	ENSIPUG00000022751	-	96	60.633
ENSIPUG00000003011	-	56	59.565	ENSIPUG00000009750	-	94	59.387
ENSIPUG00000003011	-	57	59.922	ENSIPUG00000023635	-	95	61.017
ENSIPUG00000003011	-	56	44.622	ENSIPUG00000019205	-	74	44.622
ENSIPUG00000003011	-	56	41.935	ENSIPUG00000007076	-	91	38.605
ENSIPUG00000003011	-	55	45.133	ENSIPUG00000004905	znf236	60	45.133
ENSIPUG00000003011	-	56	53.680	ENSIPUG00000021472	-	84	53.680
ENSIPUG00000003011	-	56	40.000	ENSIPUG00000000131	snai2	61	40.000
ENSIPUG00000003011	-	56	54.152	ENSIPUG00000021527	-	93	58.874
ENSIPUG00000003011	-	55	45.026	ENSIPUG00000011652	znf648	74	45.263
ENSIPUG00000003011	-	56	62.626	ENSIPUG00000016075	-	99	61.644
ENSIPUG00000003011	-	55	55.782	ENSIPUG00000005733	-	76	57.456
ENSIPUG00000003011	-	65	42.683	ENSIPUG00000017053	prdm12b	68	44.737
ENSIPUG00000003011	-	55	59.690	ENSIPUG00000021515	-	91	59.690
ENSIPUG00000003011	-	55	59.302	ENSIPUG00000021518	-	98	56.098
ENSIPUG00000003011	-	56	31.122	ENSIPUG00000002510	-	57	31.122
ENSIPUG00000003011	-	56	65.294	ENSIPUG00000015601	-	69	65.294
ENSIPUG00000003011	-	58	61.062	ENSIPUG00000015203	-	67	61.062
ENSIPUG00000003011	-	56	65.441	ENSIPUG00000012960	-	93	65.441
ENSIPUG00000003011	-	57	58.800	ENSIPUG00000013065	-	93	57.463
ENSIPUG00000003011	-	55	62.085	ENSIPUG00000003960	-	84	62.085
ENSIPUG00000003011	-	99	58.451	ENSIPUG00000014798	-	95	58.451
ENSIPUG00000003011	-	57	60.000	ENSIPUG00000006936	-	95	60.000
ENSIPUG00000003011	-	56	49.462	ENSIPUG00000013315	-	97	51.793
ENSIPUG00000003011	-	59	60.905	ENSIPUG00000023688	-	99	60.905
ENSIPUG00000003011	-	55	59.535	ENSIPUG00000001941	-	93	59.535
ENSIPUG00000003011	-	57	44.375	ENSIPUG00000012769	gfi1b	54	44.375
ENSIPUG00000003011	-	55	55.124	ENSIPUG00000021441	-	98	59.766
ENSIPUG00000003011	-	91	59.313	ENSIPUG00000017575	-	87	60.038
ENSIPUG00000003011	-	80	38.767	ENSIPUG00000001248	prdm5	99	38.372
ENSIPUG00000003011	-	54	34.524	ENSIPUG00000015037	znf711	52	32.941
ENSIPUG00000003011	-	81	43.590	ENSIPUG00000019544	PRDM12	69	43.590

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000003011	-	72	54.118	ENSOANG00000005426	-	66	53.614	Ornithorhynchus_anatinus