EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000003437 (Gene tree)
Gene ID: 100528538
Gene Symbol: pop5
Alias: -
Full Name: POP5 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 4722 bases
Position: chr5:2074338-2079059
Accession: 100528538
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000004946	RNase_P_Rpp14	PF01900.19	6e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000005168	-	2030	-	ENSIPUP00000004946	167 (aa)	-	E3TFH0

Gene Model

Click here to download ENSIPUG00000003437's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03008	Ribosome biogenesis in eukaryotes	KEGG
ipu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000003437's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000003437	pop5	88	51.351	ENSG00000167272	POP5	92	50.667	Homo_sapiens
ENSIPUG00000003437	pop5	89	58.784	ENSAPOG00000023686	POP5	89	58.784	Acanthochromis_polyacanthus
ENSIPUG00000003437	pop5	98	47.879	ENSAMEG00000008503	POP5	88	50.000	Ailuropoda_melanoleuca
ENSIPUG00000003437	pop5	88	68.027	ENSACIG00000018362	pop5	89	68.027	Amphilophus_citrinellus
ENSIPUG00000003437	pop5	89	61.486	ENSAOCG00000001930	pop5	89	61.074	Amphiprion_ocellaris
ENSIPUG00000003437	pop5	89	62.162	ENSAPEG00000006795	pop5	89	61.745	Amphiprion_percula
ENSIPUG00000003437	pop5	90	64.901	ENSATEG00000016792	pop5	90	64.901	Anabas_testudineus
ENSIPUG00000003437	pop5	56	54.255	ENSAPLG00000015761	POP5	87	54.255	Anas_platyrhynchos
ENSIPUG00000003437	pop5	95	45.342	ENSACAG00000003091	POP5	89	46.622	Anolis_carolinensis
ENSIPUG00000003437	pop5	85	52.113	ENSANAG00000023744	POP5	92	51.333	Aotus_nancymaae
ENSIPUG00000003437	pop5	88	67.347	ENSACLG00000021131	-	87	67.347	Astatotilapia_calliptera
ENSIPUG00000003437	pop5	90	79.333	ENSAMXG00000038175	pop5	87	79.333	Astyanax_mexicanus
ENSIPUG00000003437	pop5	99	48.503	ENSBTAG00000005385	POP5	88	50.667	Bos_taurus
ENSIPUG00000003437	pop5	88	51.351	ENSCJAG00000001309	POP5	92	50.667	Callithrix_jacchus
ENSIPUG00000003437	pop5	98	48.780	ENSCAFG00000010389	POP5	88	50.667	Canis_familiaris
ENSIPUG00000003437	pop5	98	48.780	ENSCAFG00020020663	POP5	88	50.667	Canis_lupus_dingo
ENSIPUG00000003437	pop5	99	48.503	ENSCHIG00000016402	POP5	88	50.667	Capra_hircus
ENSIPUG00000003437	pop5	85	50.704	ENSTSYG00000027616	POP5	89	50.000	Carlito_syrichta
ENSIPUG00000003437	pop5	65	47.706	ENSCAPG00000016873	POP5	76	54.651	Cavia_aperea
ENSIPUG00000003437	pop5	98	46.061	ENSCPOG00000012337	POP5	85	50.000	Cavia_porcellus
ENSIPUG00000003437	pop5	88	51.351	ENSCCAG00000023154	POP5	92	50.667	Cebus_capucinus
ENSIPUG00000003437	pop5	88	51.351	ENSCATG00000036825	POP5	92	50.667	Cercocebus_atys
