EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000003043 (Gene tree)
Gene ID: 108271156
Gene Symbol: zmat3
Alias: zmp:0000000878
Full Name: zinc finger matrin-type 3
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 12270 bases
Position: chr10:20201633-20213902
Accession: 108271156
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000004378	zf-met	PF12874.7	1.6e-23	1	3
ENSIPUP00000004378	zf-met	PF12874.7	1.6e-23	2	3
ENSIPUP00000004378	zf-met	PF12874.7	1.6e-23	3	3
ENSIPUP00000004351	zf-met	PF12874.7	4.5e-23	1	3
ENSIPUP00000004351	zf-met	PF12874.7	4.5e-23	2	3
ENSIPUP00000004351	zf-met	PF12874.7	4.5e-23	3	3
ENSIPUP00000004359	zf-met	PF12874.7	5.9e-23	1	3
ENSIPUP00000004359	zf-met	PF12874.7	5.9e-23	2	3
ENSIPUP00000004359	zf-met	PF12874.7	5.9e-23	3	3
ENSIPUP00000004378	zf-C2H2_jaz	PF12171.8	2.6e-21	1	3
ENSIPUP00000004378	zf-C2H2_jaz	PF12171.8	2.6e-21	2	3
ENSIPUP00000004378	zf-C2H2_jaz	PF12171.8	2.6e-21	3	3
ENSIPUP00000004351	zf-C2H2_jaz	PF12171.8	7.2e-21	1	3
ENSIPUP00000004351	zf-C2H2_jaz	PF12171.8	7.2e-21	2	3
ENSIPUP00000004351	zf-C2H2_jaz	PF12171.8	7.2e-21	3	3
ENSIPUP00000004359	zf-C2H2_jaz	PF12171.8	9.6e-21	1	3
ENSIPUP00000004359	zf-C2H2_jaz	PF12171.8	9.6e-21	2	3
ENSIPUP00000004359	zf-C2H2_jaz	PF12171.8	9.6e-21	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000004581	-	825	-	ENSIPUP00000004378	274 (aa)	-	-
ENSIPUT00000004552	-	1383	XM_017478500	ENSIPUP00000004351	365 (aa)	XP_017333989	A0A2D0RU19
ENSIPUT00000004560	-	1254	XM_017478498	ENSIPUP00000004359	393 (aa)	XP_017333987	A0A2D0RU07

Gene Model

Click here to download ENSIPUG00000003043's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu04115	p53 signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000003043's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000003043	zmat3	50	34.839	ENSIPUG00000006892	znf346	55	37.607
ENSIPUG00000003043	zmat3	53	34.579	ENSIPUG00000022248	zmat4	79	33.621

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000003043	zmat3	94	68.605	ENSG00000172667	ZMAT3	93	66.300	Homo_sapiens
ENSIPUG00000003043	zmat3	98	62.207	ENSAPOG00000015037	zmat3	100	60.256	Acanthochromis_polyacanthus
ENSIPUG00000003043	zmat3	99	64.599	ENSAMEG00000010742	ZMAT3	93	64.599	Ailuropoda_melanoleuca
ENSIPUG00000003043	zmat3	84	72.103	ENSACIG00000023037	zmat3	97	59.202	Amphilophus_citrinellus
ENSIPUG00000003043	zmat3	98	62.081	ENSAOCG00000017955	zmat3	100	58.769	Amphiprion_ocellaris
ENSIPUG00000003043	zmat3	84	71.795	ENSAPEG00000014553	zmat3	97	60.797	Amphiprion_percula
ENSIPUG00000003043	zmat3	84	71.368	ENSATEG00000022244	zmat3	94	64.815	Anabas_testudineus
ENSIPUG00000003043	zmat3	86	71.008	ENSAPLG00000013292	ZMAT3	93	63.082	Anas_platyrhynchos
ENSIPUG00000003043	zmat3	86	68.776	ENSACAG00000005005	ZMAT3	98	60.333	Anolis_carolinensis
ENSIPUG00000003043	zmat3	93	63.566	ENSANAG00000035673	ZMAT3	94	60.289	Aotus_nancymaae
