EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000003681 (Gene tree)
Gene ID: 108271659
Gene Symbol: SSB
Alias: wu:fb17f11
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 10611 bases
Position: chr11:3372954-3383564
Accession: 108271659
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000005295	RRM_1	PF00076.22	6.3e-08	1	1
ENSIPUP00000005318	RRM_1	PF00076.22	6.3e-08	1	1
ENSIPUP00000005295	RRM_3	PF08777.11	2.1e-26	1	1
ENSIPUP00000005318	RRM_3	PF08777.11	2.1e-26	1	1
ENSIPUP00000005295	La	PF05383.17	5.9e-21	1	1
ENSIPUP00000005318	La	PF05383.17	5.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000005555	-	2135	-	ENSIPUP00000005318	407 (aa)	-	W5UC88
ENSIPUT00000005533	-	2920	XM_017479375	ENSIPUP00000005295	407 (aa)	XP_017334864	W5UC88

Gene Model

Click here to download ENSIPUG00000003681's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000003681's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000003681	SSB	99	57.960	ENSG00000138385	SSB	98	65.812	Homo_sapiens
ENSIPUG00000003681	SSB	100	64.390	ENSAPOG00000003448	ssb	100	64.390	Acanthochromis_polyacanthus
ENSIPUG00000003681	SSB	99	55.769	ENSAMEG00000010507	SSB	97	55.288	Ailuropoda_melanoleuca
ENSIPUG00000003681	SSB	91	63.807	ENSACIG00000001738	ssb	84	78.261	Amphilophus_citrinellus
ENSIPUG00000003681	SSB	100	64.390	ENSAOCG00000020398	ssb	100	64.390	Amphiprion_ocellaris
ENSIPUG00000003681	SSB	100	64.634	ENSAPEG00000020395	ssb	100	64.634	Amphiprion_percula
ENSIPUG00000003681	SSB	100	66.180	ENSATEG00000016884	ssb	100	66.180	Anabas_testudineus
ENSIPUG00000003681	SSB	99	57.041	ENSAPLG00000006109	SSB	97	55.847	Anas_platyrhynchos
ENSIPUG00000003681	SSB	99	56.931	ENSACAG00000017008	SSB	97	55.637	Anolis_carolinensis
ENSIPUG00000003681	SSB	99	52.239	ENSANAG00000027195	-	97	50.864	Aotus_nancymaae
ENSIPUG00000003681	SSB	100	59.756	ENSACLG00000010798	ssb	100	60.488	Astatotilapia_calliptera
ENSIPUG00000003681	SSB	100	80.535	ENSAMXG00000012606	ssb	100	79.805	Astyanax_mexicanus
ENSIPUG00000003681	SSB	99	59.158	ENSBTAG00000008716	SSB	97	58.706	Bos_taurus
ENSIPUG00000003681	SSB	73	35.082	WBGene00016653	C44E4.4	76	36.066	Caenorhabditis_elegans
ENSIPUG00000003681	SSB	99	57.463	ENSCJAG00000045073	SSB	97	57.463	Callithrix_jacchus
ENSIPUG00000003681	SSB	99	57.921	ENSCAFG00000012418	SSB	97	57.463	Canis_familiaris
ENSIPUG00000003681	SSB	99	57.921	ENSCAFG00020002900	SSB	97	57.463	Canis_lupus_dingo
ENSIPUG00000003681	SSB	99	58.663	ENSCHIG00000022624	-	97	58.209	Capra_hircus
ENSIPUG00000003681	SSB	99	54.975	ENSCHIG00000022196	-	81	61.059	Capra_hircus
