EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000003568 (Gene tree)
Gene ID: 108258073
Gene Symbol: TBL3
Alias: cey|zgc:101778
Full Name: transducin beta like 3
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 26358 bases
Position: chr2:11137003-11163360
Accession: 108258073
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000005258	Utp13	PF08625.11	6.3e-42	1	1
ENSIPUP00000005292	Utp13	PF08625.11	6.3e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000005491	-	5451	XM_017456365	ENSIPUP00000005258	912 (aa)	XP_017311854	W5UAR2
ENSIPUT00000005529	-	2712	-	ENSIPUP00000005292	903 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000003568's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000003568's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000003568	TBL3	63	38.650	ENSIPUG00000012532	wdr5	89	38.650
ENSIPUG00000003568	TBL3	67	30.180	ENSIPUG00000001227	POC1A	85	30.180
ENSIPUG00000003568	TBL3	51	31.731	ENSIPUG00000013084	prpf19	54	31.731
ENSIPUG00000003568	TBL3	64	33.103	ENSIPUG00000017956	PRPF4	62	33.103
ENSIPUG00000003568	TBL3	59	31.282	ENSIPUG00000014671	wdr61	95	37.255

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000003568	TBL3	87	60.500	ENSG00000183751	TBL3	97	60.500	Homo_sapiens
ENSIPUG00000003568	TBL3	96	73.785	ENSAPOG00000021308	tbl3	95	73.785	Acanthochromis_polyacanthus
ENSIPUG00000003568	TBL3	86	60.330	ENSAMEG00000017654	TBL3	97	60.253	Ailuropoda_melanoleuca
ENSIPUG00000003568	TBL3	87	77.972	ENSACIG00000007459	tbl3	99	77.972	Amphilophus_citrinellus
ENSIPUG00000003568	TBL3	96	74.350	ENSAOCG00000000453	tbl3	95	74.350	Amphiprion_ocellaris
ENSIPUG00000003568	TBL3	87	77.444	ENSAPEG00000010228	tbl3	99	77.444	Amphiprion_percula
ENSIPUG00000003568	TBL3	90	76.675	ENSATEG00000024571	tbl3	98	73.488	Anabas_testudineus
ENSIPUG00000003568	TBL3	81	60.614	ENSAPLG00000008515	TBL3	98	59.153	Anas_platyrhynchos
ENSIPUG00000003568	TBL3	87	60.875	ENSANAG00000030472	TBL3	98	60.875	Aotus_nancymaae
ENSIPUG00000003568	TBL3	94	74.653	ENSACLG00000027954	tbl3	98	73.333	Astatotilapia_calliptera
ENSIPUG00000003568	TBL3	96	82.267	ENSAMXG00000042589	tbl3	97	82.267	Astyanax_mexicanus
ENSIPUG00000003568	TBL3	87	60.576	ENSBTAG00000020366	TBL3	97	60.576	Bos_taurus
ENSIPUG00000003568	TBL3	85	31.656	WBGene00013143	Y53C12B.1	98	31.656	Caenorhabditis_elegans
ENSIPUG00000003568	TBL3	87	60.750	ENSCJAG00000015245	TBL3	97	60.750	Callithrix_jacchus
ENSIPUG00000003568	TBL3	87	59.301	ENSCAFG00000019430	TBL3	96	64.419	Canis_familiaris
ENSIPUG00000003568	TBL3	87	59.449	ENSCAFG00020026321	TBL3	98	59.449	Canis_lupus_dingo
ENSIPUG00000003568	TBL3	87	60.451	ENSCHIG00000007747	TBL3	97	60.451	Capra_hircus