ENSIPUG00000003043	zmat3	84	72.222	ENSACLG00000026272	zmat3	100	60.000	Astatotilapia_calliptera
ENSIPUG00000003043	zmat3	100	77.049	ENSAMXG00000009798	zmat3	100	77.049	Astyanax_mexicanus
ENSIPUG00000003043	zmat3	94	67.954	ENSBTAG00000012463	ZMAT3	93	66.058	Bos_taurus
ENSIPUG00000003043	zmat3	99	65.328	ENSCJAG00000013399	ZMAT3	98	62.457	Callithrix_jacchus
ENSIPUG00000003043	zmat3	99	66.788	ENSCAFG00000011081	ZMAT3	93	67.153	Canis_familiaris
ENSIPUG00000003043	zmat3	99	66.788	ENSCAFG00020023107	ZMAT3	93	67.153	Canis_lupus_dingo
ENSIPUG00000003043	zmat3	94	68.217	ENSCHIG00000025074	ZMAT3	93	66.300	Capra_hircus
ENSIPUG00000003043	zmat3	99	65.201	ENSTSYG00000026546	ZMAT3	93	65.201	Carlito_syrichta
ENSIPUG00000003043	zmat3	99	66.300	ENSCAPG00000014645	ZMAT3	93	66.300	Cavia_aperea
ENSIPUG00000003043	zmat3	99	66.300	ENSCPOG00000003865	ZMAT3	93	66.300	Cavia_porcellus
ENSIPUG00000003043	zmat3	99	65.568	ENSCCAG00000036721	ZMAT3	98	62.457	Cebus_capucinus
ENSIPUG00000003043	zmat3	88	61.411	ENSCATG00000025137	ZMAT3	94	55.477	Cercocebus_atys
ENSIPUG00000003043	zmat3	99	65.934	ENSCLAG00000013464	ZMAT3	93	65.934	Chinchilla_lanigera
ENSIPUG00000003043	zmat3	94	68.217	ENSCSAG00000012935	ZMAT3	93	65.568	Chlorocebus_sabaeus
ENSIPUG00000003043	zmat3	94	67.442	ENSCHOG00000005591	ZMAT3	93	65.201	Choloepus_hoffmanni
ENSIPUG00000003043	zmat3	84	68.398	ENSCPBG00000026917	ZMAT3	92	61.314	Chrysemys_picta_bellii
ENSIPUG00000003043	zmat3	94	67.954	ENSCANG00000029476	ZMAT3	93	65.693	Colobus_angolensis_palliatus
ENSIPUG00000003043	zmat3	99	64.835	ENSCGRG00001012339	Zmat3	93	64.835	Cricetulus_griseus_chok1gshd
ENSIPUG00000003043	zmat3	99	64.835	ENSCGRG00000011491	Zmat3	93	64.835	Cricetulus_griseus_crigri
ENSIPUG00000003043	zmat3	89	67.729	ENSCSEG00000019463	zmat3	91	70.213	Cynoglossus_semilaevis
ENSIPUG00000003043	zmat3	89	66.926	ENSCVAG00000011847	zmat3	96	58.521	Cyprinodon_variegatus
ENSIPUG00000003043	zmat3	100	71.858	ENSDARG00000080021	zmat3	100	74.603	Danio_rerio
ENSIPUG00000003043	zmat3	94	67.181	ENSDNOG00000012284	ZMAT3	93	64.964	Dasypus_novemcinctus
ENSIPUG00000003043	zmat3	88	69.421	ENSDORG00000011801	Zmat3	93	64.469	Dipodomys_ordii
ENSIPUG00000003043	zmat3	80	60.000	ENSETEG00000008883	ZMAT3	92	60.000	Echinops_telfairi
ENSIPUG00000003043	zmat3	88	68.595	ENSEASG00005016887	ZMAT3	93	64.469	Equus_asinus_asinus
ENSIPUG00000003043	zmat3	88	68.595	ENSECAG00000012784	ZMAT3	93	64.469	Equus_caballus
ENSIPUG00000003043	zmat3	99	57.664	ENSEEUG00000001126	ZMAT3	94	57.664	Erinaceus_europaeus
ENSIPUG00000003043	zmat3	100	64.752	ENSELUG00000010132	zmat3	99	65.885	Esox_lucius
ENSIPUG00000003043	zmat3	99	65.201	ENSFCAG00000014578	ZMAT3	93	65.201	Felis_catus
ENSIPUG00000003043	zmat3	99	64.964	ENSFALG00000008403	ZMAT3	93	64.964	Ficedula_albicollis
ENSIPUG00000003043	zmat3	99	65.328	ENSFDAG00000013376	ZMAT3	93	65.328	Fukomys_damarensis
