EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000003019 (Gene tree)
Gene ID: 108260908
Gene Symbol: polr1e
Alias: zgc:112501
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 7046 bases
Position: chr29:3035977-3043022
Accession: 108260908
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000004314	RNA_pol_I_A49	PF06870.12	1.7e-101	1	1
ENSIPUP00000004300	RNA_pol_I_A49	PF06870.12	4.4e-88	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000004515	-	1645	XM_017461618	ENSIPUP00000004314	412 (aa)	XP_017317107	A0A2D0QFM8
ENSIPUT00000004501	-	2622	-	ENSIPUP00000004300	426 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000003019's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000003019's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000003019	polr1e	98	44.417	ENSG00000137054	POLR1E	97	44.417	Homo_sapiens
ENSIPUG00000003019	polr1e	99	54.699	ENSAPOG00000012452	polr1e	99	54.699	Acanthochromis_polyacanthus
ENSIPUG00000003019	polr1e	95	40.858	ENSAMEG00000010193	POLR1E	91	40.858	Ailuropoda_melanoleuca
ENSIPUG00000003019	polr1e	94	53.985	ENSACIG00000009884	polr1e	99	53.985	Amphilophus_citrinellus
ENSIPUG00000003019	polr1e	99	57.692	ENSAOCG00000005665	polr1e	99	57.692	Amphiprion_ocellaris
ENSIPUG00000003019	polr1e	99	57.933	ENSAPEG00000020581	polr1e	99	57.933	Amphiprion_percula
ENSIPUG00000003019	polr1e	99	58.313	ENSATEG00000020609	polr1e	99	58.313	Anabas_testudineus
ENSIPUG00000003019	polr1e	80	37.598	ENSAPLG00000010340	POLR1E	99	38.120	Anas_platyrhynchos
ENSIPUG00000003019	polr1e	98	44.175	ENSANAG00000038046	POLR1E	97	44.175	Aotus_nancymaae
ENSIPUG00000003019	polr1e	99	56.250	ENSACLG00000013685	polr1e	99	56.250	Astatotilapia_calliptera
ENSIPUG00000003019	polr1e	100	65.375	ENSAMXG00000018181	polr1e	100	65.375	Astyanax_mexicanus
ENSIPUG00000003019	polr1e	98	43.932	ENSBTAG00000012243	POLR1E	97	43.932	Bos_taurus
ENSIPUG00000003019	polr1e	95	42.821	ENSCJAG00000010512	POLR1E	92	45.405	Callithrix_jacchus
ENSIPUG00000003019	polr1e	98	44.417	ENSCAFG00000002377	POLR1E	97	44.417	Canis_familiaris
ENSIPUG00000003019	polr1e	98	44.417	ENSCAFG00020017851	POLR1E	97	44.417	Canis_lupus_dingo
ENSIPUG00000003019	polr1e	98	43.204	ENSCHIG00000019479	POLR1E	97	43.204	Capra_hircus
ENSIPUG00000003019	polr1e	98	43.204	ENSTSYG00000002075	POLR1E	97	43.204	Carlito_syrichta
ENSIPUG00000003019	polr1e	70	43.986	ENSCAPG00000015653	POLR1E	99	43.986	Cavia_aperea
ENSIPUG00000003019	polr1e	98	44.660	ENSCPOG00000009965	POLR1E	98	44.660	Cavia_porcellus
ENSIPUG00000003019	polr1e	98	41.220	ENSCCAG00000029460	POLR1E	97	41.220	Cebus_capucinus
ENSIPUG00000003019	polr1e	98	43.932	ENSCATG00000031732	POLR1E	97	49.515	Cercocebus_atys
