EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000003396 (Gene tree)
Gene ID: 108266684
Gene Symbol: wdr3
Alias: sb:cb42|wu:fb92b07
Full Name: WD repeat domain 3
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 18466 bases
Position: chr6:882191-900656
Accession: 108266684
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000004917	Utp12	PF04003.12	3.9e-20	1	1
ENSIPUP00000004942	Utp12	PF04003.12	4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000005138	-	4447	XM_017470328	ENSIPUP00000004917	941 (aa)	XP_017325817	A0A2D0R5D1
ENSIPUT00000005163	-	2802	-	ENSIPUP00000004942	933 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000003396's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000003396's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000003396	wdr3	60	30.172	ENSIPUG00000012532	wdr5	99	30.172
ENSIPUG00000003396	wdr3	50	32.026	ENSIPUG00000014671	wdr61	92	32.026

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000003396	wdr3	100	70.296	ENSG00000065183	WDR3	100	70.190	Homo_sapiens
ENSIPUG00000003396	wdr3	95	80.493	ENSAPOG00000005975	wdr3	99	79.799	Acanthochromis_polyacanthus
ENSIPUG00000003396	wdr3	100	69.767	ENSAMEG00000004339	WDR3	100	69.767	Ailuropoda_melanoleuca
ENSIPUG00000003396	wdr3	99	75.215	ENSACIG00000006993	wdr3	99	74.812	Amphilophus_citrinellus
ENSIPUG00000003396	wdr3	99	80.361	ENSAOCG00000023966	wdr3	99	80.532	Amphiprion_ocellaris
ENSIPUG00000003396	wdr3	99	81.104	ENSAPEG00000018223	wdr3	99	80.573	Amphiprion_percula
ENSIPUG00000003396	wdr3	99	81.104	ENSATEG00000000703	wdr3	99	81.316	Anabas_testudineus
ENSIPUG00000003396	wdr3	98	65.625	ENSACAG00000008210	WDR3	98	65.588	Anolis_carolinensis
ENSIPUG00000003396	wdr3	100	70.296	ENSANAG00000033348	WDR3	100	70.296	Aotus_nancymaae
ENSIPUG00000003396	wdr3	99	81.210	ENSACLG00000016975	wdr3	99	80.892	Astatotilapia_calliptera
ENSIPUG00000003396	wdr3	100	87.885	ENSAMXG00000005755	wdr3	100	87.885	Astyanax_mexicanus
ENSIPUG00000003396	wdr3	100	70.296	ENSBTAG00000019937	WDR3	100	70.296	Bos_taurus
ENSIPUG00000003396	wdr3	99	35.245	WBGene00017435	F13H8.2	97	35.064	Caenorhabditis_elegans
ENSIPUG00000003396	wdr3	100	69.873	ENSCJAG00000005749	WDR3	100	69.873	Callithrix_jacchus
ENSIPUG00000003396	wdr3	100	70.190	ENSCAFG00000009916	WDR3	100	70.190	Canis_familiaris
ENSIPUG00000003396	wdr3	87	71.151	ENSCAFG00020020610	WDR3	98	71.732	Canis_lupus_dingo
ENSIPUG00000003396	wdr3	100	70.296	ENSCHIG00000010490	WDR3	100	70.296	Capra_hircus
ENSIPUG00000003396	wdr3	100	70.464	ENSTSYG00000002158	WDR3	100	70.253	Carlito_syrichta