ENSIPUG00000003043	zmat3	88	69.959	ENSFHEG00000003221	zmat3	92	65.672	Fundulus_heteroclitus
ENSIPUG00000003043	zmat3	84	69.231	ENSGMOG00000008558	zmat3	96	69.231	Gadus_morhua
ENSIPUG00000003043	zmat3	99	64.599	ENSGALG00000040948	ZMAT3	92	71.308	Gallus_gallus
ENSIPUG00000003043	zmat3	61	65.341	ENSGAFG00000010485	zmat3	61	65.341	Gambusia_affinis
ENSIPUG00000003043	zmat3	84	68.670	ENSGACG00000006175	zmat3	98	63.273	Gasterosteus_aculeatus
ENSIPUG00000003043	zmat3	84	69.697	ENSGAGG00000009275	ZMAT3	92	61.679	Gopherus_agassizii
ENSIPUG00000003043	zmat3	94	68.605	ENSGGOG00000009975	ZMAT3	93	66.300	Gorilla_gorilla
ENSIPUG00000003043	zmat3	84	72.222	ENSHBUG00000004401	zmat3	98	60.667	Haplochromis_burtoni
ENSIPUG00000003043	zmat3	88	70.248	ENSHGLG00000011523	ZMAT3	84	70.248	Heterocephalus_glaber_female
ENSIPUG00000003043	zmat3	88	70.248	ENSHGLG00100012235	ZMAT3	84	70.248	Heterocephalus_glaber_male
ENSIPUG00000003043	zmat3	83	71.053	ENSHCOG00000010624	zmat3	97	56.364	Hippocampus_comes
ENSIPUG00000003043	zmat3	94	68.605	ENSSTOG00000028436	ZMAT3	93	66.300	Ictidomys_tridecemlineatus
ENSIPUG00000003043	zmat3	94	66.409	ENSJJAG00000004288	Zmat3	97	62.543	Jaculus_jaculus
ENSIPUG00000003043	zmat3	93	65.672	ENSKMAG00000008962	zmat3	93	66.284	Kryptolebias_marmoratus
ENSIPUG00000003043	zmat3	88	68.699	ENSLBEG00000001993	zmat3	90	64.259	Labrus_bergylta
ENSIPUG00000003043	zmat3	84	65.702	ENSLACG00000015780	ZMAT3	66	66.942	Latimeria_chalumnae
ENSIPUG00000003043	zmat3	100	61.126	ENSLOCG00000001108	zmat3	100	62.567	Lepisosteus_oculatus
ENSIPUG00000003043	zmat3	94	68.340	ENSLAFG00000000897	ZMAT3	93	66.058	Loxodonta_africana
ENSIPUG00000003043	zmat3	94	68.217	ENSMFAG00000021292	ZMAT3	93	65.568	Macaca_fascicularis
ENSIPUG00000003043	zmat3	94	67.568	ENSMMUG00000003216	ZMAT3	93	64.964	Macaca_mulatta
ENSIPUG00000003043	zmat3	94	67.568	ENSMNEG00000036725	ZMAT3	93	64.964	Macaca_nemestrina
ENSIPUG00000003043	zmat3	88	69.835	ENSMLEG00000026279	ZMAT3	95	62.898	Mandrillus_leucophaeus
ENSIPUG00000003043	zmat3	98	62.069	ENSMAMG00000012349	zmat3	100	57.716	Mastacembelus_armatus
ENSIPUG00000003043	zmat3	84	72.222	ENSMZEG00005015427	zmat3	100	60.923	Maylandia_zebra
ENSIPUG00000003043	zmat3	99	64.599	ENSMGAG00000009873	ZMAT3	93	64.599	Meleagris_gallopavo
ENSIPUG00000003043	zmat3	99	64.103	ENSMAUG00000001986	Zmat3	93	64.103	Mesocricetus_auratus
ENSIPUG00000003043	zmat3	99	65.934	ENSMICG00000049501	ZMAT3	97	63.066	Microcebus_murinus
ENSIPUG00000003043	zmat3	99	64.835	ENSMOCG00000018844	Zmat3	93	64.835	Microtus_ochrogaster
ENSIPUG00000003043	zmat3	84	70.563	ENSMMOG00000001603	zmat3	86	61.486	Mola_mola
ENSIPUG00000003043	zmat3	95	62.357	ENSMODG00000021308	ZMAT3	89	58.947	Monodelphis_domestica
ENSIPUG00000003043	zmat3	100	62.681	ENSMALG00000019683	zmat3	98	60.201	Monopterus_albus