ENSIPUG00000003437	pop5	100	47.305	ENSCLAG00000007808	POP5	89	50.000	Chinchilla_lanigera
ENSIPUG00000003437	pop5	88	51.351	ENSCSAG00000002246	POP5	92	50.667	Chlorocebus_sabaeus
ENSIPUG00000003437	pop5	85	42.958	ENSCHOG00000013969	POP5	86	42.857	Choloepus_hoffmanni
ENSIPUG00000003437	pop5	100	49.102	ENSCPBG00000011331	POP5	89	52.349	Chrysemys_picta_bellii
ENSIPUG00000003437	pop5	88	50.676	ENSCANG00000028001	POP5	92	50.000	Colobus_angolensis_palliatus
ENSIPUG00000003437	pop5	99	49.701	ENSCGRG00001017974	Pop5	89	52.000	Cricetulus_griseus_chok1gshd
ENSIPUG00000003437	pop5	99	49.701	ENSCGRG00000010102	Pop5	89	52.000	Cricetulus_griseus_crigri
ENSIPUG00000003437	pop5	88	61.905	ENSCSEG00000008332	-	88	61.905	Cynoglossus_semilaevis
ENSIPUG00000003437	pop5	81	61.029	ENSCSEG00000011103	pop5	91	61.029	Cynoglossus_semilaevis
ENSIPUG00000003437	pop5	99	41.916	ENSCVAG00000009152	-	87	41.830	Cyprinodon_variegatus
ENSIPUG00000003437	pop5	89	66.000	ENSDARG00000053452	pop5	89	66.000	Danio_rerio
ENSIPUG00000003437	pop5	85	50.694	ENSDNOG00000012668	-	78	50.336	Dasypus_novemcinctus
ENSIPUG00000003437	pop5	85	51.408	ENSDNOG00000045952	-	86	51.020	Dasypus_novemcinctus
ENSIPUG00000003437	pop5	85	52.113	ENSDORG00000029401	Pop5	89	51.333	Dipodomys_ordii
ENSIPUG00000003437	pop5	98	47.879	ENSETEG00000009283	POP5	89	48.667	Echinops_telfairi
ENSIPUG00000003437	pop5	98	42.683	ENSEBUG00000016369	pop5	88	44.444	Eptatretus_burgeri
ENSIPUG00000003437	pop5	98	49.390	ENSEASG00005004714	POP5	88	52.000	Equus_asinus_asinus
ENSIPUG00000003437	pop5	100	49.405	ENSECAG00000010012	POP5	88	52.000	Equus_caballus
ENSIPUG00000003437	pop5	99	62.651	ENSELUG00000023394	pop5	92	65.101	Esox_lucius
ENSIPUG00000003437	pop5	98	50.000	ENSFCAG00000042614	POP5	88	51.333	Felis_catus
ENSIPUG00000003437	pop5	88	52.381	ENSFALG00000007537	POP5	89	51.678	Ficedula_albicollis
ENSIPUG00000003437	pop5	98	47.879	ENSFDAG00000009972	POP5	89	49.333	Fukomys_damarensis
ENSIPUG00000003437	pop5	99	60.241	ENSFHEG00000022341	pop5	91	62.252	Fundulus_heteroclitus
ENSIPUG00000003437	pop5	78	61.832	ENSGMOG00000001073	pop5	99	61.832	Gadus_morhua
ENSIPUG00000003437	pop5	84	48.936	ENSGALG00000007124	POP5	50	48.936	Gallus_gallus
ENSIPUG00000003437	pop5	88	61.224	ENSGAFG00000005937	-	88	61.224	Gambusia_affinis
ENSIPUG00000003437	pop5	96	60.123	ENSGACG00000012710	-	93	61.589	Gasterosteus_aculeatus
ENSIPUG00000003437	pop5	100	49.102	ENSGAGG00000016005	POP5	89	51.678	Gopherus_agassizii
ENSIPUG00000003437	pop5	88	51.351	ENSGGOG00000013505	POP5	92	50.667	Gorilla_gorilla