ENSIPUG00000003019	polr1e	86	45.355	ENSCLAG00000012701	POLR1E	95	45.355	Chinchilla_lanigera
ENSIPUG00000003019	polr1e	98	43.932	ENSCSAG00000010782	POLR1E	97	43.932	Chlorocebus_sabaeus
ENSIPUG00000003019	polr1e	95	37.093	ENSCHOG00000013024	POLR1E	83	37.093	Choloepus_hoffmanni
ENSIPUG00000003019	polr1e	100	43.810	ENSCPBG00000006923	POLR1E	100	43.810	Chrysemys_picta_bellii
ENSIPUG00000003019	polr1e	98	43.689	ENSCANG00000036112	POLR1E	97	47.664	Colobus_angolensis_palliatus
ENSIPUG00000003019	polr1e	99	42.686	ENSCGRG00001006197	Polr1e	95	42.686	Cricetulus_griseus_chok1gshd
ENSIPUG00000003019	polr1e	99	42.206	ENSCGRG00000006430	Polr1e	95	42.206	Cricetulus_griseus_crigri
ENSIPUG00000003019	polr1e	100	51.449	ENSCSEG00000005121	polr1e	100	51.449	Cynoglossus_semilaevis
ENSIPUG00000003019	polr1e	99	53.735	ENSCVAG00000019759	polr1e	99	53.735	Cyprinodon_variegatus
ENSIPUG00000003019	polr1e	97	60.945	ENSDARG00000006434	polr1e	99	61.017	Danio_rerio
ENSIPUG00000003019	polr1e	99	38.723	ENSDNOG00000010257	POLR1E	99	38.723	Dasypus_novemcinctus
ENSIPUG00000003019	polr1e	83	41.449	ENSETEG00000018204	POLR1E	96	41.449	Echinops_telfairi
ENSIPUG00000003019	polr1e	58	41.732	ENSEBUG00000010635	-	95	36.782	Eptatretus_burgeri
ENSIPUG00000003019	polr1e	98	43.720	ENSEASG00005000675	POLR1E	97	43.720	Equus_asinus_asinus
ENSIPUG00000003019	polr1e	98	43.720	ENSECAG00000014669	POLR1E	97	43.720	Equus_caballus
ENSIPUG00000003019	polr1e	95	39.141	ENSEEUG00000011928	POLR1E	84	39.141	Erinaceus_europaeus
ENSIPUG00000003019	polr1e	99	56.522	ENSELUG00000008150	polr1e	99	56.522	Esox_lucius
ENSIPUG00000003019	polr1e	99	43.990	ENSFCAG00000013081	POLR1E	98	43.990	Felis_catus
ENSIPUG00000003019	polr1e	95	40.955	ENSFALG00000012950	POLR1E	99	40.955	Ficedula_albicollis
ENSIPUG00000003019	polr1e	98	42.961	ENSFDAG00000016917	POLR1E	98	42.961	Fukomys_damarensis
ENSIPUG00000003019	polr1e	99	53.976	ENSFHEG00000009801	polr1e	99	53.976	Fundulus_heteroclitus
ENSIPUG00000003019	polr1e	99	44.578	ENSGMOG00000003336	POLR1E	98	44.578	Gadus_morhua
ENSIPUG00000003019	polr1e	99	42.553	ENSGALG00000005395	POLR1E	99	42.553	Gallus_gallus
ENSIPUG00000003019	polr1e	99	54.106	ENSGAFG00000004850	polr1e	99	54.106	Gambusia_affinis
ENSIPUG00000003019	polr1e	99	52.392	ENSGACG00000016087	polr1e	99	52.392	Gasterosteus_aculeatus
ENSIPUG00000003019	polr1e	96	40.148	ENSGAGG00000001659	POLR1E	99	39.858	Gopherus_agassizii
ENSIPUG00000003019	polr1e	99	44.019	ENSGGOG00000001882	POLR1E	99	47.706	Gorilla_gorilla
ENSIPUG00000003019	polr1e	99	56.250	ENSHBUG00000002559	polr1e	99	56.250	Haplochromis_burtoni
ENSIPUG00000003019	polr1e	98	43.689	ENSHGLG00000002036	POLR1E	98	43.689	Heterocephalus_glaber_female