ENSIPUG00000003568	TBL3	87	60.250	ENSTSYG00000036142	TBL3	98	60.300	Carlito_syrichta
ENSIPUG00000003568	TBL3	86	55.696	ENSCAPG00000016762	TBL3	95	55.696	Cavia_aperea
ENSIPUG00000003568	TBL3	87	60.276	ENSCPOG00000005998	TBL3	98	60.276	Cavia_porcellus
ENSIPUG00000003568	TBL3	87	60.875	ENSCCAG00000034486	TBL3	97	60.875	Cebus_capucinus
ENSIPUG00000003568	TBL3	87	60.150	ENSCATG00000031298	TBL3	97	60.150	Cercocebus_atys
ENSIPUG00000003568	TBL3	87	60.451	ENSCLAG00000013342	TBL3	98	60.451	Chinchilla_lanigera
ENSIPUG00000003568	TBL3	87	59.875	ENSCSAG00000011191	TBL3	97	59.875	Chlorocebus_sabaeus
ENSIPUG00000003568	TBL3	87	67.925	ENSCPBG00000000253	TBL3	97	67.925	Chrysemys_picta_bellii
ENSIPUG00000003568	TBL3	87	47.613	ENSCING00000009521	-	99	47.613	Ciona_intestinalis
ENSIPUG00000003568	TBL3	87	60.000	ENSCANG00000031169	TBL3	97	60.000	Colobus_angolensis_palliatus
ENSIPUG00000003568	TBL3	87	60.200	ENSCGRG00001021817	Tbl3	98	60.200	Cricetulus_griseus_chok1gshd
ENSIPUG00000003568	TBL3	87	60.200	ENSCGRG00000013364	Tbl3	98	60.200	Cricetulus_griseus_crigri
ENSIPUG00000003568	TBL3	97	71.145	ENSCSEG00000015634	tbl3	99	73.413	Cynoglossus_semilaevis
ENSIPUG00000003568	TBL3	96	72.830	ENSCVAG00000002720	tbl3	99	75.464	Cyprinodon_variegatus
ENSIPUG00000003568	TBL3	90	68.561	ENSDARG00000052344	tbl3	94	67.612	Danio_rerio
ENSIPUG00000003568	TBL3	78	52.883	ENSDNOG00000019996	TBL3	98	52.883	Dasypus_novemcinctus
ENSIPUG00000003568	TBL3	86	61.217	ENSDORG00000007377	Tbl3	97	61.217	Dipodomys_ordii
ENSIPUG00000003568	TBL3	86	31.941	FBgn0033454	CG1671	99	31.941	Drosophila_melanogaster
ENSIPUG00000003568	TBL3	75	63.768	ENSETEG00000019403	TBL3	85	63.768	Echinops_telfairi
ENSIPUG00000003568	TBL3	89	55.392	ENSEBUG00000003526	tbl3	93	55.392	Eptatretus_burgeri
ENSIPUG00000003568	TBL3	87	60.175	ENSEASG00005004649	TBL3	98	60.175	Equus_asinus_asinus
ENSIPUG00000003568	TBL3	87	60.125	ENSECAG00000019299	TBL3	98	60.125	Equus_caballus
ENSIPUG00000003568	TBL3	69	65.795	ENSEEUG00000000761	-	61	64.681	Erinaceus_europaeus
ENSIPUG00000003568	TBL3	87	53.943	ENSELUG00000007394	tbl3	99	53.785	Esox_lucius
ENSIPUG00000003568	TBL3	87	60.602	ENSFCAG00000011740	TBL3	98	60.602	Felis_catus
ENSIPUG00000003568	TBL3	88	64.188	ENSFALG00000003409	TBL3	99	64.118	Ficedula_albicollis
ENSIPUG00000003568	TBL3	87	59.625	ENSFDAG00000007751	TBL3	99	59.625	Fukomys_damarensis
ENSIPUG00000003568	TBL3	96	72.758	ENSFHEG00000002234	tbl3	96	72.758	Fundulus_heteroclitus
ENSIPUG00000003568	TBL3	88	61.720	ENSGMOG00000011562	tbl3	99	70.632	Gadus_morhua
ENSIPUG00000003568	TBL3	87	64.625	ENSGALG00000005558	TBL3	98	64.875	Gallus_gallus