ENSIPUG00000003437	pop5	88	66.667	ENSHBUG00000011718	-	88	66.667	Haplochromis_burtoni
ENSIPUG00000003437	pop5	98	47.273	ENSHGLG00000011786	POP5	89	50.336	Heterocephalus_glaber_female
ENSIPUG00000003437	pop5	98	47.273	ENSHGLG00100014284	POP5	89	50.336	Heterocephalus_glaber_male
ENSIPUG00000003437	pop5	88	60.544	ENSHCOG00000011809	pop5	90	60.544	Hippocampus_comes
ENSIPUG00000003437	pop5	99	47.590	ENSSTOG00000012577	POP5	89	50.667	Ictidomys_tridecemlineatus
ENSIPUG00000003437	pop5	85	53.521	ENSJJAG00000001080	Pop5	86	53.061	Jaculus_jaculus
ENSIPUG00000003437	pop5	90	64.901	ENSKMAG00000011158	-	89	64.901	Kryptolebias_marmoratus
ENSIPUG00000003437	pop5	99	61.212	ENSLBEG00000008652	pop5	83	63.576	Labrus_bergylta
ENSIPUG00000003437	pop5	95	46.875	ENSLACG00000018188	POP5	92	48.649	Latimeria_chalumnae
ENSIPUG00000003437	pop5	89	58.108	ENSLOCG00000002924	pop5	90	56.954	Lepisosteus_oculatus
ENSIPUG00000003437	pop5	99	47.929	ENSLAFG00000014545	POP5	89	50.658	Loxodonta_africana
ENSIPUG00000003437	pop5	88	51.351	ENSMFAG00000045933	POP5	96	50.667	Macaca_fascicularis
ENSIPUG00000003437	pop5	88	51.351	ENSMMUG00000040120	POP5	92	50.667	Macaca_mulatta
ENSIPUG00000003437	pop5	88	51.351	ENSMNEG00000041716	POP5	92	50.667	Macaca_nemestrina
ENSIPUG00000003437	pop5	88	50.676	ENSMLEG00000029377	POP5	92	50.000	Mandrillus_leucophaeus
ENSIPUG00000003437	pop5	92	63.399	ENSMAMG00000002108	pop5	90	63.576	Mastacembelus_armatus
ENSIPUG00000003437	pop5	88	67.347	ENSMZEG00005000069	-	88	67.347	Maylandia_zebra
ENSIPUG00000003437	pop5	99	49.102	ENSMAUG00000019670	Pop5	89	51.333	Mesocricetus_auratus
ENSIPUG00000003437	pop5	99	48.503	ENSMICG00000008692	POP5	88	50.667	Microcebus_murinus
ENSIPUG00000003437	pop5	99	47.590	ENSMOCG00000013322	Pop5	83	52.482	Microtus_ochrogaster
ENSIPUG00000003437	pop5	84	63.636	ENSMMOG00000010471	pop5	85	63.636	Mola_mola
ENSIPUG00000003437	pop5	99	51.205	ENSMODG00000003066	POP5	61	53.020	Monodelphis_domestica
ENSIPUG00000003437	pop5	88	63.265	ENSMALG00000017797	-	88	63.265	Monopterus_albus
ENSIPUG00000003437	pop5	100	48.810	MGP_CAROLIEiJ_G0027618	Pop5	89	50.667	Mus_caroli
ENSIPUG00000003437	pop5	100	48.810	ENSMUSG00000060152	Pop5	89	50.667	Mus_musculus
ENSIPUG00000003437	pop5	100	48.810	MGP_PahariEiJ_G0024198	Pop5	89	50.667	Mus_pahari
ENSIPUG00000003437	pop5	100	48.214	MGP_SPRETEiJ_G0028616	Pop5	89	50.000	Mus_spretus
ENSIPUG00000003437	pop5	89	50.667	ENSMPUG00000003221	POP5	89	50.667	Mustela_putorius_furo
ENSIPUG00000003437	pop5	85	51.389	ENSMLUG00000014657	POP5	91	50.658	Myotis_lucifugus
ENSIPUG00000003437	pop5	85	51.408	ENSNGAG00000002594	Pop5	88	50.667	Nannospalax_galili