ENSIPUG00000003019	polr1e	98	43.932	ENSHGLG00100012784	POLR1E	98	43.932	Heterocephalus_glaber_male
ENSIPUG00000003019	polr1e	99	52.174	ENSHCOG00000002774	polr1e	99	52.174	Hippocampus_comes
ENSIPUG00000003019	polr1e	99	43.405	ENSSTOG00000009810	POLR1E	99	43.405	Ictidomys_tridecemlineatus
ENSIPUG00000003019	polr1e	98	41.990	ENSJJAG00000020731	Polr1e	94	41.990	Jaculus_jaculus
ENSIPUG00000003019	polr1e	99	55.288	ENSKMAG00000000046	polr1e	99	55.288	Kryptolebias_marmoratus
ENSIPUG00000003019	polr1e	100	56.355	ENSLBEG00000003104	polr1e	99	56.595	Labrus_bergylta
ENSIPUG00000003019	polr1e	86	47.253	ENSLACG00000003416	POLR1E	99	47.253	Latimeria_chalumnae
ENSIPUG00000003019	polr1e	99	49.282	ENSLOCG00000012859	polr1e	99	49.282	Lepisosteus_oculatus
ENSIPUG00000003019	polr1e	98	43.689	ENSLAFG00000012831	POLR1E	97	43.689	Loxodonta_africana
ENSIPUG00000003019	polr1e	98	43.932	ENSMFAG00000045465	POLR1E	97	49.515	Macaca_fascicularis
ENSIPUG00000003019	polr1e	98	43.932	ENSMMUG00000017892	POLR1E	97	49.515	Macaca_mulatta
ENSIPUG00000003019	polr1e	98	40.995	ENSMNEG00000040283	POLR1E	91	48.101	Macaca_nemestrina
ENSIPUG00000003019	polr1e	98	43.932	ENSMLEG00000031135	POLR1E	97	49.515	Mandrillus_leucophaeus
ENSIPUG00000003019	polr1e	100	56.595	ENSMAMG00000001260	polr1e	99	56.595	Mastacembelus_armatus
ENSIPUG00000003019	polr1e	99	56.010	ENSMZEG00005021536	polr1e	99	56.010	Maylandia_zebra
ENSIPUG00000003019	polr1e	99	42.926	ENSMAUG00000021044	Polr1e	95	42.926	Mesocricetus_auratus
ENSIPUG00000003019	polr1e	98	44.175	ENSMICG00000003673	POLR1E	97	44.175	Microcebus_murinus
ENSIPUG00000003019	polr1e	98	41.990	ENSMOCG00000012920	Polr1e	94	41.990	Microtus_ochrogaster
ENSIPUG00000003019	polr1e	99	54.940	ENSMMOG00000007391	polr1e	99	54.940	Mola_mola
ENSIPUG00000003019	polr1e	96	44.089	ENSMODG00000002884	POLR1E	98	44.089	Monodelphis_domestica
ENSIPUG00000003019	polr1e	99	56.250	ENSMALG00000002665	polr1e	99	56.250	Monopterus_albus
ENSIPUG00000003019	polr1e	99	42.271	MGP_CAROLIEiJ_G0025967	Polr1e	97	42.714	Mus_caroli
ENSIPUG00000003019	polr1e	99	42.410	ENSMUSG00000028318	Polr1e	97	42.857	Mus_musculus
ENSIPUG00000003019	polr1e	99	42.410	MGP_PahariEiJ_G0024114	Polr1e	97	42.857	Mus_pahari
ENSIPUG00000003019	polr1e	99	42.651	MGP_SPRETEiJ_G0026930	Polr1e	97	43.108	Mus_spretus
ENSIPUG00000003019	polr1e	98	39.177	ENSMPUG00000006040	POLR1E	97	38.661	Mustela_putorius_furo
ENSIPUG00000003019	polr1e	98	44.660	ENSMLUG00000012688	POLR1E	94	44.660	Myotis_lucifugus
ENSIPUG00000003019	polr1e	98	43.932	ENSNGAG00000002520	Polr1e	94	43.932	Nannospalax_galili
ENSIPUG00000003019	polr1e	99	56.010	ENSNBRG00000016822	polr1e	99	56.010	Neolamprologus_brichardi