ENSIPUG00000003043	zmat3	99	63.504	MGP_CAROLIEiJ_G0024914	Zmat3	93	63.504	Mus_caroli
ENSIPUG00000003043	zmat3	99	63.504	ENSMUSG00000027663	Zmat3	93	63.504	Mus_musculus
ENSIPUG00000003043	zmat3	99	63.273	MGP_PahariEiJ_G0026359	Zmat3	93	63.273	Mus_pahari
ENSIPUG00000003043	zmat3	99	63.869	MGP_SPRETEiJ_G0025848	Zmat3	93	63.869	Mus_spretus
ENSIPUG00000003043	zmat3	99	66.300	ENSMPUG00000017206	ZMAT3	93	66.300	Mustela_putorius_furo
ENSIPUG00000003043	zmat3	99	63.309	ENSMLUG00000013074	ZMAT3	93	63.309	Myotis_lucifugus
ENSIPUG00000003043	zmat3	94	68.217	ENSNGAG00000023602	Zmat3	93	66.300	Nannospalax_galili
ENSIPUG00000003043	zmat3	84	72.222	ENSNBRG00000020886	zmat3	98	60.667	Neolamprologus_brichardi
ENSIPUG00000003043	zmat3	94	67.568	ENSNLEG00000005658	ZMAT3	93	65.328	Nomascus_leucogenys
ENSIPUG00000003043	zmat3	99	65.580	ENSMEUG00000015724	ZMAT3	93	66.304	Notamacropus_eugenii
ENSIPUG00000003043	zmat3	99	65.568	ENSODEG00000003313	ZMAT3	93	65.568	Octodon_degus
ENSIPUG00000003043	zmat3	84	70.539	ENSONIG00000008388	zmat3	96	61.238	Oreochromis_niloticus
ENSIPUG00000003043	zmat3	86	63.277	ENSOANG00000009901	ZMAT3	76	55.769	Ornithorhynchus_anatinus
ENSIPUG00000003043	zmat3	94	67.181	ENSOCUG00000004658	ZMAT3	93	65.201	Oryctolagus_cuniculus
ENSIPUG00000003043	zmat3	90	68.033	ENSORLG00000011575	zmat3	98	55.966	Oryzias_latipes
ENSIPUG00000003043	zmat3	89	69.421	ENSORLG00020005858	zmat3	98	55.682	Oryzias_latipes_hni
ENSIPUG00000003043	zmat3	90	68.980	ENSORLG00015003707	zmat3	71	65.185	Oryzias_latipes_hsok
ENSIPUG00000003043	zmat3	90	68.571	ENSOMEG00000011303	zmat3	98	56.818	Oryzias_melastigma
ENSIPUG00000003043	zmat3	94	67.181	ENSOGAG00000003252	ZMAT3	93	65.328	Otolemur_garnettii
ENSIPUG00000003043	zmat3	94	67.954	ENSOARG00000020713	ZMAT3	93	66.058	Ovis_aries
ENSIPUG00000003043	zmat3	94	68.605	ENSPPAG00000035483	ZMAT3	93	66.300	Pan_paniscus
ENSIPUG00000003043	zmat3	99	65.328	ENSPPRG00000004407	ZMAT3	93	65.328	Panthera_pardus
ENSIPUG00000003043	zmat3	99	65.328	ENSPTIG00000009929	ZMAT3	93	65.328	Panthera_tigris_altaica
ENSIPUG00000003043	zmat3	94	67.954	ENSPTRG00000015641	ZMAT3	93	65.693	Pan_troglodytes
ENSIPUG00000003043	zmat3	85	71.795	ENSPANG00000023167	ZMAT3	95	62.898	Papio_anubis
ENSIPUG00000003043	zmat3	100	67.213	ENSPKIG00000023370	zmat3	100	68.120	Paramormyrops_kingsleyae
ENSIPUG00000003043	zmat3	99	64.469	ENSPSIG00000014839	ZMAT3	92	64.469	Pelodiscus_sinensis
ENSIPUG00000003043	zmat3	83	69.565	ENSPMGG00000023924	zmat3	96	61.397	Periophthalmus_magnuspinnatus
ENSIPUG00000003043	zmat3	99	64.469	ENSPEMG00000019154	Zmat3	93	64.469	Peromyscus_maniculatus_bairdii
ENSIPUG00000003043	zmat3	99	63.345	ENSPFOG00000019206	zmat3	98	58.377	Poecilia_formosa
ENSIPUG00000003043	zmat3	84	72.961	ENSPLAG00000022572	zmat3	92	64.835	Poecilia_latipinna
ENSIPUG00000003043	zmat3	89	65.432	ENSPMEG00000004131	-	88	62.264	Poecilia_mexicana