ENSIPUG00000003681	SSB	98	58.065	ENSTSYG00000000097	SSB	97	57.606	Carlito_syrichta
ENSIPUG00000003681	SSB	99	59.653	ENSCPOG00000003338	SSB	97	59.204	Cavia_porcellus
ENSIPUG00000003681	SSB	99	58.209	ENSCCAG00000035147	SSB	97	58.209	Cebus_capucinus
ENSIPUG00000003681	SSB	99	44.444	ENSCATG00000042909	-	96	44.279	Cercocebus_atys
ENSIPUG00000003681	SSB	79	51.212	ENSCATG00000036701	SSB	83	54.392	Cercocebus_atys
ENSIPUG00000003681	SSB	99	58.722	ENSCLAG00000015617	-	97	58.209	Chinchilla_lanigera
ENSIPUG00000003681	SSB	99	58.209	ENSCSAG00000015200	SSB	86	58.209	Chlorocebus_sabaeus
ENSIPUG00000003681	SSB	97	53.133	ENSCSAG00000018390	-	98	52.645	Chlorocebus_sabaeus
ENSIPUG00000003681	SSB	99	58.911	ENSCHOG00000007763	SSB	97	58.458	Choloepus_hoffmanni
ENSIPUG00000003681	SSB	100	60.922	ENSCPBG00000006519	SSB	99	61.165	Chrysemys_picta_bellii
ENSIPUG00000003681	SSB	99	58.209	ENSCANG00000027695	SSB	97	58.209	Colobus_angolensis_palliatus
ENSIPUG00000003681	SSB	99	50.495	ENSCANG00000033240	-	97	50.000	Colobus_angolensis_palliatus
ENSIPUG00000003681	SSB	93	46.875	ENSCANG00000028838	-	89	46.875	Colobus_angolensis_palliatus
ENSIPUG00000003681	SSB	100	50.351	ENSCGRG00001024831	Ssb	98	50.728	Cricetulus_griseus_chok1gshd
ENSIPUG00000003681	SSB	100	50.351	ENSCGRG00000005387	Ssb	98	50.728	Cricetulus_griseus_crigri
ENSIPUG00000003681	SSB	100	61.707	ENSCSEG00000011599	ssb	100	61.707	Cynoglossus_semilaevis
ENSIPUG00000003681	SSB	100	61.928	ENSCVAG00000021558	ssb	100	62.864	Cyprinodon_variegatus
ENSIPUG00000003681	SSB	100	77.396	ENSDARG00000029252	ssb	100	77.396	Danio_rerio
ENSIPUG00000003681	SSB	99	58.663	ENSDNOG00000013450	SSB	97	58.209	Dasypus_novemcinctus
ENSIPUG00000003681	SSB	100	52.518	ENSDORG00000005543	Ssb	98	51.816	Dipodomys_ordii
ENSIPUG00000003681	SSB	87	34.254	FBgn0011638	La	72	36.700	Drosophila_melanogaster
ENSIPUG00000003681	SSB	50	62.376	ENSETEG00000004614	-	52	62.376	Echinops_telfairi
ENSIPUG00000003681	SSB	93	46.875	ENSEBUG00000001237	ssb	95	46.875	Eptatretus_burgeri
ENSIPUG00000003681	SSB	99	58.911	ENSEASG00005022835	SSB	97	58.458	Equus_asinus_asinus
ENSIPUG00000003681	SSB	99	58.911	ENSECAG00000018495	SSB	97	58.458	Equus_caballus
ENSIPUG00000003681	SSB	73	50.000	ENSEEUG00000008077	SSB	77	49.013	Erinaceus_europaeus
ENSIPUG00000003681	SSB	100	67.647	ENSELUG00000020929	ssb	100	70.833	Esox_lucius
ENSIPUG00000003681	SSB	99	59.158	ENSFCAG00000011601	SSB	97	58.458	Felis_catus
ENSIPUG00000003681	SSB	98	59.850	ENSFALG00000000930	SSB	97	59.850	Ficedula_albicollis
ENSIPUG00000003681	SSB	99	59.406	ENSFDAG00000000598	SSB	97	58.955	Fukomys_damarensis