ENSIPUG00000003019	polr1e	98	44.660	ENSNLEG00000003616	POLR1E	97	49.515	Nomascus_leucogenys
ENSIPUG00000003019	polr1e	73	48.182	ENSMEUG00000015372	-	79	48.182	Notamacropus_eugenii
ENSIPUG00000003019	polr1e	86	38.781	ENSOPRG00000014206	POLR1E	99	38.781	Ochotona_princeps
ENSIPUG00000003019	polr1e	99	44.819	ENSODEG00000014565	POLR1E	96	44.819	Octodon_degus
ENSIPUG00000003019	polr1e	99	55.769	ENSONIG00000008921	polr1e	99	55.769	Oreochromis_niloticus
ENSIPUG00000003019	polr1e	99	43.133	ENSOCUG00000024773	POLR1E	98	43.373	Oryctolagus_cuniculus
ENSIPUG00000003019	polr1e	99	56.145	ENSORLG00000005143	polr1e	99	56.145	Oryzias_latipes
ENSIPUG00000003019	polr1e	95	54.103	ENSORLG00020007271	polr1e	99	54.805	Oryzias_latipes_hni
ENSIPUG00000003019	polr1e	99	56.145	ENSORLG00015000137	polr1e	99	56.145	Oryzias_latipes_hsok
ENSIPUG00000003019	polr1e	99	53.976	ENSOMEG00000013264	polr1e	98	53.976	Oryzias_melastigma
ENSIPUG00000003019	polr1e	98	43.932	ENSOGAG00000012981	POLR1E	95	43.932	Otolemur_garnettii
ENSIPUG00000003019	polr1e	98	42.961	ENSOARG00000011465	POLR1E	94	42.961	Ovis_aries
ENSIPUG00000003019	polr1e	98	44.417	ENSPPAG00000034566	POLR1E	97	49.515	Pan_paniscus
ENSIPUG00000003019	polr1e	99	44.231	ENSPPRG00000005649	POLR1E	98	44.231	Panthera_pardus
ENSIPUG00000003019	polr1e	99	43.990	ENSPTIG00000009774	POLR1E	98	43.990	Panthera_tigris_altaica
ENSIPUG00000003019	polr1e	98	44.417	ENSPTRG00000020944	POLR1E	97	49.515	Pan_troglodytes
ENSIPUG00000003019	polr1e	98	43.932	ENSPANG00000025563	POLR1E	97	49.515	Papio_anubis
ENSIPUG00000003019	polr1e	99	51.905	ENSPKIG00000003562	polr1e	99	51.905	Paramormyrops_kingsleyae
ENSIPUG00000003019	polr1e	96	43.392	ENSPSIG00000003274	POLR1E	93	44.140	Pelodiscus_sinensis
ENSIPUG00000003019	polr1e	96	51.899	ENSPMGG00000024169	polr1e	96	51.899	Periophthalmus_magnuspinnatus
ENSIPUG00000003019	polr1e	98	42.718	ENSPEMG00000019151	-	94	42.718	Peromyscus_maniculatus_bairdii
ENSIPUG00000003019	polr1e	98	36.275	ENSPEMG00000022300	-	93	36.275	Peromyscus_maniculatus_bairdii
ENSIPUG00000003019	polr1e	98	44.175	ENSPCIG00000014798	POLR1E	99	44.175	Phascolarctos_cinereus
ENSIPUG00000003019	polr1e	99	51.136	ENSPFOG00000019627	polr1e	99	51.136	Poecilia_formosa
ENSIPUG00000003019	polr1e	99	54.106	ENSPLAG00000022679	polr1e	99	54.106	Poecilia_latipinna
ENSIPUG00000003019	polr1e	86	55.028	ENSPMEG00000022123	polr1e	93	55.028	Poecilia_mexicana
ENSIPUG00000003019	polr1e	99	53.865	ENSPREG00000009470	polr1e	99	53.865	Poecilia_reticulata
ENSIPUG00000003019	polr1e	98	43.932	ENSPPYG00000019061	POLR1E	97	43.932	Pongo_abelii
ENSIPUG00000003019	polr1e	51	38.710	ENSPCAG00000004891	POLR1E	69	38.710	Procavia_capensis