ENSIPUG00000003568	TBL3	95	73.007	ENSGAFG00000020165	tbl3	97	72.604	Gambusia_affinis
ENSIPUG00000003568	TBL3	94	73.441	ENSGACG00000011960	tbl3	99	76.799	Gasterosteus_aculeatus
ENSIPUG00000003568	TBL3	87	67.799	ENSGAGG00000024028	TBL3	97	67.799	Gopherus_agassizii
ENSIPUG00000003568	TBL3	87	60.500	ENSGGOG00000009378	TBL3	97	60.500	Gorilla_gorilla
ENSIPUG00000003568	TBL3	94	74.653	ENSHBUG00000011872	tbl3	99	75.658	Haplochromis_burtoni
ENSIPUG00000003568	TBL3	87	59.950	ENSHGLG00000002431	TBL3	98	59.950	Heterocephalus_glaber_female
ENSIPUG00000003568	TBL3	87	59.074	ENSHGLG00100012878	TBL3	98	59.074	Heterocephalus_glaber_male
ENSIPUG00000003568	TBL3	92	73.231	ENSHCOG00000016689	tbl3	95	71.510	Hippocampus_comes
ENSIPUG00000003568	TBL3	87	60.576	ENSSTOG00000012964	TBL3	98	60.576	Ictidomys_tridecemlineatus
ENSIPUG00000003568	TBL3	87	60.375	ENSJJAG00000004124	Tbl3	98	60.375	Jaculus_jaculus
ENSIPUG00000003568	TBL3	96	73.409	ENSKMAG00000020117	tbl3	99	75.926	Kryptolebias_marmoratus
ENSIPUG00000003568	TBL3	95	73.690	ENSLBEG00000026742	tbl3	94	73.576	Labrus_bergylta
ENSIPUG00000003568	TBL3	87	67.246	ENSLACG00000000615	TBL3	99	67.246	Latimeria_chalumnae
ENSIPUG00000003568	TBL3	96	71.461	ENSLOCG00000008853	tbl3	93	72.517	Lepisosteus_oculatus
ENSIPUG00000003568	TBL3	87	58.698	ENSLAFG00000004699	TBL3	98	58.949	Loxodonta_africana
ENSIPUG00000003568	TBL3	87	60.000	ENSMFAG00000030302	TBL3	97	60.000	Macaca_fascicularis
ENSIPUG00000003568	TBL3	87	59.875	ENSMMUG00000007943	TBL3	98	59.773	Macaca_mulatta
ENSIPUG00000003568	TBL3	87	59.750	ENSMNEG00000032603	TBL3	97	59.750	Macaca_nemestrina
ENSIPUG00000003568	TBL3	86	60.025	ENSMLEG00000043359	TBL3	98	60.025	Mandrillus_leucophaeus
ENSIPUG00000003568	TBL3	90	76.435	ENSMAMG00000023507	tbl3	95	73.572	Mastacembelus_armatus
ENSIPUG00000003568	TBL3	94	74.653	ENSMZEG00005000630	tbl3	98	74.160	Maylandia_zebra
ENSIPUG00000003568	TBL3	87	65.000	ENSMGAG00000005694	TBL3	98	65.250	Meleagris_gallopavo
ENSIPUG00000003568	TBL3	87	60.200	ENSMAUG00000008718	Tbl3	98	60.200	Mesocricetus_auratus
ENSIPUG00000003568	TBL3	87	60.799	ENSMICG00000012787	TBL3	86	60.799	Microcebus_murinus
ENSIPUG00000003568	TBL3	87	60.701	ENSMOCG00000019634	Tbl3	98	60.701	Microtus_ochrogaster
ENSIPUG00000003568	TBL3	90	74.155	ENSMMOG00000007551	tbl3	99	72.587	Mola_mola
ENSIPUG00000003568	TBL3	87	62.250	ENSMODG00000016091	TBL3	98	62.250	Monodelphis_domestica
ENSIPUG00000003568	TBL3	99	71.614	ENSMALG00000007013	tbl3	94	74.830	Monopterus_albus
ENSIPUG00000003568	TBL3	87	60.625	MGP_CAROLIEiJ_G0021199	Tbl3	98	60.625	Mus_caroli
ENSIPUG00000003568	TBL3	87	60.826	ENSMUSG00000040688	Tbl3	99	66.779	Mus_musculus