ENSIPUG00000003681	SSB	72	57.285	ENSFHEG00000003268	ssb	96	56.090	Fundulus_heteroclitus
ENSIPUG00000003681	SSB	99	58.637	ENSGMOG00000002664	ssb	100	58.881	Gadus_morhua
ENSIPUG00000003681	SSB	98	60.199	ENSGALG00000009677	SSB	97	59.601	Gallus_gallus
ENSIPUG00000003681	SSB	100	61.557	ENSGAFG00000002749	ssb	100	63.592	Gambusia_affinis
ENSIPUG00000003681	SSB	100	60.000	ENSGACG00000005107	ssb	100	59.472	Gasterosteus_aculeatus
ENSIPUG00000003681	SSB	100	61.408	ENSGAGG00000007807	SSB	99	61.408	Gopherus_agassizii
ENSIPUG00000003681	SSB	99	49.505	ENSGGOG00000024891	-	97	49.005	Gorilla_gorilla
ENSIPUG00000003681	SSB	56	53.304	ENSGGOG00000023471	-	91	53.304	Gorilla_gorilla
ENSIPUG00000003681	SSB	100	60.000	ENSHBUG00000006584	ssb	100	60.732	Haplochromis_burtoni
ENSIPUG00000003681	SSB	99	58.010	ENSHGLG00000017580	-	97	57.457	Heterocephalus_glaber_female
ENSIPUG00000003681	SSB	92	54.450	ENSHGLG00000005832	-	97	51.493	Heterocephalus_glaber_female
ENSIPUG00000003681	SSB	99	54.433	ENSHGLG00000004478	-	98	54.034	Heterocephalus_glaber_female
ENSIPUG00000003681	SSB	99	53.465	ENSHGLG00100008767	-	97	52.736	Heterocephalus_glaber_male
ENSIPUG00000003681	SSB	99	58.010	ENSHGLG00100003084	-	97	57.457	Heterocephalus_glaber_male
ENSIPUG00000003681	SSB	99	58.561	ENSHCOG00000019011	ssb	99	58.313	Hippocampus_comes
ENSIPUG00000003681	SSB	99	58.313	ENSSTOG00000008416	SSB	97	57.711	Ictidomys_tridecemlineatus
ENSIPUG00000003681	SSB	90	46.175	ENSJJAG00000016250	-	94	46.175	Jaculus_jaculus
ENSIPUG00000003681	SSB	100	52.093	ENSJJAG00000023158	-	99	51.748	Jaculus_jaculus
ENSIPUG00000003681	SSB	100	63.747	ENSKMAG00000017317	ssb	100	63.747	Kryptolebias_marmoratus
ENSIPUG00000003681	SSB	100	63.659	ENSLBEG00000017345	ssb	100	65.122	Labrus_bergylta
ENSIPUG00000003681	SSB	99	58.065	ENSLACG00000014056	SSB	97	58.065	Latimeria_chalumnae
ENSIPUG00000003681	SSB	99	66.832	ENSLOCG00000007933	ssb	98	66.832	Lepisosteus_oculatus
ENSIPUG00000003681	SSB	99	50.995	ENSLAFG00000028909	-	97	50.623	Loxodonta_africana
ENSIPUG00000003681	SSB	89	57.143	ENSLAFG00000000867	-	97	54.893	Loxodonta_africana
ENSIPUG00000003681	SSB	72	42.517	ENSLAFG00000026721	-	96	42.517	Loxodonta_africana
ENSIPUG00000003681	SSB	86	52.273	ENSMFAG00000041478	-	88	54.062	Macaca_fascicularis
ENSIPUG00000003681	SSB	99	58.209	ENSMFAG00000039066	SSB	97	58.209	Macaca_fascicularis
ENSIPUG00000003681	SSB	99	58.209	ENSMMUG00000023051	SSB	97	58.209	Macaca_mulatta
ENSIPUG00000003681	SSB	99	41.791	ENSMMUG00000039889	-	97	42.537	Macaca_mulatta
ENSIPUG00000003681	SSB	99	49.752	ENSMMUG00000011724	-	94	49.254	Macaca_mulatta
