EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000003494 (Gene tree)
Gene ID: 108279259
Gene Symbol: ddx1
Alias: si:ch211-214k9.2|si:dkey-161f12.1
Full Name: DEAD-box helicase 1
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 16267 bases
Position: chr2:28871785-28888051
Accession: 108279259
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000005210	DEAD	PF00270.29	2.6e-70	1	1
ENSIPUP00000005139	DEAD	PF00270.29	2.7e-70	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000005364	-	3154	XM_017493347	ENSIPUP00000005139	740 (aa)	XP_017348836	A0A2D0T216
ENSIPUT00000005440	-	2205	-	ENSIPUP00000005210	734 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000003494's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000003494's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000003494	ddx1	53	38.983	ENSIPUG00000008367	-	70	38.983
ENSIPUG00000003494	ddx1	68	40.909	ENSIPUG00000005386	ddx49	91	40.909
ENSIPUG00000003494	ddx1	55	35.443	ENSIPUG00000017350	Ddx28	64	35.443
ENSIPUG00000003494	ddx1	53	40.678	ENSIPUG00000000616	ddx6	72	40.678
ENSIPUG00000003494	ddx1	55	34.722	ENSIPUG00000014448	ddx5	68	34.722
ENSIPUG00000003494	ddx1	55	48.333	ENSIPUG00000023788	ddx47	73	48.333
ENSIPUG00000003494	ddx1	54	39.706	ENSIPUG00000012823	DDX6	71	39.706

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000003494	ddx1	100	83.108	ENSG00000079785	DDX1	100	83.108	Homo_sapiens
ENSIPUG00000003494	ddx1	100	87.162	ENSAPOG00000003166	ddx1	100	87.162	Acanthochromis_polyacanthus
ENSIPUG00000003494	ddx1	99	82.679	ENSAMEG00000001071	DDX1	99	82.679	Ailuropoda_melanoleuca
ENSIPUG00000003494	ddx1	89	85.496	ENSACIG00000017422	ddx1	99	84.885	Amphilophus_citrinellus
ENSIPUG00000003494	ddx1	91	84.673	ENSAOCG00000015436	ddx1	97	84.673	Amphiprion_ocellaris
ENSIPUG00000003494	ddx1	100	87.973	ENSAPEG00000007699	ddx1	100	87.973	Amphiprion_percula
ENSIPUG00000003494	ddx1	94	88.539	ENSATEG00000003965	ddx1	97	88.539	Anabas_testudineus
ENSIPUG00000003494	ddx1	100	83.737	ENSAPLG00000011093	DDX1	100	83.737	Anas_platyrhynchos
ENSIPUG00000003494	ddx1	94	83.811	ENSACAG00000011036	DDX1	99	83.811	Anolis_carolinensis
ENSIPUG00000003494	ddx1	100	83.378	ENSANAG00000037912	DDX1	100	83.378	Aotus_nancymaae
ENSIPUG00000003494	ddx1	99	88.060	ENSACLG00000008850	ddx1	99	87.176	Astatotilapia_calliptera
ENSIPUG00000003494	ddx1	100	92.703	ENSAMXG00000002100	ddx1	100	92.703	Astyanax_mexicanus
ENSIPUG00000003494	ddx1	100	82.838	ENSBTAG00000009906	DDX1	100	82.838	Bos_taurus
ENSIPUG00000003494	ddx1	98	46.875	WBGene00021938	Y55F3BR.1	98	46.667	Caenorhabditis_elegans
ENSIPUG00000003494	ddx1	100	83.649	ENSCJAG00000007076	DDX1	100	83.649	Callithrix_jacchus
ENSIPUG00000003494	ddx1	100	83.108	ENSCAFG00000003686	DDX1	100	83.108	Canis_familiaris
ENSIPUG00000003494	ddx1	100	83.108	ENSCAFG00020026083	DDX1	100	83.108	Canis_lupus_dingo
ENSIPUG00000003494	ddx1	100	83.108	ENSCHIG00000011046	DDX1	100	83.108	Capra_hircus