ENSIPUG00000003019	polr1e	95	44.836	ENSPCOG00000027448	POLR1E	94	44.836	Propithecus_coquereli
ENSIPUG00000003019	polr1e	95	45.113	ENSPVAG00000007940	POLR1E	83	45.113	Pteropus_vampyrus
ENSIPUG00000003019	polr1e	99	56.490	ENSPNYG00000001032	polr1e	99	56.490	Pundamilia_nyererei
ENSIPUG00000003019	polr1e	99	67.470	ENSPNAG00000006987	polr1e	99	67.470	Pygocentrus_nattereri
ENSIPUG00000003019	polr1e	98	41.505	ENSRNOG00000012664	Polr1e	94	41.505	Rattus_norvegicus
ENSIPUG00000003019	polr1e	96	44.250	ENSRBIG00000034214	POLR1E	99	44.531	Rhinopithecus_bieti
ENSIPUG00000003019	polr1e	98	43.932	ENSRROG00000031986	POLR1E	97	49.515	Rhinopithecus_roxellana
ENSIPUG00000003019	polr1e	98	44.175	ENSSBOG00000021415	POLR1E	97	44.175	Saimiri_boliviensis_boliviensis
ENSIPUG00000003019	polr1e	86	42.936	ENSSHAG00000016084	POLR1E	99	42.936	Sarcophilus_harrisii
ENSIPUG00000003019	polr1e	100	53.444	ENSSFOG00015002293	polr1e	100	53.444	Scleropages_formosus
ENSIPUG00000003019	polr1e	99	56.132	ENSSMAG00000011672	polr1e	93	56.132	Scophthalmus_maximus
ENSIPUG00000003019	polr1e	99	56.490	ENSSDUG00000022279	polr1e	99	56.490	Seriola_dumerili
ENSIPUG00000003019	polr1e	99	56.731	ENSSLDG00000024918	polr1e	99	56.731	Seriola_lalandi_dorsalis
ENSIPUG00000003019	polr1e	56	39.914	ENSSARG00000009810	-	58	39.914	Sorex_araneus
ENSIPUG00000003019	polr1e	99	43.914	ENSSPUG00000009499	POLR1E	99	43.914	Sphenodon_punctatus
ENSIPUG00000003019	polr1e	99	57.349	ENSSPAG00000021240	polr1e	99	57.349	Stegastes_partitus
ENSIPUG00000003019	polr1e	98	44.660	ENSSSCG00000005347	POLR1E	97	44.660	Sus_scrofa
ENSIPUG00000003019	polr1e	95	36.444	ENSTGUG00000007169	POLR1E	99	36.444	Taeniopygia_guttata
ENSIPUG00000003019	polr1e	100	55.131	ENSTRUG00000020779	polr1e	100	56.168	Takifugu_rubripes
ENSIPUG00000003019	polr1e	100	53.477	ENSTNIG00000017812	polr1e	100	53.477	Tetraodon_nigroviridis
ENSIPUG00000003019	polr1e	95	43.829	ENSTBEG00000013786	POLR1E	84	43.829	Tupaia_belangeri
ENSIPUG00000003019	polr1e	95	44.665	ENSTTRG00000008294	POLR1E	85	44.665	Tursiops_truncatus
ENSIPUG00000003019	polr1e	95	45.592	ENSUAMG00000012474	POLR1E	97	45.404	Ursus_americanus
ENSIPUG00000003019	polr1e	95	45.592	ENSUMAG00000011496	POLR1E	94	45.592	Ursus_maritimus
ENSIPUG00000003019	polr1e	82	42.733	ENSVPAG00000009048	POLR1E	81	42.733	Vicugna_pacos
ENSIPUG00000003019	polr1e	99	44.337	ENSVVUG00000019954	POLR1E	98	44.337	Vulpes_vulpes
ENSIPUG00000003019	polr1e	99	42.453	ENSXETG00000006533	polr1e	99	42.453	Xenopus_tropicalis
ENSIPUG00000003019	polr1e	99	52.058	ENSXCOG00000013706	polr1e	99	52.058	Xiphophorus_couchianus
ENSIPUG00000003019	polr1e	99	54.348	ENSXMAG00000012484	polr1e	99	54.348	Xiphophorus_maculatus