ENSIPUG00000003437	pop5	67	62.500	ENSNBRG00000001020	-	83	62.500	Neolamprologus_brichardi
ENSIPUG00000003437	pop5	88	51.351	ENSNLEG00000015839	POP5	91	50.667	Nomascus_leucogenys
ENSIPUG00000003437	pop5	96	50.000	ENSMEUG00000015288	POP5	92	51.678	Notamacropus_eugenii
ENSIPUG00000003437	pop5	85	52.113	ENSOPRG00000004327	POP5	83	52.113	Ochotona_princeps
ENSIPUG00000003437	pop5	84	47.857	ENSODEG00000010351	-	88	47.857	Octodon_degus
ENSIPUG00000003437	pop5	85	51.408	ENSODEG00000006549	-	89	50.667	Octodon_degus
ENSIPUG00000003437	pop5	88	68.027	ENSONIG00000011172	pop5	88	68.027	Oreochromis_niloticus
ENSIPUG00000003437	pop5	57	54.737	ENSOANG00000001792	-	87	54.545	Ornithorhynchus_anatinus
ENSIPUG00000003437	pop5	98	48.780	ENSOCUG00000006537	POP5	88	50.667	Oryctolagus_cuniculus
ENSIPUG00000003437	pop5	87	61.379	ENSORLG00000014745	pop5	87	61.379	Oryzias_latipes
ENSIPUG00000003437	pop5	87	62.069	ENSORLG00020001168	pop5	87	62.069	Oryzias_latipes_hni
ENSIPUG00000003437	pop5	87	59.864	ENSORLG00015013535	pop5	87	59.864	Oryzias_latipes_hsok
ENSIPUG00000003437	pop5	99	58.788	ENSOMEG00000017643	pop5	90	61.589	Oryzias_melastigma
ENSIPUG00000003437	pop5	88	51.020	ENSOGAG00000008528	POP5	90	51.020	Otolemur_garnettii
ENSIPUG00000003437	pop5	99	47.929	ENSOARG00000012764	POP5	88	50.000	Ovis_aries
ENSIPUG00000003437	pop5	88	51.351	ENSPPAG00000043719	POP5	92	50.667	Pan_paniscus
ENSIPUG00000003437	pop5	98	50.000	ENSPPRG00000006474	POP5	88	51.333	Panthera_pardus
ENSIPUG00000003437	pop5	98	50.000	ENSPTIG00000012194	POP5	88	51.333	Panthera_tigris_altaica
ENSIPUG00000003437	pop5	88	51.351	ENSPTRG00000005543	POP5	92	50.667	Pan_troglodytes
ENSIPUG00000003437	pop5	88	51.351	ENSPANG00000014166	POP5	92	50.667	Papio_anubis
ENSIPUG00000003437	pop5	89	68.243	ENSPKIG00000025154	pop5	89	68.243	Paramormyrops_kingsleyae
ENSIPUG00000003437	pop5	62	54.206	ENSPSIG00000013154	POP5	77	56.842	Pelodiscus_sinensis
ENSIPUG00000003437	pop5	99	55.152	ENSPMGG00000000812	-	90	58.389	Periophthalmus_magnuspinnatus
ENSIPUG00000003437	pop5	99	49.701	ENSPEMG00000017493	Pop5	89	52.000	Peromyscus_maniculatus_bairdii
ENSIPUG00000003437	pop5	88	58.108	ENSPFOG00000013000	pop5	94	55.882	Poecilia_formosa
ENSIPUG00000003437	pop5	88	58.503	ENSPLAG00000014070	pop5	88	58.503	Poecilia_latipinna
ENSIPUG00000003437	pop5	88	59.184	ENSPMEG00000024039	pop5	88	59.184	Poecilia_mexicana
ENSIPUG00000003437	pop5	88	59.184	ENSPMEG00000012863	POP5	88	59.184	Poecilia_mexicana
ENSIPUG00000003437	pop5	88	60.544	ENSPREG00000020151	pop5	88	60.544	Poecilia_reticulata