ENSIPUG00000003043	zmat3	99	63.121	ENSPREG00000022632	zmat3	92	67.041	Poecilia_reticulata
ENSIPUG00000003043	zmat3	94	67.954	ENSPPYG00000014315	ZMAT3	93	65.693	Pongo_abelii
ENSIPUG00000003043	zmat3	94	66.923	ENSPCAG00000008585	ZMAT3	89	66.923	Procavia_capensis
ENSIPUG00000003043	zmat3	99	65.568	ENSPCOG00000022835	ZMAT3	93	65.568	Propithecus_coquereli
ENSIPUG00000003043	zmat3	99	64.964	ENSPVAG00000004489	ZMAT3	93	64.964	Pteropus_vampyrus
ENSIPUG00000003043	zmat3	84	72.222	ENSPNYG00000014350	zmat3	98	60.667	Pundamilia_nyererei
ENSIPUG00000003043	zmat3	100	80.055	ENSPNAG00000015664	zmat3	100	80.055	Pygocentrus_nattereri
ENSIPUG00000003043	zmat3	99	63.736	ENSRNOG00000010119	Zmat3	93	63.736	Rattus_norvegicus
ENSIPUG00000003043	zmat3	94	67.829	ENSRBIG00000029622	ZMAT3	93	65.568	Rhinopithecus_bieti
ENSIPUG00000003043	zmat3	94	67.181	ENSRROG00000038345	ZMAT3	93	64.964	Rhinopithecus_roxellana
ENSIPUG00000003043	zmat3	94	67.829	ENSSBOG00000033332	ZMAT3	98	62.329	Saimiri_boliviensis_boliviensis
ENSIPUG00000003043	zmat3	99	65.455	ENSSHAG00000016154	ZMAT3	93	65.455	Sarcophilus_harrisii
ENSIPUG00000003043	zmat3	86	76.250	ENSSFOG00015006984	zmat3	99	70.530	Scleropages_formosus
ENSIPUG00000003043	zmat3	88	67.063	ENSSMAG00000019540	-	64	60.526	Scophthalmus_maximus
ENSIPUG00000003043	zmat3	84	70.886	ENSSDUG00000016188	zmat3	97	59.878	Seriola_dumerili
ENSIPUG00000003043	zmat3	100	62.245	ENSSLDG00000018611	zmat3	97	59.878	Seriola_lalandi_dorsalis
ENSIPUG00000003043	zmat3	67	62.500	ENSSARG00000004901	ZMAT3	89	59.799	Sorex_araneus
ENSIPUG00000003043	zmat3	86	68.067	ENSSPUG00000014753	ZMAT3	83	68.067	Sphenodon_punctatus
ENSIPUG00000003043	zmat3	84	71.368	ENSSPAG00000011062	zmat3	88	61.000	Stegastes_partitus
ENSIPUG00000003043	zmat3	99	65.328	ENSSSCG00000033860	ZMAT3	94	65.328	Sus_scrofa
ENSIPUG00000003043	zmat3	99	64.599	ENSTGUG00000010765	-	93	64.599	Taeniopygia_guttata
ENSIPUG00000003043	zmat3	84	71.983	ENSTRUG00000004788	zmat3	92	71.983	Takifugu_rubripes
ENSIPUG00000003043	zmat3	100	61.511	ENSTNIG00000006781	zmat3	93	61.511	Tetraodon_nigroviridis
ENSIPUG00000003043	zmat3	80	75.000	ENSTBEG00000012359	ZMAT3	95	75.000	Tupaia_belangeri
ENSIPUG00000003043	zmat3	88	67.901	ENSTTRG00000004923	ZMAT3	93	64.234	Tursiops_truncatus
ENSIPUG00000003043	zmat3	99	64.234	ENSUAMG00000007623	ZMAT3	93	64.234	Ursus_americanus
ENSIPUG00000003043	zmat3	99	65.201	ENSUMAG00000007847	ZMAT3	93	65.201	Ursus_maritimus
ENSIPUG00000003043	zmat3	88	69.959	ENSVPAG00000006611	ZMAT3	84	69.959	Vicugna_pacos
ENSIPUG00000003043	zmat3	99	66.788	ENSVVUG00000004729	ZMAT3	93	67.153	Vulpes_vulpes
ENSIPUG00000003043	zmat3	86	65.254	ENSXETG00000007251	zmat3	89	60.517	Xenopus_tropicalis
ENSIPUG00000003043	zmat3	85	72.152	ENSXCOG00000008397	zmat3	96	64.311	Xiphophorus_couchianus
ENSIPUG00000003043	zmat3	88	69.076	ENSXMAG00000015188	zmat3	81	59.816	Xiphophorus_maculatus