ENSIPUG00000003494	ddx1	99	59.294	ENSTSYG00000037396	-	97	61.457	Carlito_syrichta
ENSIPUG00000003494	ddx1	100	82.973	ENSTSYG00000002477	-	100	82.973	Carlito_syrichta
ENSIPUG00000003494	ddx1	86	67.190	ENSCAPG00000008906	-	93	67.190	Cavia_aperea
ENSIPUG00000003494	ddx1	88	80.551	ENSCPOG00000009816	-	96	80.551	Cavia_porcellus
ENSIPUG00000003494	ddx1	68	81.673	ENSCPOG00000032467	-	100	81.673	Cavia_porcellus
ENSIPUG00000003494	ddx1	100	83.378	ENSCCAG00000030085	DDX1	100	83.378	Cebus_capucinus
ENSIPUG00000003494	ddx1	100	82.973	ENSCATG00000033924	DDX1	100	82.973	Cercocebus_atys
ENSIPUG00000003494	ddx1	100	83.108	ENSCLAG00000005434	DDX1	100	83.108	Chinchilla_lanigera
ENSIPUG00000003494	ddx1	100	82.973	ENSCSAG00000007883	DDX1	100	82.973	Chlorocebus_sabaeus
ENSIPUG00000003494	ddx1	70	86.698	ENSCHOG00000002171	DDX1	70	86.698	Choloepus_hoffmanni
ENSIPUG00000003494	ddx1	99	78.261	ENSCPBG00000013330	DDX1	99	83.280	Chrysemys_picta_bellii
ENSIPUG00000003494	ddx1	100	64.745	ENSCING00000001176	-	100	64.973	Ciona_intestinalis
ENSIPUG00000003494	ddx1	98	60.274	ENSCSAVG00000003028	-	99	60.274	Ciona_savignyi
ENSIPUG00000003494	ddx1	100	82.973	ENSCANG00000031530	DDX1	100	82.973	Colobus_angolensis_palliatus
ENSIPUG00000003494	ddx1	100	82.973	ENSCGRG00001013025	Ddx1	100	82.973	Cricetulus_griseus_chok1gshd
ENSIPUG00000003494	ddx1	100	82.973	ENSCGRG00000000676	Ddx1	100	82.973	Cricetulus_griseus_crigri
ENSIPUG00000003494	ddx1	99	87.875	ENSCSEG00000002630	ddx1	100	87.875	Cynoglossus_semilaevis
ENSIPUG00000003494	ddx1	99	86.512	ENSCVAG00000020927	ddx1	100	86.512	Cyprinodon_variegatus
ENSIPUG00000003494	ddx1	100	89.189	ENSDARG00000032117	ddx1	100	89.237	Danio_rerio
ENSIPUG00000003494	ddx1	100	82.703	ENSDNOG00000006905	DDX1	100	82.703	Dasypus_novemcinctus
ENSIPUG00000003494	ddx1	100	83.108	ENSDORG00000012847	Ddx1	100	83.108	Dipodomys_ordii
ENSIPUG00000003494	ddx1	98	57.650	FBgn0015075	Ddx1	99	58.197	Drosophila_melanogaster
ENSIPUG00000003494	ddx1	100	75.000	ENSETEG00000014259	DDX1	100	75.000	Echinops_telfairi
ENSIPUG00000003494	ddx1	63	75.480	ENSEBUG00000009800	-	99	75.480	Eptatretus_burgeri
ENSIPUG00000003494	ddx1	100	83.243	ENSEASG00005009335	DDX1	92	83.243	Equus_asinus_asinus
ENSIPUG00000003494	ddx1	94	82.496	ENSECAG00000016396	DDX1	100	82.496	Equus_caballus
ENSIPUG00000003494	ddx1	88	80.943	ENSEEUG00000001606	DDX1	89	80.943	Erinaceus_europaeus
ENSIPUG00000003494	ddx1	100	88.394	ENSELUG00000006743	ddx1	100	88.394	Esox_lucius
ENSIPUG00000003494	ddx1	100	83.108	ENSFCAG00000004680	DDX1	100	83.108	Felis_catus
ENSIPUG00000003494	ddx1	100	84.324	ENSFALG00000008696	DDX1	100	84.324	Ficedula_albicollis
ENSIPUG00000003494	ddx1	100	82.432	ENSFDAG00000021305	DDX1	100	82.432	Fukomys_damarensis
ENSIPUG00000003494	ddx1	100	86.622	ENSFHEG00000008444	ddx1	100	86.622	Fundulus_heteroclitus
ENSIPUG00000003494	ddx1	100	85.734	ENSGMOG00000011300	ddx1	100	85.734	Gadus_morhua
