EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000003181 (Gene tree)
Gene ID: 108266493
Gene Symbol: parp4
Alias: si:dkey-174k18.1
Full Name: poly(ADP-ribose) polymerase family member 4
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 22915 bases
Position: chr6:710147-733061
Accession: 108266493
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000004582	PARP	PF00644.20	1.4e-28	1	1
ENSIPUP00000004557	PARP	PF00644.20	1.5e-28	1	1
ENSIPUP00000004534	PARP	PF00644.20	1.6e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000004790	-	5753	-	ENSIPUP00000004582	1789 (aa)	-	-
ENSIPUT00000004740	-	8893	-	ENSIPUP00000004534	1861 (aa)	-	-
ENSIPUT00000004762	-	5831	XM_017469881	ENSIPUP00000004557	1815 (aa)	XP_017325370	-

Gene Model

Click here to download ENSIPUG00000003181's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03410	Base excision repair	KEGG
ipu04210	Apoptosis	KEGG
ipu04217	Necroptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000003181's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000003181	parp4	83	46.822	ENSG00000102699	PARP4	79	46.940	Homo_sapiens
ENSIPUG00000003181	parp4	69	60.737	ENSAPOG00000020678	parp4	96	60.763	Acanthochromis_polyacanthus
ENSIPUG00000003181	parp4	76	46.391	ENSAMEG00000017377	PARP4	99	46.748	Ailuropoda_melanoleuca
ENSIPUG00000003181	parp4	71	65.144	ENSACIG00000021890	parp4	99	64.549	Amphilophus_citrinellus
ENSIPUG00000003181	parp4	78	60.945	ENSAPEG00000014531	parp4	70	59.016	Amphiprion_percula
ENSIPUG00000003181	parp4	68	63.554	ENSATEG00000023758	parp4	82	62.975	Anabas_testudineus
ENSIPUG00000003181	parp4	68	49.032	ENSAPLG00000005053	PARP4	99	51.804	Anas_platyrhynchos
ENSIPUG00000003181	parp4	76	45.528	ENSACAG00000001725	PARP4	76	45.528	Anolis_carolinensis
ENSIPUG00000003181	parp4	76	46.532	ENSANAG00000021254	PARP4	80	46.532	Aotus_nancymaae
ENSIPUG00000003181	parp4	77	62.410	ENSACLG00000009783	parp4	75	61.568	Astatotilapia_calliptera
ENSIPUG00000003181	parp4	77	79.268	ENSAMXG00000016657	parp4	80	79.268	Astyanax_mexicanus
ENSIPUG00000003181	parp4	78	46.822	ENSBTAG00000025400	PARP4	76	46.822	Bos_taurus
ENSIPUG00000003181	parp4	78	46.769	ENSCJAG00000004452	PARP4	80	46.926	Callithrix_jacchus
ENSIPUG00000003181	parp4	75	46.259	ENSCAFG00000007375	PARP4	85	46.296	Canis_familiaris
ENSIPUG00000003181	parp4	79	44.844	ENSCAFG00020002104	PARP4	99	45.307	Canis_lupus_dingo
ENSIPUG00000003181	parp4	78	47.352	ENSCHIG00000016066	PARP4	80	47.352	Capra_hircus
ENSIPUG00000003181	parp4	86	45.737	ENSTSYG00000014701	PARP4	85	45.775	Carlito_syrichta
ENSIPUG00000003181	parp4	76	44.777	ENSCPOG00000014672	PARP4	80	44.805	Cavia_porcellus