ENSIPUG00000003681	SSB	99	50.868	ENSMNEG00000028321	SSB	97	50.620	Macaca_nemestrina
ENSIPUG00000003681	SSB	86	52.273	ENSMNEG00000034698	-	88	54.062	Macaca_nemestrina
ENSIPUG00000003681	SSB	99	58.209	ENSMLEG00000035717	SSB	97	58.209	Mandrillus_leucophaeus
ENSIPUG00000003681	SSB	99	41.294	ENSMLEG00000042644	-	96	40.547	Mandrillus_leucophaeus
ENSIPUG00000003681	SSB	100	64.234	ENSMAMG00000004800	ssb	100	64.234	Mastacembelus_armatus
ENSIPUG00000003681	SSB	100	59.756	ENSMZEG00005005749	ssb	100	60.488	Maylandia_zebra
ENSIPUG00000003681	SSB	98	60.448	ENSMGAG00000010328	SSB	96	66.667	Meleagris_gallopavo
ENSIPUG00000003681	SSB	99	58.416	ENSMICG00000028252	-	97	57.960	Microcebus_murinus
ENSIPUG00000003681	SSB	98	52.764	ENSMICG00000033304	-	93	54.865	Microcebus_murinus
ENSIPUG00000003681	SSB	99	46.269	ENSMODG00000007027	-	97	59.494	Monodelphis_domestica
ENSIPUG00000003681	SSB	90	56.464	ENSMODG00000008227	-	97	54.126	Monodelphis_domestica
ENSIPUG00000003681	SSB	90	50.272	ENSMODG00000019271	-	97	48.130	Monodelphis_domestica
ENSIPUG00000003681	SSB	89	60.377	ENSMALG00000008045	ssb	89	63.784	Monopterus_albus
ENSIPUG00000003681	SSB	100	50.935	MGP_CAROLIEiJ_G0023629	-	96	62.500	Mus_caroli
ENSIPUG00000003681	SSB	100	50.467	ENSMUSG00000068882	Ssb	96	62.500	Mus_musculus
ENSIPUG00000003681	SSB	100	50.351	MGP_PahariEiJ_G0025081	-	96	61.842	Mus_pahari
ENSIPUG00000003681	SSB	100	50.467	MGP_SPRETEiJ_G0024551	Ssb	96	62.500	Mus_spretus
ENSIPUG00000003681	SSB	99	59.069	ENSMPUG00000000785	SSB	97	58.621	Mustela_putorius_furo
ENSIPUG00000003681	SSB	100	56.706	ENSMLUG00000016316	SSB	99	56.235	Myotis_lucifugus
ENSIPUG00000003681	SSB	100	59.756	ENSNBRG00000012661	ssb	100	60.488	Neolamprologus_brichardi
ENSIPUG00000003681	SSB	82	46.707	ENSNLEG00000028754	-	75	47.975	Nomascus_leucogenys
ENSIPUG00000003681	SSB	99	57.960	ENSNLEG00000004958	SSB	97	57.960	Nomascus_leucogenys
ENSIPUG00000003681	SSB	61	63.052	ENSMEUG00000001650	-	100	63.052	Notamacropus_eugenii
ENSIPUG00000003681	SSB	94	56.919	ENSODEG00000004202	-	99	56.136	Octodon_degus
ENSIPUG00000003681	SSB	100	60.880	ENSONIG00000008776	ssb	100	61.369	Oreochromis_niloticus
ENSIPUG00000003681	SSB	98	58.897	ENSOANG00000008543	SSB	96	58.897	Ornithorhynchus_anatinus
ENSIPUG00000003681	SSB	99	57.463	ENSOCUG00000010396	SSB	97	57.463	Oryctolagus_cuniculus
ENSIPUG00000003681	SSB	100	63.260	ENSORLG00000017208	ssb	100	63.260	Oryzias_latipes
ENSIPUG00000003681	SSB	100	62.287	ENSORLG00020022574	ssb	100	63.260	Oryzias_latipes_hni
ENSIPUG00000003681	SSB	100	62.530	ENSORLG00015016592	ssb	100	63.504	Oryzias_latipes_hsok
ENSIPUG00000003681	SSB	100	62.864	ENSOMEG00000003193	ssb	100	63.325	Oryzias_melastigma