ENSIPUG00000003396	wdr3	100	56.283	ENSCAPG00000015805	WDR3	100	56.283	Cavia_aperea
ENSIPUG00000003396	wdr3	100	70.085	ENSCPOG00000011305	WDR3	100	70.085	Cavia_porcellus
ENSIPUG00000003396	wdr3	100	70.370	ENSCCAG00000037237	WDR3	100	70.476	Cebus_capucinus
ENSIPUG00000003396	wdr3	100	69.979	ENSCATG00000037200	WDR3	100	69.979	Cercocebus_atys
ENSIPUG00000003396	wdr3	100	70.190	ENSCLAG00000010657	WDR3	100	70.402	Chinchilla_lanigera
ENSIPUG00000003396	wdr3	100	69.873	ENSCSAG00000001705	WDR3	100	69.873	Chlorocebus_sabaeus
ENSIPUG00000003396	wdr3	84	70.000	ENSCHOG00000006428	WDR3	88	70.000	Choloepus_hoffmanni
ENSIPUG00000003396	wdr3	98	70.194	ENSCPBG00000001426	WDR3	98	69.677	Chrysemys_picta_bellii
ENSIPUG00000003396	wdr3	100	68.856	ENSCGRG00001019544	Wdr3	100	68.889	Cricetulus_griseus_chok1gshd
ENSIPUG00000003396	wdr3	87	66.829	ENSCGRG00000001027	Wdr3	91	66.883	Cricetulus_griseus_crigri
ENSIPUG00000003396	wdr3	99	79.618	ENSCSEG00000009381	wdr3	99	79.065	Cynoglossus_semilaevis
ENSIPUG00000003396	wdr3	99	77.282	ENSCVAG00000014846	wdr3	99	76.997	Cyprinodon_variegatus
ENSIPUG00000003396	wdr3	100	87.035	ENSDARG00000011079	wdr3	100	87.035	Danio_rerio
ENSIPUG00000003396	wdr3	100	69.133	ENSDNOG00000018114	WDR3	100	69.239	Dasypus_novemcinctus
ENSIPUG00000003396	wdr3	100	69.392	ENSDORG00000011031	Wdr3	100	69.497	Dipodomys_ordii
ENSIPUG00000003396	wdr3	98	42.444	FBgn0038597	CG8064	98	41.898	Drosophila_melanogaster
ENSIPUG00000003396	wdr3	100	69.767	ENSEASG00005006393	WDR3	100	69.662	Equus_asinus_asinus
ENSIPUG00000003396	wdr3	100	69.873	ENSECAG00000006575	WDR3	99	69.767	Equus_caballus
ENSIPUG00000003396	wdr3	95	70.101	ENSEEUG00000002218	WDR3	100	70.213	Erinaceus_europaeus
ENSIPUG00000003396	wdr3	100	80.170	ENSELUG00000005997	wdr3	100	80.000	Esox_lucius
ENSIPUG00000003396	wdr3	100	70.085	ENSFCAG00000003469	WDR3	100	70.085	Felis_catus
ENSIPUG00000003396	wdr3	98	67.606	ENSFALG00000005089	WDR3	98	67.422	Ficedula_albicollis
ENSIPUG00000003396	wdr3	100	70.190	ENSFDAG00000016284	WDR3	100	70.190	Fukomys_damarensis
ENSIPUG00000003396	wdr3	99	79.087	ENSFHEG00000012138	wdr3	99	76.110	Fundulus_heteroclitus
ENSIPUG00000003396	wdr3	95	71.082	ENSGMOG00000002962	wdr3	100	71.082	Gadus_morhua
ENSIPUG00000003396	wdr3	98	69.514	ENSGALG00000014791	WDR3	99	69.214	Gallus_gallus
ENSIPUG00000003396	wdr3	99	79.639	ENSGAFG00000013102	wdr3	99	79.321	Gambusia_affinis
ENSIPUG00000003396	wdr3	95	69.061	ENSGACG00000008251	wdr3	100	69.104	Gasterosteus_aculeatus