ENSIPUG00000003181	parp4	77	46.521	ENSCCAG00000032863	PARP4	81	46.521	Cebus_capucinus
ENSIPUG00000003181	parp4	88	45.543	ENSCATG00000035770	PARP4	79	45.617	Cercocebus_atys
ENSIPUG00000003181	parp4	88	46.822	ENSCSAG00000018004	PARP4	80	46.940	Chlorocebus_sabaeus
ENSIPUG00000003181	parp4	51	51.163	ENSCHOG00000006882	-	74	51.163	Choloepus_hoffmanni
ENSIPUG00000003181	parp4	77	47.381	ENSCPBG00000020893	PARP4	80	47.381	Chrysemys_picta_bellii
ENSIPUG00000003181	parp4	76	45.324	ENSCANG00000014573	PARP4	79	45.324	Colobus_angolensis_palliatus
ENSIPUG00000003181	parp4	75	45.884	ENSCGRG00001021886	Parp4	78	45.884	Cricetulus_griseus_chok1gshd
ENSIPUG00000003181	parp4	75	45.884	ENSCGRG00000011944	Parp4	77	45.884	Cricetulus_griseus_crigri
ENSIPUG00000003181	parp4	76	58.119	ENSCSEG00000004631	parp4	87	57.895	Cynoglossus_semilaevis
ENSIPUG00000003181	parp4	70	62.121	ENSCVAG00000010227	parp4	100	62.241	Cyprinodon_variegatus
ENSIPUG00000003181	parp4	77	71.990	ENSDARG00000069934	parp4	86	66.043	Danio_rerio
ENSIPUG00000003181	parp4	76	47.407	ENSDNOG00000037733	PARP4	71	47.449	Dasypus_novemcinctus
ENSIPUG00000003181	parp4	76	46.487	ENSDORG00000029090	Parp4	98	45.770	Dipodomys_ordii
ENSIPUG00000003181	parp4	87	42.780	ENSEASG00005000229	PARP4	96	50.359	Equus_asinus_asinus
ENSIPUG00000003181	parp4	87	42.070	ENSECAG00000009458	PARP4	96	42.070	Equus_caballus
ENSIPUG00000003181	parp4	76	66.100	ENSELUG00000005711	parp4	80	63.914	Esox_lucius
ENSIPUG00000003181	parp4	76	47.321	ENSFCAG00000031561	PARP4	81	47.321	Felis_catus
ENSIPUG00000003181	parp4	77	45.601	ENSFDAG00000010439	PARP4	80	45.823	Fukomys_damarensis
ENSIPUG00000003181	parp4	68	61.982	ENSFHEG00000021894	parp4	97	61.569	Fundulus_heteroclitus
ENSIPUG00000003181	parp4	62	73.485	ENSGMOG00000001674	parp4	72	73.485	Gadus_morhua
ENSIPUG00000003181	parp4	75	47.254	ENSGALG00000034473	PARP4	85	47.377	Gallus_gallus
ENSIPUG00000003181	parp4	77	58.784	ENSGACG00000008521	parp4	82	58.784	Gasterosteus_aculeatus
ENSIPUG00000003181	parp4	73	48.074	ENSGAGG00000006063	PARP4	77	48.196	Gopherus_agassizii
ENSIPUG00000003181	parp4	73	45.615	ENSGGOG00000002940	PARP4	76	45.689	Gorilla_gorilla
ENSIPUG00000003181	parp4	66	62.321	ENSHBUG00000018539	parp4	99	69.534	Haplochromis_burtoni
ENSIPUG00000003181	parp4	78	44.956	ENSHGLG00000008309	PARP4	80	45.203	Heterocephalus_glaber_female
ENSIPUG00000003181	parp4	78	44.956	ENSHGLG00100012331	PARP4	80	45.203	Heterocephalus_glaber_male
ENSIPUG00000003181	parp4	77	58.136	ENSHCOG00000017842	parp4	81	56.750	Hippocampus_comes
ENSIPUG00000003181	parp4	62	51.996	ENSSTOG00000027869	PARP4	78	51.996	Ictidomys_tridecemlineatus
ENSIPUG00000003181	parp4	56	65.408	ENSKMAG00000018334	parp4	97	64.677	Kryptolebias_marmoratus