ENSIPUG00000003568	TBL3	87	60.576	MGP_PahariEiJ_G0023516	Tbl3	98	60.576	Mus_pahari
ENSIPUG00000003568	TBL3	87	60.701	MGP_SPRETEiJ_G0022110	Tbl3	100	66.779	Mus_spretus
ENSIPUG00000003568	TBL3	87	59.975	ENSMPUG00000015545	TBL3	98	59.975	Mustela_putorius_furo
ENSIPUG00000003568	TBL3	87	60.401	ENSMLUG00000011684	TBL3	98	60.401	Myotis_lucifugus
ENSIPUG00000003568	TBL3	87	59.649	ENSNGAG00000002428	Tbl3	98	59.649	Nannospalax_galili
ENSIPUG00000003568	TBL3	87	74.060	ENSNBRG00000003173	tbl3	98	74.060	Neolamprologus_brichardi
ENSIPUG00000003568	TBL3	87	60.250	ENSNLEG00000008889	TBL3	97	60.250	Nomascus_leucogenys
ENSIPUG00000003568	TBL3	81	56.140	ENSMEUG00000004011	TBL3	99	56.140	Notamacropus_eugenii
ENSIPUG00000003568	TBL3	87	57.250	ENSOPRG00000002527	-	99	57.250	Ochotona_princeps
ENSIPUG00000003568	TBL3	87	59.950	ENSODEG00000013930	TBL3	98	60.076	Octodon_degus
ENSIPUG00000003568	TBL3	94	74.508	ENSONIG00000002319	tbl3	98	77.638	Oreochromis_niloticus
ENSIPUG00000003568	TBL3	86	59.476	ENSOANG00000009819	TBL3	99	59.476	Ornithorhynchus_anatinus
ENSIPUG00000003568	TBL3	97	71.064	ENSORLG00000009312	tbl3	95	76.244	Oryzias_latipes
ENSIPUG00000003568	TBL3	96	71.124	ENSORLG00020017711	tbl3	98	74.337	Oryzias_latipes_hni
ENSIPUG00000003568	TBL3	96	71.011	ENSORLG00015007004	tbl3	95	71.011	Oryzias_latipes_hsok
ENSIPUG00000003568	TBL3	95	72.634	ENSOMEG00000012684	tbl3	98	74.254	Oryzias_melastigma
ENSIPUG00000003568	TBL3	87	60.025	ENSOGAG00000010104	TBL3	98	60.025	Otolemur_garnettii
ENSIPUG00000003568	TBL3	80	55.556	ENSOARG00000017059	TBL3	98	55.556	Ovis_aries
ENSIPUG00000003568	TBL3	87	60.250	ENSPPAG00000041939	TBL3	97	60.250	Pan_paniscus
ENSIPUG00000003568	TBL3	87	60.404	ENSPPRG00000000893	TBL3	98	60.404	Panthera_pardus
ENSIPUG00000003568	TBL3	86	64.009	ENSPTIG00000010377	TBL3	98	64.009	Panthera_tigris_altaica
ENSIPUG00000003568	TBL3	87	60.375	ENSPTRG00000007621	TBL3	97	60.375	Pan_troglodytes
ENSIPUG00000003568	TBL3	87	59.875	ENSPANG00000007024	TBL3	97	59.875	Papio_anubis
ENSIPUG00000003568	TBL3	90	71.034	ENSPKIG00000000136	tbl3	95	69.116	Paramormyrops_kingsleyae
ENSIPUG00000003568	TBL3	87	65.915	ENSPSIG00000013024	TBL3	98	65.915	Pelodiscus_sinensis
ENSIPUG00000003568	TBL3	86	76.106	ENSPMGG00000020660	tbl3	96	76.106	Periophthalmus_magnuspinnatus
ENSIPUG00000003568	TBL3	86	60.714	ENSPEMG00000009768	Tbl3	98	60.714	Peromyscus_maniculatus_bairdii
ENSIPUG00000003568	TBL3	81	53.343	ENSPMAG00000004860	tbl3	95	53.760	Petromyzon_marinus
ENSIPUG00000003568	TBL3	88	61.414	ENSPCIG00000021811	TBL3	98	61.414	Phascolarctos_cinereus
ENSIPUG00000003568	TBL3	95	73.059	ENSPFOG00000009834	tbl3	95	73.288	Poecilia_formosa
