EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000003046 (Gene tree)
Gene ID: -
Gene Symbol: znf516
Alias: si:ch211-135j15.1
Full Name: zinc finger protein 516-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 17992 bases
Position: chr24:13315310-13333301
Accession: 108257188
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000004354	zf-C2H2	PF00096.26	9.9e-33	1	5
ENSIPUP00000004354	zf-C2H2	PF00096.26	9.9e-33	2	5
ENSIPUP00000004354	zf-C2H2	PF00096.26	9.9e-33	3	5
ENSIPUP00000004354	zf-C2H2	PF00096.26	9.9e-33	4	5
ENSIPUP00000004354	zf-C2H2	PF00096.26	9.9e-33	5	5
ENSIPUP00000004354	zf-met	PF12874.7	2.9e-05	1	2
ENSIPUP00000004354	zf-met	PF12874.7	2.9e-05	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000004555	-	3201	XM_017454718	ENSIPUP00000004354	1066 (aa)	XP_017310207	-

Gene Model

Click here to download ENSIPUG00000003046's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000003046's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000003046	znf516	100	68.178	ENSAMXG00000011137	znf516	99	68.750	Astyanax_mexicanus
ENSIPUG00000003046	znf516	99	63.057	ENSDARG00000070809	znf516	99	63.057	Danio_rerio
ENSIPUG00000003046	znf516	100	75.000	ENSPNAG00000017286	znf516	100	75.000	Pygocentrus_nattereri