ENSIPUG00000003181	parp4	76	61.886	ENSLBEG00000013362	parp4	73	61.805	Labrus_bergylta
ENSIPUG00000003181	parp4	86	46.515	ENSLACG00000005075	-	79	46.515	Latimeria_chalumnae
ENSIPUG00000003181	parp4	76	56.441	ENSLOCG00000010789	parp4	81	56.361	Lepisosteus_oculatus
ENSIPUG00000003181	parp4	68	46.726	ENSLAFG00000002022	-	99	49.401	Loxodonta_africana
ENSIPUG00000003181	parp4	77	47.182	ENSMMUG00000012297	PARP4	80	47.211	Macaca_mulatta
ENSIPUG00000003181	parp4	81	45.860	ENSMNEG00000044999	PARP4	91	45.860	Macaca_nemestrina
ENSIPUG00000003181	parp4	88	47.054	ENSMLEG00000041053	PARP4	80	47.130	Mandrillus_leucophaeus
ENSIPUG00000003181	parp4	63	62.524	ENSMAMG00000020871	parp4	93	61.905	Mastacembelus_armatus
ENSIPUG00000003181	parp4	73	62.410	ENSMZEG00005014412	parp4	77	59.940	Maylandia_zebra
ENSIPUG00000003181	parp4	75	47.823	ENSMGAG00000015136	PARP4	85	47.524	Meleagris_gallopavo
ENSIPUG00000003181	parp4	68	46.645	ENSMICG00000028028	PARP4	80	46.731	Microcebus_murinus
ENSIPUG00000003181	parp4	75	45.796	ENSMOCG00000016582	Parp4	77	45.860	Microtus_ochrogaster
ENSIPUG00000003181	parp4	68	59.621	ENSMMOG00000019397	parp4	95	59.521	Mola_mola
ENSIPUG00000003181	parp4	76	46.807	ENSMODG00000007894	PARP4	73	46.704	Monodelphis_domestica
ENSIPUG00000003181	parp4	58	59.375	ENSMALG00000004027	parp4	99	59.078	Monopterus_albus
ENSIPUG00000003181	parp4	76	44.952	MGP_CAROLIEiJ_G0019339	-	69	45.141	Mus_caroli
ENSIPUG00000003181	parp4	76	45.177	ENSMUSG00000054509	Parp4	69	45.367	Mus_musculus
ENSIPUG00000003181	parp4	75	45.012	MGP_PahariEiJ_G0030357	Parp4	71	44.667	Mus_pahari
ENSIPUG00000003181	parp4	76	44.936	MGP_SPRETEiJ_G0020230	Parp4	70	45.125	Mus_spretus
ENSIPUG00000003181	parp4	64	50.592	ENSMPUG00000013318	PARP4	74	50.592	Mustela_putorius_furo
ENSIPUG00000003181	parp4	85	46.898	ENSMLUG00000003797	PARP4	86	46.964	Myotis_lucifugus
ENSIPUG00000003181	parp4	84	46.091	ENSNGAG00000018396	Parp4	75	46.135	Nannospalax_galili
ENSIPUG00000003181	parp4	51	71.186	ENSMEUG00000015644	-	78	71.186	Notamacropus_eugenii
ENSIPUG00000003181	parp4	75	61.601	ENSONIG00000010261	parp4	78	61.520	Oreochromis_niloticus
ENSIPUG00000003181	parp4	77	45.898	ENSOCUG00000014529	PARP4	76	45.942	Oryctolagus_cuniculus
ENSIPUG00000003181	parp4	54	61.357	ENSORLG00000018162	parp4	87	61.254	Oryzias_latipes
ENSIPUG00000003181	parp4	54	64.249	ENSORLG00020011392	parp4	87	63.938	Oryzias_latipes_hni
ENSIPUG00000003181	parp4	68	60.230	ENSORLG00015007534	parp4	94	60.099	Oryzias_latipes_hsok
ENSIPUG00000003181	parp4	76	56.954	ENSOMEG00000012305	parp4	94	56.954	Oryzias_melastigma
ENSIPUG00000003181	parp4	76	46.440	ENSOGAG00000016230	PARP4	81	46.564	Otolemur_garnettii