ENSIPUG00000003437	pop5	88	52.027	ENSPPYG00000005036	POP5	78	51.333	Pongo_abelii
ENSIPUG00000003437	pop5	62	52.885	ENSPCAG00000004788	POP5	100	52.885	Procavia_capensis
ENSIPUG00000003437	pop5	99	47.904	ENSPCOG00000017618	POP5	88	50.000	Propithecus_coquereli
ENSIPUG00000003437	pop5	98	46.951	ENSPVAG00000002233	POP5	88	50.000	Pteropus_vampyrus
ENSIPUG00000003437	pop5	88	68.027	ENSPNYG00000002679	pop5	88	68.027	Pundamilia_nyererei
ENSIPUG00000003437	pop5	87	81.507	ENSPNAG00000012662	pop5	82	81.507	Pygocentrus_nattereri
ENSIPUG00000003437	pop5	94	48.734	ENSRNOG00000001199	Pop5	91	49.673	Rattus_norvegicus
ENSIPUG00000003437	pop5	85	50.704	ENSRBIG00000043505	POP5	96	50.000	Rhinopithecus_bieti
ENSIPUG00000003437	pop5	85	52.448	ENSRROG00000045063	POP5	96	50.000	Rhinopithecus_roxellana
ENSIPUG00000003437	pop5	88	51.351	ENSSBOG00000032691	POP5	100	52.206	Saimiri_boliviensis_boliviensis
ENSIPUG00000003437	pop5	90	64.667	ENSSFOG00015005630	pop5	89	64.667	Scleropages_formosus
ENSIPUG00000003437	pop5	90	62.745	ENSSMAG00000018868	pop5	91	62.745	Scophthalmus_maximus
ENSIPUG00000003437	pop5	99	61.446	ENSSDUG00000001282	-	89	64.430	Seriola_dumerili
ENSIPUG00000003437	pop5	99	62.048	ENSSLDG00000017031	pop5	89	64.430	Seriola_lalandi_dorsalis
ENSIPUG00000003437	pop5	99	62.048	ENSSLDG00000003801	-	89	64.430	Seriola_lalandi_dorsalis
ENSIPUG00000003437	pop5	62	51.923	ENSSARG00000005564	POP5	64	51.923	Sorex_araneus
ENSIPUG00000003437	pop5	89	52.703	ENSSPUG00000015531	POP5	89	52.349	Sphenodon_punctatus
ENSIPUG00000003437	pop5	88	64.626	ENSSPAG00000015306	pop5	88	64.626	Stegastes_partitus
ENSIPUG00000003437	pop5	100	49.405	ENSSSCG00000009912	POP5	88	51.333	Sus_scrofa
ENSIPUG00000003437	pop5	95	50.311	ENSTGUG00000009602	POP5	91	51.007	Taeniopygia_guttata
ENSIPUG00000003437	pop5	96	60.000	ENSTRUG00000016214	pop5	89	63.946	Takifugu_rubripes
ENSIPUG00000003437	pop5	98	55.030	ENSTNIG00000011465	pop5	85	61.268	Tetraodon_nigroviridis
ENSIPUG00000003437	pop5	85	52.817	ENSTBEG00000010131	POP5	91	51.634	Tupaia_belangeri
ENSIPUG00000003437	pop5	99	48.503	ENSTTRG00000000153	POP5	88	50.667	Tursiops_truncatus
ENSIPUG00000003437	pop5	96	47.205	ENSUAMG00000015541	POP5	69	49.324	Ursus_americanus
ENSIPUG00000003437	pop5	98	48.466	ENSUMAG00000006137	POP5	88	50.667	Ursus_maritimus
ENSIPUG00000003437	pop5	98	49.390	ENSVPAG00000010365	POP5	88	51.333	Vicugna_pacos
ENSIPUG00000003437	pop5	98	48.780	ENSVVUG00000021154	POP5	88	50.667	Vulpes_vulpes
ENSIPUG00000003437	pop5	57	55.789	ENSXETG00000031793	POP5	83	55.789	Xenopus_tropicalis
ENSIPUG00000003437	pop5	88	60.544	ENSXMAG00000003508	-	77	60.544	Xiphophorus_maculatus