ENSIPUG00000003681	SSB	99	54.654	ENSOGAG00000029768	SSB	97	53.461	Otolemur_garnettii
ENSIPUG00000003681	SSB	99	58.911	ENSOARG00000002906	SSB	97	58.458	Ovis_aries
ENSIPUG00000003681	SSB	99	49.257	ENSPPAG00000032427	-	93	61.667	Pan_paniscus
ENSIPUG00000003681	SSB	87	48.179	ENSPPAG00000006189	-	89	47.042	Pan_paniscus
ENSIPUG00000003681	SSB	99	57.960	ENSPPAG00000042673	SSB	97	57.960	Pan_paniscus
ENSIPUG00000003681	SSB	99	59.158	ENSPPRG00000006599	SSB	97	58.458	Panthera_pardus
ENSIPUG00000003681	SSB	99	59.158	ENSPTIG00000011021	SSB	94	58.706	Panthera_tigris_altaica
ENSIPUG00000003681	SSB	99	57.960	ENSPTRG00000012620	SSB	97	57.960	Pan_troglodytes
ENSIPUG00000003681	SSB	99	47.030	ENSPTRG00000042880	-	97	46.517	Pan_troglodytes
ENSIPUG00000003681	SSB	99	58.209	ENSPANG00000007440	SSB	97	58.209	Papio_anubis
ENSIPUG00000003681	SSB	99	42.857	ENSPANG00000034126	-	96	42.118	Papio_anubis
ENSIPUG00000003681	SSB	93	41.842	ENSPANG00000031877	-	90	40.519	Papio_anubis
ENSIPUG00000003681	SSB	100	69.193	ENSPKIG00000019325	ssb	99	69.193	Paramormyrops_kingsleyae
ENSIPUG00000003681	SSB	100	60.680	ENSPSIG00000002265	SSB	93	61.017	Pelodiscus_sinensis
ENSIPUG00000003681	SSB	86	56.091	ENSPMGG00000020075	ssb	92	56.374	Periophthalmus_magnuspinnatus
ENSIPUG00000003681	SSB	78	50.000	ENSPMAG00000002982	ssb	97	46.118	Petromyzon_marinus
ENSIPUG00000003681	SSB	94	58.974	ENSPCIG00000028591	-	96	59.432	Phascolarctos_cinereus
ENSIPUG00000003681	SSB	100	62.044	ENSPFOG00000009650	ssb	100	63.504	Poecilia_formosa
ENSIPUG00000003681	SSB	100	61.800	ENSPLAG00000020498	ssb	100	63.592	Poecilia_latipinna
ENSIPUG00000003681	SSB	100	63.504	ENSPMEG00000001051	ssb	100	63.504	Poecilia_mexicana
ENSIPUG00000003681	SSB	92	63.588	ENSPREG00000003708	ssb	99	65.172	Poecilia_reticulata
ENSIPUG00000003681	SSB	99	57.960	ENSPPYG00000012919	SSB	97	57.960	Pongo_abelii
ENSIPUG00000003681	SSB	95	56.041	ENSPCAG00000010276	SSB	99	56.041	Procavia_capensis
ENSIPUG00000003681	SSB	99	51.238	ENSPCOG00000023189	-	97	50.746	Propithecus_coquereli
ENSIPUG00000003681	SSB	99	55.693	ENSPCOG00000015741	-	97	55.224	Propithecus_coquereli
ENSIPUG00000003681	SSB	86	61.429	ENSPVAG00000006615	SSB	98	60.745	Pteropus_vampyrus
ENSIPUG00000003681	SSB	100	60.000	ENSPNYG00000006444	ssb	100	60.732	Pundamilia_nyererei
ENSIPUG00000003681	SSB	100	84.069	ENSPNAG00000011708	ssb	100	84.804	Pygocentrus_nattereri
ENSIPUG00000003681	SSB	100	51.168	ENSRNOG00000007998	Ssb	98	49.409	Rattus_norvegicus
ENSIPUG00000003681	SSB	99	51.582	ENSRNOG00000011606	AABR07061825.1	98	50.488	Rattus_norvegicus