ENSIPUG00000003494	ddx1	100	83.784	ENSGALG00000016461	DDX1	100	83.784	Gallus_gallus
ENSIPUG00000003494	ddx1	100	86.892	ENSGAFG00000004706	ddx1	100	86.892	Gambusia_affinis
ENSIPUG00000003494	ddx1	100	86.622	ENSGACG00000011162	ddx1	100	86.622	Gasterosteus_aculeatus
ENSIPUG00000003494	ddx1	100	84.054	ENSGAGG00000021020	DDX1	100	84.054	Gopherus_agassizii
ENSIPUG00000003494	ddx1	100	83.108	ENSGGOG00000012482	DDX1	100	83.108	Gorilla_gorilla
ENSIPUG00000003494	ddx1	100	87.703	ENSHBUG00000014069	ddx1	100	87.703	Haplochromis_burtoni
ENSIPUG00000003494	ddx1	100	82.703	ENSHGLG00000000801	DDX1	100	82.703	Heterocephalus_glaber_female
ENSIPUG00000003494	ddx1	99	82.561	ENSHGLG00100000711	DDX1	100	82.561	Heterocephalus_glaber_male
ENSIPUG00000003494	ddx1	100	87.568	ENSHCOG00000011492	ddx1	96	87.568	Hippocampus_comes
ENSIPUG00000003494	ddx1	99	82.970	ENSSTOG00000003977	DDX1	100	82.970	Ictidomys_tridecemlineatus
ENSIPUG00000003494	ddx1	89	78.321	ENSJJAG00000013315	Ddx1	100	78.321	Jaculus_jaculus
ENSIPUG00000003494	ddx1	100	88.108	ENSKMAG00000011340	ddx1	100	88.108	Kryptolebias_marmoratus
ENSIPUG00000003494	ddx1	88	82.416	ENSLBEG00000008692	ddx1	99	82.416	Labrus_bergylta
ENSIPUG00000003494	ddx1	100	83.108	ENSLACG00000010529	DDX1	100	83.108	Latimeria_chalumnae
ENSIPUG00000003494	ddx1	100	86.059	ENSLOCG00000016473	ddx1	100	86.059	Lepisosteus_oculatus
ENSIPUG00000003494	ddx1	99	83.175	ENSLAFG00000002213	DDX1	99	83.175	Loxodonta_africana
ENSIPUG00000003494	ddx1	100	82.973	ENSMFAG00000033987	DDX1	100	82.973	Macaca_fascicularis
ENSIPUG00000003494	ddx1	100	82.973	ENSMMUG00000023437	DDX1	100	82.973	Macaca_mulatta
ENSIPUG00000003494	ddx1	100	82.973	ENSMNEG00000029189	DDX1	100	82.973	Macaca_nemestrina
ENSIPUG00000003494	ddx1	100	82.973	ENSMLEG00000030787	DDX1	100	82.973	Mandrillus_leucophaeus
ENSIPUG00000003494	ddx1	100	88.243	ENSMAMG00000015916	ddx1	100	88.243	Mastacembelus_armatus
ENSIPUG00000003494	ddx1	99	87.788	ENSMZEG00005015207	ddx1	99	86.870	Maylandia_zebra
ENSIPUG00000003494	ddx1	99	79.539	ENSMGAG00000014025	DDX1	100	79.539	Meleagris_gallopavo
ENSIPUG00000003494	ddx1	64	96.364	ENSMAUG00000016156	Ddx1	100	96.364	Mesocricetus_auratus
ENSIPUG00000003494	ddx1	100	82.973	ENSMICG00000001023	DDX1	100	82.973	Microcebus_murinus
ENSIPUG00000003494	ddx1	100	83.108	ENSMOCG00000000257	Ddx1	100	83.108	Microtus_ochrogaster
ENSIPUG00000003494	ddx1	89	86.870	ENSMMOG00000015397	ddx1	99	86.870	Mola_mola
ENSIPUG00000003494	ddx1	99	84.532	ENSMODG00000010275	DDX1	99	84.532	Monodelphis_domestica
ENSIPUG00000003494	ddx1	100	88.108	ENSMALG00000016409	ddx1	100	88.108	Monopterus_albus
ENSIPUG00000003494	ddx1	100	83.108	MGP_CAROLIEiJ_G0017622	Ddx1	100	83.108	Mus_caroli
ENSIPUG00000003494	ddx1	100	82.973	ENSMUSG00000037149	Ddx1	100	82.973	Mus_musculus
ENSIPUG00000003494	ddx1	100	83.108	MGP_PahariEiJ_G0029378	Ddx1	100	83.108	Mus_pahari