ENSIPUG00000003568	TBL3	95	73.007	ENSPLAG00000016437	tbl3	96	72.717	Poecilia_latipinna
ENSIPUG00000003568	TBL3	95	73.059	ENSPMEG00000019513	tbl3	95	73.288	Poecilia_mexicana
ENSIPUG00000003568	TBL3	87	60.503	ENSPPYG00000006977	TBL3	97	60.503	Pongo_abelii
ENSIPUG00000003568	TBL3	87	60.750	ENSPCOG00000019749	TBL3	97	60.750	Propithecus_coquereli
ENSIPUG00000003568	TBL3	87	61.827	ENSPVAG00000016710	TBL3	98	61.827	Pteropus_vampyrus
ENSIPUG00000003568	TBL3	86	71.029	ENSPNYG00000017137	tbl3	98	71.029	Pundamilia_nyererei
ENSIPUG00000003568	TBL3	99	80.761	ENSPNAG00000017527	tbl3	98	84.884	Pygocentrus_nattereri
ENSIPUG00000003568	TBL3	87	60.075	ENSRNOG00000013429	Tbl3	98	60.075	Rattus_norvegicus
ENSIPUG00000003568	TBL3	87	56.070	ENSRBIG00000032982	TBL3	97	56.070	Rhinopithecus_bieti
ENSIPUG00000003568	TBL3	87	59.900	ENSRROG00000026697	TBL3	97	59.900	Rhinopithecus_roxellana
ENSIPUG00000003568	TBL3	86	31.010	YLR222C	-	99	31.001	Saccharomyces_cerevisiae
ENSIPUG00000003568	TBL3	87	60.875	ENSSBOG00000013923	TBL3	97	60.875	Saimiri_boliviensis_boliviensis
ENSIPUG00000003568	TBL3	88	61.728	ENSSHAG00000015266	TBL3	99	61.728	Sarcophilus_harrisii
ENSIPUG00000003568	TBL3	97	68.715	ENSSFOG00015023537	tbl3	94	69.353	Scleropages_formosus
ENSIPUG00000003568	TBL3	96	73.483	ENSSMAG00000014338	tbl3	99	77.136	Scophthalmus_maximus
ENSIPUG00000003568	TBL3	93	74.194	ENSSDUG00000008158	tbl3	94	73.333	Seriola_dumerili
ENSIPUG00000003568	TBL3	93	74.249	ENSSLDG00000023733	tbl3	99	75.528	Seriola_lalandi_dorsalis
ENSIPUG00000003568	TBL3	86	49.837	ENSSPUG00000012939	TBL3	99	50.163	Sphenodon_punctatus
ENSIPUG00000003568	TBL3	96	73.619	ENSSPAG00000010659	tbl3	95	73.619	Stegastes_partitus
ENSIPUG00000003568	TBL3	87	59.199	ENSSSCG00000037686	TBL3	98	59.199	Sus_scrofa
ENSIPUG00000003568	TBL3	86	62.421	ENSTGUG00000006592	-	99	62.421	Taeniopygia_guttata
ENSIPUG00000003568	TBL3	96	70.754	ENSTRUG00000007010	tbl3	96	70.866	Takifugu_rubripes
ENSIPUG00000003568	TBL3	89	73.464	ENSTNIG00000018011	tbl3	99	73.875	Tetraodon_nigroviridis
ENSIPUG00000003568	TBL3	87	58.949	ENSTTRG00000011395	TBL3	98	58.949	Tursiops_truncatus
ENSIPUG00000003568	TBL3	87	60.804	ENSUAMG00000019276	TBL3	98	60.728	Ursus_americanus
ENSIPUG00000003568	TBL3	86	58.479	ENSUMAG00000022149	TBL3	96	58.175	Ursus_maritimus
ENSIPUG00000003568	TBL3	86	60.227	ENSVVUG00000009589	TBL3	97	60.227	Vulpes_vulpes
ENSIPUG00000003568	TBL3	88	60.886	ENSXETG00000007217	tbl3	97	60.886	Xenopus_tropicalis
ENSIPUG00000003568	TBL3	88	76.339	ENSXCOG00000010277	tbl3	99	76.339	Xiphophorus_couchianus
ENSIPUG00000003568	TBL3	95	72.758	ENSXMAG00000014866	tbl3	92	76.747	Xiphophorus_maculatus