ENSIPUG00000003396	wdr3	95	69.955	ENSGAGG00000009171	WDR3	96	70.022	Gopherus_agassizii
ENSIPUG00000003396	wdr3	100	70.296	ENSGGOG00000009982	WDR3	100	70.190	Gorilla_gorilla
ENSIPUG00000003396	wdr3	99	81.316	ENSHBUG00000004367	wdr3	99	80.998	Haplochromis_burtoni
ENSIPUG00000003396	wdr3	100	69.767	ENSHGLG00000017936	WDR3	100	69.767	Heterocephalus_glaber_female
ENSIPUG00000003396	wdr3	100	69.767	ENSHGLG00100008292	WDR3	100	69.767	Heterocephalus_glaber_male
ENSIPUG00000003396	wdr3	99	71.236	ENSHCOG00000017501	wdr3	98	77.544	Hippocampus_comes
ENSIPUG00000003396	wdr3	100	69.873	ENSSTOG00000003504	WDR3	100	69.979	Ictidomys_tridecemlineatus
ENSIPUG00000003396	wdr3	100	69.166	ENSJJAG00000013861	Wdr3	100	69.336	Jaculus_jaculus
ENSIPUG00000003396	wdr3	99	79.725	ENSKMAG00000016004	wdr3	99	81.027	Kryptolebias_marmoratus
ENSIPUG00000003396	wdr3	99	77.447	ENSLBEG00000013757	wdr3	99	76.866	Labrus_bergylta
ENSIPUG00000003396	wdr3	98	66.595	ENSLACG00000014259	WDR3	99	66.667	Latimeria_chalumnae
ENSIPUG00000003396	wdr3	99	75.452	ENSLOCG00000011052	wdr3	99	75.558	Lepisosteus_oculatus
ENSIPUG00000003396	wdr3	100	69.979	ENSLAFG00000012108	WDR3	100	69.979	Loxodonta_africana
ENSIPUG00000003396	wdr3	100	69.979	ENSMFAG00000034570	WDR3	100	69.979	Macaca_fascicularis
ENSIPUG00000003396	wdr3	100	69.873	ENSMMUG00000008513	WDR3	100	69.873	Macaca_mulatta
ENSIPUG00000003396	wdr3	100	69.979	ENSMNEG00000039555	WDR3	100	69.979	Macaca_nemestrina
ENSIPUG00000003396	wdr3	100	69.873	ENSMLEG00000035516	WDR3	100	69.767	Mandrillus_leucophaeus
ENSIPUG00000003396	wdr3	99	78.112	ENSMAMG00000020737	wdr3	99	78.219	Mastacembelus_armatus
ENSIPUG00000003396	wdr3	99	77.519	ENSMZEG00005019253	wdr3	99	77.413	Maylandia_zebra
ENSIPUG00000003396	wdr3	97	65.904	ENSMGAG00000014241	WDR3	98	68.399	Meleagris_gallopavo
ENSIPUG00000003396	wdr3	100	69.280	ENSMAUG00000002574	Wdr3	100	69.280	Mesocricetus_auratus
ENSIPUG00000003396	wdr3	100	69.442	ENSMICG00000001783	WDR3	100	69.851	Microcebus_murinus
ENSIPUG00000003396	wdr3	100	69.841	ENSMOCG00000014361	Wdr3	100	69.841	Microtus_ochrogaster
ENSIPUG00000003396	wdr3	99	75.159	ENSMMOG00000019419	wdr3	99	75.159	Mola_mola
ENSIPUG00000003396	wdr3	99	69.735	ENSMODG00000005243	WDR3	99	69.735	Monodelphis_domestica
ENSIPUG00000003396	wdr3	99	73.797	ENSMALG00000016265	wdr3	99	73.690	Monopterus_albus
ENSIPUG00000003396	wdr3	100	68.677	MGP_CAROLIEiJ_G0025421	Wdr3	100	68.677	Mus_caroli
ENSIPUG00000003396	wdr3	100	68.571	ENSMUSG00000033285	Wdr3	100	68.571	Mus_musculus