ENSIPUG00000003494	ddx1	100	82.973	MGP_SPRETEiJ_G0018464	Ddx1	100	82.973	Mus_spretus
ENSIPUG00000003494	ddx1	100	82.973	ENSMPUG00000013606	DDX1	100	82.973	Mustela_putorius_furo
ENSIPUG00000003494	ddx1	99	82.473	ENSMLUG00000003027	DDX1	98	82.473	Myotis_lucifugus
ENSIPUG00000003494	ddx1	99	82.834	ENSNGAG00000015783	Ddx1	100	82.834	Nannospalax_galili
ENSIPUG00000003494	ddx1	78	84.817	ENSNBRG00000020677	ddx1	94	84.817	Neolamprologus_brichardi
ENSIPUG00000003494	ddx1	100	83.243	ENSNLEG00000014417	DDX1	100	83.243	Nomascus_leucogenys
ENSIPUG00000003494	ddx1	99	82.900	ENSMEUG00000008254	DDX1	99	82.900	Notamacropus_eugenii
ENSIPUG00000003494	ddx1	100	60.270	ENSOPRG00000004290	DDX1	100	60.270	Ochotona_princeps
ENSIPUG00000003494	ddx1	100	83.108	ENSODEG00000000569	DDX1	100	83.108	Octodon_degus
ENSIPUG00000003494	ddx1	100	88.394	ENSONIG00000000513	ddx1	100	88.394	Oreochromis_niloticus
ENSIPUG00000003494	ddx1	75	81.362	ENSOANG00000005450	DDX1	99	81.362	Ornithorhynchus_anatinus
ENSIPUG00000003494	ddx1	100	82.838	ENSOCUG00000007010	DDX1	100	82.838	Oryctolagus_cuniculus
ENSIPUG00000003494	ddx1	100	87.703	ENSORLG00000016709	ddx1	100	87.703	Oryzias_latipes
ENSIPUG00000003494	ddx1	99	87.466	ENSORLG00020003290	ddx1	100	87.466	Oryzias_latipes_hni
ENSIPUG00000003494	ddx1	100	87.297	ENSORLG00015022438	ddx1	100	87.297	Oryzias_latipes_hsok
ENSIPUG00000003494	ddx1	100	83.243	ENSOMEG00000017620	ddx1	100	81.757	Oryzias_melastigma
ENSIPUG00000003494	ddx1	99	82.745	ENSOGAG00000008730	DDX1	100	82.745	Otolemur_garnettii
ENSIPUG00000003494	ddx1	99	82.745	ENSOARG00000016369	DDX1	100	82.745	Ovis_aries
ENSIPUG00000003494	ddx1	100	82.973	ENSPPAG00000027432	DDX1	100	82.973	Pan_paniscus
ENSIPUG00000003494	ddx1	100	83.108	ENSPPRG00000020556	DDX1	100	83.108	Panthera_pardus
ENSIPUG00000003494	ddx1	100	83.108	ENSPTIG00000008267	DDX1	100	83.108	Panthera_tigris_altaica
ENSIPUG00000003494	ddx1	100	82.973	ENSPTRG00000011670	DDX1	100	82.973	Pan_troglodytes
ENSIPUG00000003494	ddx1	100	82.973	ENSPANG00000025185	DDX1	100	82.973	Papio_anubis
ENSIPUG00000003494	ddx1	100	86.622	ENSPKIG00000012466	ddx1	100	86.785	Paramormyrops_kingsleyae
ENSIPUG00000003494	ddx1	55	81.390	ENSPSIG00000012292	DDX1	100	81.390	Pelodiscus_sinensis
ENSIPUG00000003494	ddx1	100	86.486	ENSPMGG00000000782	ddx1	100	85.000	Periophthalmus_magnuspinnatus
ENSIPUG00000003494	ddx1	100	83.649	ENSPEMG00000016389	Ddx1	100	83.649	Peromyscus_maniculatus_bairdii
ENSIPUG00000003494	ddx1	99	77.174	ENSPMAG00000009118	-	100	77.174	Petromyzon_marinus
ENSIPUG00000003494	ddx1	100	85.270	ENSPCIG00000010941	DDX1	100	85.270	Phascolarctos_cinereus
ENSIPUG00000003494	ddx1	100	87.027	ENSPFOG00000011921	ddx1	100	87.027	Poecilia_formosa
ENSIPUG00000003494	ddx1	86	84.914	ENSPFOG00000006873	-	100	84.914	Poecilia_formosa
ENSIPUG00000003494	ddx1	100	86.892	ENSPLAG00000005939	ddx1	100	86.892	Poecilia_latipinna
ENSIPUG00000003494	ddx1	100	87.162	ENSPMEG00000011140	ddx1	100	87.162	Poecilia_mexicana