ENSIPUG00000003681	SSB	99	42.857	ENSRBIG00000029918	-	96	42.857	Rhinopithecus_bieti
ENSIPUG00000003681	SSB	99	49.015	ENSRBIG00000041972	SSB	81	68.868	Rhinopithecus_bieti
ENSIPUG00000003681	SSB	87	52.101	ENSRBIG00000041608	-	94	51.268	Rhinopithecus_bieti
ENSIPUG00000003681	SSB	95	50.258	ENSRBIG00000041232	-	98	49.870	Rhinopithecus_bieti
ENSIPUG00000003681	SSB	99	47.537	ENSRROG00000007149	-	97	47.537	Rhinopithecus_roxellana
ENSIPUG00000003681	SSB	99	50.990	ENSRROG00000031684	-	91	59.740	Rhinopithecus_roxellana
ENSIPUG00000003681	SSB	99	58.209	ENSRROG00000040346	SSB	97	58.209	Rhinopithecus_roxellana
ENSIPUG00000003681	SSB	87	55.742	ENSRROG00000034102	-	85	55.493	Rhinopithecus_roxellana
ENSIPUG00000003681	SSB	99	57.960	ENSSBOG00000027204	SSB	97	57.960	Saimiri_boliviensis_boliviensis
ENSIPUG00000003681	SSB	99	56.897	ENSSHAG00000018062	SSB	97	57.816	Sarcophilus_harrisii
ENSIPUG00000003681	SSB	100	67.883	ENSSFOG00015000550	ssb	99	67.892	Scleropages_formosus
ENSIPUG00000003681	SSB	100	59.214	ENSSMAG00000013885	ssb	99	64.343	Scophthalmus_maximus
ENSIPUG00000003681	SSB	100	63.747	ENSSDUG00000020117	ssb	100	65.207	Seriola_dumerili
ENSIPUG00000003681	SSB	100	62.010	ENSSLDG00000002525	ssb	100	62.010	Seriola_lalandi_dorsalis
ENSIPUG00000003681	SSB	95	52.821	ENSSARG00000007747	SSB	99	52.185	Sorex_araneus
ENSIPUG00000003681	SSB	100	59.420	ENSSPUG00000012112	SSB	99	59.854	Sphenodon_punctatus
ENSIPUG00000003681	SSB	96	66.837	ENSSPAG00000005696	ssb	100	66.837	Stegastes_partitus
ENSIPUG00000003681	SSB	88	58.101	ENSSSCG00000015938	SSB	89	58.101	Sus_scrofa
ENSIPUG00000003681	SSB	92	60.582	ENSTGUG00000007942	SSB	97	59.204	Taeniopygia_guttata
ENSIPUG00000003681	SSB	100	61.125	ENSTRUG00000017839	ssb	100	61.125	Takifugu_rubripes
ENSIPUG00000003681	SSB	89	61.853	ENSTNIG00000000915	ssb	100	60.929	Tetraodon_nigroviridis
ENSIPUG00000003681	SSB	81	68.868	ENSTBEG00000009056	SSB	79	68.868	Tupaia_belangeri
ENSIPUG00000003681	SSB	99	58.911	ENSTTRG00000002152	SSB	97	58.458	Tursiops_truncatus
ENSIPUG00000003681	SSB	89	60.989	ENSUAMG00000027833	SSB	95	60.497	Ursus_americanus
ENSIPUG00000003681	SSB	99	57.673	ENSUMAG00000013907	SSB	97	57.214	Ursus_maritimus
ENSIPUG00000003681	SSB	99	58.168	ENSVPAG00000007183	SSB	97	57.711	Vicugna_pacos
ENSIPUG00000003681	SSB	99	58.416	ENSVVUG00000016573	SSB	76	56.757	Vulpes_vulpes
ENSIPUG00000003681	SSB	97	53.807	ENSXETG00000025402	ssb	92	53.807	Xenopus_tropicalis
ENSIPUG00000003681	SSB	90	61.081	ENSXCOG00000019109	ssb	93	69.841	Xiphophorus_couchianus
ENSIPUG00000003681	SSB	100	61.408	ENSXMAG00000004888	ssb	100	62.864	Xiphophorus_maculatus