ENSIPUG00000003396	wdr3	100	68.783	MGP_PahariEiJ_G0026865	Wdr3	100	68.783	Mus_pahari
ENSIPUG00000003396	wdr3	100	68.466	MGP_SPRETEiJ_G0026371	Wdr3	100	68.466	Mus_spretus
ENSIPUG00000003396	wdr3	100	70.159	ENSMPUG00000001565	WDR3	100	69.947	Mustela_putorius_furo
ENSIPUG00000003396	wdr3	100	69.873	ENSMLUG00000003500	WDR3	100	69.873	Myotis_lucifugus
ENSIPUG00000003396	wdr3	100	69.915	ENSNGAG00000021117	Wdr3	100	69.915	Nannospalax_galili
ENSIPUG00000003396	wdr3	99	73.645	ENSNBRG00000015140	wdr3	99	73.433	Neolamprologus_brichardi
ENSIPUG00000003396	wdr3	100	69.873	ENSNLEG00000005304	WDR3	100	69.767	Nomascus_leucogenys
ENSIPUG00000003396	wdr3	99	81.034	ENSMEUG00000009673	WDR3	81	81.034	Notamacropus_eugenii
ENSIPUG00000003396	wdr3	100	64.135	ENSOPRG00000001857	WDR3	94	68.590	Ochotona_princeps
ENSIPUG00000003396	wdr3	93	70.548	ENSODEG00000000136	WDR3	100	70.548	Octodon_degus
ENSIPUG00000003396	wdr3	99	81.210	ENSONIG00000015678	wdr3	99	80.679	Oreochromis_niloticus
ENSIPUG00000003396	wdr3	100	67.762	ENSOANG00000003070	WDR3	100	67.869	Ornithorhynchus_anatinus
ENSIPUG00000003396	wdr3	100	70.507	ENSOCUG00000007572	WDR3	100	70.507	Oryctolagus_cuniculus
ENSIPUG00000003396	wdr3	99	79.087	ENSORLG00020022391	wdr3	99	78.564	Oryzias_latipes_hni
ENSIPUG00000003396	wdr3	99	78.875	ENSORLG00015023208	wdr3	99	78.353	Oryzias_latipes_hsok
ENSIPUG00000003396	wdr3	99	79.299	ENSOMEG00000017592	wdr3	99	79.197	Oryzias_melastigma
ENSIPUG00000003396	wdr3	100	69.579	ENSOGAG00000007399	WDR3	100	69.873	Otolemur_garnettii
ENSIPUG00000003396	wdr3	100	70.074	ENSOARG00000020325	WDR3	100	70.074	Ovis_aries
ENSIPUG00000003396	wdr3	100	70.296	ENSPPAG00000029068	WDR3	100	70.190	Pan_paniscus
ENSIPUG00000003396	wdr3	100	69.556	ENSPPRG00000022972	WDR3	100	69.556	Panthera_pardus
ENSIPUG00000003396	wdr3	100	69.450	ENSPTIG00000016747	WDR3	100	69.450	Panthera_tigris_altaica
ENSIPUG00000003396	wdr3	100	70.296	ENSPTRG00000001168	WDR3	100	70.190	Pan_troglodytes
ENSIPUG00000003396	wdr3	100	69.979	ENSPANG00000020680	WDR3	100	69.979	Papio_anubis
ENSIPUG00000003396	wdr3	99	81.702	ENSPKIG00000024900	wdr3	99	81.596	Paramormyrops_kingsleyae
ENSIPUG00000003396	wdr3	98	69.447	ENSPSIG00000017455	WDR3	99	69.214	Pelodiscus_sinensis
ENSIPUG00000003396	wdr3	98	78.478	ENSPMGG00000022686	wdr3	99	77.609	Periophthalmus_magnuspinnatus
ENSIPUG00000003396	wdr3	100	69.280	ENSPEMG00000011928	Wdr3	100	69.174	Peromyscus_maniculatus_bairdii
ENSIPUG00000003396	wdr3	95	68.923	ENSPCIG00000000938	WDR3	99	69.317	Phascolarctos_cinereus