ENSIPUG00000003181	parp4	78	47.144	ENSOARG00000014415	PARP4	80	47.227	Ovis_aries
ENSIPUG00000003181	parp4	88	46.983	ENSPPAG00000024134	PARP4	79	47.059	Pan_paniscus
ENSIPUG00000003181	parp4	76	47.484	ENSPPRG00000009047	PARP4	81	47.484	Panthera_pardus
ENSIPUG00000003181	parp4	85	47.144	ENSPTRG00000005711	PARP4	79	47.220	Pan_troglodytes
ENSIPUG00000003181	parp4	88	46.822	ENSPANG00000006504	PARP4	80	46.898	Papio_anubis
ENSIPUG00000003181	parp4	63	54.717	ENSPSIG00000014196	PARP4	72	54.717	Pelodiscus_sinensis
ENSIPUG00000003181	parp4	59	69.767	ENSPMGG00000007212	parp4	88	65.789	Periophthalmus_magnuspinnatus
ENSIPUG00000003181	parp4	75	45.203	ENSPEMG00000012639	Parp4	73	45.203	Peromyscus_maniculatus_bairdii
ENSIPUG00000003181	parp4	53	40.381	ENSPMAG00000008938	-	100	40.381	Petromyzon_marinus
ENSIPUG00000003181	parp4	72	46.582	ENSPCIG00000017800	-	98	50.000	Phascolarctos_cinereus
ENSIPUG00000003181	parp4	76	59.146	ENSPFOG00000002081	parp4	93	65.201	Poecilia_formosa
ENSIPUG00000003181	parp4	58	60.123	ENSPLAG00000019059	parp4	92	60.020	Poecilia_latipinna
ENSIPUG00000003181	parp4	61	63.747	ENSPLAG00000021665	parp4	89	63.323	Poecilia_latipinna
ENSIPUG00000003181	parp4	58	60.123	ENSPMEG00000016931	-	91	60.123	Poecilia_mexicana
ENSIPUG00000003181	parp4	54	61.151	ENSPMEG00000017006	parp4	90	58.262	Poecilia_mexicana
ENSIPUG00000003181	parp4	80	45.513	ENSPCOG00000022852	PARP4	96	45.513	Propithecus_coquereli
ENSIPUG00000003181	parp4	75	46.543	ENSPVAG00000016461	PARP4	81	46.801	Pteropus_vampyrus
ENSIPUG00000003181	parp4	73	63.017	ENSPNYG00000015691	parp4	70	62.380	Pundamilia_nyererei
ENSIPUG00000003181	parp4	57	81.308	ENSPNAG00000019054	parp4	68	81.308	Pygocentrus_nattereri
ENSIPUG00000003181	parp4	77	45.843	ENSRBIG00000040334	PARP4	79	45.918	Rhinopithecus_bieti
ENSIPUG00000003181	parp4	77	45.705	ENSRROG00000040417	PARP4	79	45.617	Rhinopithecus_roxellana
ENSIPUG00000003181	parp4	64	63.710	ENSSDUG00000014635	parp4	91	63.609	Seriola_dumerili
ENSIPUG00000003181	parp4	70	61.712	ENSSLDG00000022915	parp4	75	61.396	Seriola_lalandi_dorsalis
ENSIPUG00000003181	parp4	63	68.519	ENSSPAG00000010424	parp4	91	68.519	Stegastes_partitus
ENSIPUG00000003181	parp4	77	47.727	ENSSSCG00000022957	PARP4	73	47.932	Sus_scrofa
ENSIPUG00000003181	parp4	76	57.758	ENSTNIG00000015654	parp4	99	58.819	Tetraodon_nigroviridis
ENSIPUG00000003181	parp4	62	42.630	ENSUAMG00000027134	-	92	45.527	Ursus_americanus
ENSIPUG00000003181	parp4	76	46.185	ENSUMAG00000013978	PARP4	81	46.185	Ursus_maritimus
ENSIPUG00000003181	parp4	75	47.015	ENSVVUG00000006363	PARP4	80	46.397	Vulpes_vulpes
ENSIPUG00000003181	parp4	68	46.086	ENSXETG00000002639	-	96	45.857	Xenopus_tropicalis