ENSIPUG00000003494	ddx1	100	86.757	ENSPREG00000011751	ddx1	100	86.757	Poecilia_reticulata
ENSIPUG00000003494	ddx1	100	83.108	ENSPPYG00000012638	DDX1	100	83.108	Pongo_abelii
ENSIPUG00000003494	ddx1	100	70.946	ENSPCAG00000001491	DDX1	100	70.946	Procavia_capensis
ENSIPUG00000003494	ddx1	99	81.456	ENSPCOG00000028185	DDX1	99	81.456	Propithecus_coquereli
ENSIPUG00000003494	ddx1	100	83.108	ENSPVAG00000013618	DDX1	100	83.108	Pteropus_vampyrus
ENSIPUG00000003494	ddx1	100	87.703	ENSPNYG00000013839	ddx1	100	87.703	Pundamilia_nyererei
ENSIPUG00000003494	ddx1	89	92.214	ENSPNAG00000017033	ddx1	97	92.214	Pygocentrus_nattereri
ENSIPUG00000003494	ddx1	100	83.514	ENSRNOG00000006652	Ddx1	100	83.514	Rattus_norvegicus
ENSIPUG00000003494	ddx1	100	82.027	ENSRBIG00000041664	DDX1	100	82.560	Rhinopithecus_bieti
ENSIPUG00000003494	ddx1	100	82.703	ENSRROG00000031167	DDX1	100	82.703	Rhinopithecus_roxellana
ENSIPUG00000003494	ddx1	100	83.514	ENSSBOG00000027577	DDX1	100	83.514	Saimiri_boliviensis_boliviensis
ENSIPUG00000003494	ddx1	99	77.069	ENSSHAG00000009363	DDX1	99	77.069	Sarcophilus_harrisii
ENSIPUG00000003494	ddx1	100	86.081	ENSSFOG00015014476	ddx1	100	86.081	Scleropages_formosus
ENSIPUG00000003494	ddx1	100	86.486	ENSSMAG00000010094	ddx1	100	86.486	Scophthalmus_maximus
ENSIPUG00000003494	ddx1	100	88.649	ENSSDUG00000012334	ddx1	100	88.649	Seriola_dumerili
ENSIPUG00000003494	ddx1	100	88.378	ENSSLDG00000025345	ddx1	100	88.378	Seriola_lalandi_dorsalis
ENSIPUG00000003494	ddx1	99	74.659	ENSSARG00000004536	DDX1	100	74.659	Sorex_araneus
ENSIPUG00000003494	ddx1	100	83.919	ENSSPUG00000018835	DDX1	100	83.919	Sphenodon_punctatus
ENSIPUG00000003494	ddx1	100	83.108	ENSSPAG00000023554	ddx1	100	83.108	Stegastes_partitus
ENSIPUG00000003494	ddx1	100	82.838	ENSSSCG00000008619	DDX1	100	82.838	Sus_scrofa
ENSIPUG00000003494	ddx1	100	83.514	ENSTGUG00000013096	DDX1	100	83.514	Taeniopygia_guttata
ENSIPUG00000003494	ddx1	99	87.940	ENSTRUG00000015765	ddx1	99	87.940	Takifugu_rubripes
ENSIPUG00000003494	ddx1	100	87.432	ENSTNIG00000016309	ddx1	100	87.432	Tetraodon_nigroviridis
ENSIPUG00000003494	ddx1	99	80.381	ENSTBEG00000008454	DDX1	100	80.381	Tupaia_belangeri
ENSIPUG00000003494	ddx1	100	82.838	ENSTTRG00000005081	DDX1	100	82.838	Tursiops_truncatus
ENSIPUG00000003494	ddx1	68	74.155	ENSUAMG00000017375	DDX1	92	74.155	Ursus_americanus
ENSIPUG00000003494	ddx1	99	82.970	ENSUMAG00000023450	DDX1	100	82.970	Ursus_maritimus
ENSIPUG00000003494	ddx1	85	85.748	ENSVPAG00000007764	DDX1	85	85.748	Vicugna_pacos
ENSIPUG00000003494	ddx1	99	82.857	ENSVVUG00000013085	DDX1	96	82.857	Vulpes_vulpes
ENSIPUG00000003494	ddx1	100	84.459	ENSXETG00000017825	ddx1	100	84.459	Xenopus_tropicalis
ENSIPUG00000003494	ddx1	100	84.605	ENSXCOG00000007082	ddx1	100	84.605	Xiphophorus_couchianus
ENSIPUG00000003494	ddx1	100	87.162	ENSXMAG00000004555	ddx1	100	87.162	Xiphophorus_maculatus