ENSIPUG00000003396	wdr3	99	79.427	ENSPFOG00000017900	wdr3	99	79.215	Poecilia_formosa
ENSIPUG00000003396	wdr3	99	79.639	ENSPLAG00000014362	wdr3	99	79.427	Poecilia_latipinna
ENSIPUG00000003396	wdr3	100	70.053	ENSPPYG00000000970	WDR3	100	70.053	Pongo_abelii
ENSIPUG00000003396	wdr3	92	56.632	ENSPCAG00000001265	WDR3	99	56.502	Procavia_capensis
ENSIPUG00000003396	wdr3	99	76.939	ENSPNYG00000006217	wdr3	99	76.727	Pundamilia_nyererei
ENSIPUG00000003396	wdr3	100	89.479	ENSPNAG00000006843	wdr3	100	89.479	Pygocentrus_nattereri
ENSIPUG00000003396	wdr3	100	68.148	ENSRNOG00000019670	Wdr3	100	68.148	Rattus_norvegicus
ENSIPUG00000003396	wdr3	99	69.149	ENSRBIG00000039149	WDR3	98	68.710	Rhinopithecus_bieti
ENSIPUG00000003396	wdr3	100	69.767	ENSRROG00000028066	WDR3	100	69.767	Rhinopithecus_roxellana
ENSIPUG00000003396	wdr3	99	37.128	YLR129W	DIP2	98	37.045	Saccharomyces_cerevisiae
ENSIPUG00000003396	wdr3	100	70.402	ENSSBOG00000015569	WDR3	100	70.402	Saimiri_boliviensis_boliviensis
ENSIPUG00000003396	wdr3	100	68.776	ENSSHAG00000005169	WDR3	100	68.776	Sarcophilus_harrisii
ENSIPUG00000003396	wdr3	99	80.426	ENSSFOG00015000595	wdr3	99	80.426	Scleropages_formosus
ENSIPUG00000003396	wdr3	99	80.000	ENSSMAG00000008334	wdr3	99	80.106	Scophthalmus_maximus
ENSIPUG00000003396	wdr3	99	81.635	ENSSDUG00000014276	wdr3	99	81.316	Seriola_dumerili
ENSIPUG00000003396	wdr3	99	80.234	ENSSLDG00000012837	wdr3	99	80.553	Seriola_lalandi_dorsalis
ENSIPUG00000003396	wdr3	96	65.242	ENSSARG00000002347	WDR3	100	65.129	Sorex_araneus
ENSIPUG00000003396	wdr3	98	65.326	ENSSPUG00000005582	WDR3	98	65.581	Sphenodon_punctatus
ENSIPUG00000003396	wdr3	100	69.450	ENSSSCG00000006727	WDR3	100	69.450	Sus_scrofa
ENSIPUG00000003396	wdr3	98	67.172	ENSTGUG00000013357	WDR3	98	66.990	Taeniopygia_guttata
ENSIPUG00000003396	wdr3	99	77.282	ENSTRUG00000002727	wdr3	99	77.176	Takifugu_rubripes
ENSIPUG00000003396	wdr3	99	75.586	ENSTNIG00000005299	wdr3	98	75.539	Tetraodon_nigroviridis
ENSIPUG00000003396	wdr3	84	75.000	ENSTBEG00000002549	WDR3	66	75.000	Tupaia_belangeri
ENSIPUG00000003396	wdr3	100	61.839	ENSTTRG00000003817	WDR3	94	72.022	Tursiops_truncatus
ENSIPUG00000003396	wdr3	100	67.199	ENSUAMG00000023139	WDR3	100	66.560	Ursus_americanus
ENSIPUG00000003396	wdr3	90	69.096	ENSVPAG00000000073	WDR3	89	69.096	Vicugna_pacos
ENSIPUG00000003396	wdr3	100	70.085	ENSVVUG00000010629	WDR3	100	70.085	Vulpes_vulpes
ENSIPUG00000003396	wdr3	98	69.114	ENSXETG00000009920	wdr3	98	69.247	Xenopus_tropicalis
ENSIPUG00000003396	wdr3	99	79.745	ENSXMAG00000009827	wdr3	99	79.427	Xiphophorus_maculatus