EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000003783 (Gene tree)
Gene ID: -
Gene Symbol: mrps18c
Alias: si:ch211-85e10.6
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 4683 bases
Position: chr18:19463160-19467842
Accession: ZDB-GENE-060503-609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000005426	Ribosomal_S18	PF01084.20	6.8e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000005668	-	312	-	ENSIPUP00000005426	103 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000003783's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000003783's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000003783	mrps18c	88	76.923	ENSAPOG00000019045	mrps18c	71	76.923	Acanthochromis_polyacanthus
ENSIPUG00000003783	mrps18c	86	75.281	ENSACIG00000020253	mrps18c	88	75.281	Amphilophus_citrinellus
ENSIPUG00000003783	mrps18c	88	73.626	ENSAOCG00000014338	mrps18c	71	73.626	Amphiprion_ocellaris
ENSIPUG00000003783	mrps18c	84	74.713	ENSAPEG00000023068	-	83	73.864	Amphiprion_percula
ENSIPUG00000003783	mrps18c	88	73.626	ENSAPEG00000022956	mrps18c	71	73.626	Amphiprion_percula
ENSIPUG00000003783	mrps18c	88	73.626	ENSATEG00000023417	mrps18c	70	73.626	Anabas_testudineus
ENSIPUG00000003783	mrps18c	91	62.766	ENSAPLG00000012544	-	91	62.766	Anas_platyrhynchos
ENSIPUG00000003783	mrps18c	91	74.468	ENSACLG00000010521	mrps18c	89	75.824	Astatotilapia_calliptera
ENSIPUG00000003783	mrps18c	95	84.694	ENSAMXG00000012238	mrps18c	99	84.694	Astyanax_mexicanus
ENSIPUG00000003783	mrps18c	89	69.565	ENSCPBG00000007783	-	56	69.565	Chrysemys_picta_bellii
ENSIPUG00000003783	mrps18c	86	67.416	ENSCSEG00000000711	mrps18c	90	52.041	Cynoglossus_semilaevis
ENSIPUG00000003783	mrps18c	88	69.231	ENSCVAG00000020169	mrps18c	72	69.231	Cyprinodon_variegatus
ENSIPUG00000003783	mrps18c	89	80.435	ENSDARG00000069624	mrps18c	68	80.435	Danio_rerio
ENSIPUG00000003783	mrps18c	89	80.435	ENSELUG00000024603	mrps18c	69	80.435	Esox_lucius
ENSIPUG00000003783	mrps18c	100	62.385	ENSFHEG00000015550	mrps18c	81	62.385	Fundulus_heteroclitus
ENSIPUG00000003783	mrps18c	100	62.385	ENSFHEG00000018752	-	85	62.385	Fundulus_heteroclitus
ENSIPUG00000003783	mrps18c	87	64.444	ENSGALG00000023191	MRPS18C	63	64.444	Gallus_gallus
ENSIPUG00000003783	mrps18c	88	67.033	ENSGAFG00000008048	mrps18c	59	67.033	Gambusia_affinis
ENSIPUG00000003783	mrps18c	89	70.652	ENSGAGG00000015144	-	65	70.652	Gopherus_agassizii
ENSIPUG00000003783	mrps18c	88	75.824	ENSHBUG00000002008	mrps18c	70	75.824	Haplochromis_burtoni
ENSIPUG00000003783	mrps18c	88	72.527	ENSHCOG00000013161	mrps18c	69	72.527	Hippocampus_comes
ENSIPUG00000003783	mrps18c	88	71.429	ENSKMAG00000016467	mrps18c	71	71.429	Kryptolebias_marmoratus
ENSIPUG00000003783	mrps18c	88	80.220	ENSLBEG00000019174	mrps18c	70	80.220	Labrus_bergylta
ENSIPUG00000003783	mrps18c	88	80.220	ENSLBEG00000021861	mrps18c	70	80.220	Labrus_bergylta
ENSIPUG00000003783	mrps18c	87	74.444	ENSLACG00000011243	mrps18c	70	74.444	Latimeria_chalumnae
ENSIPUG00000003783	mrps18c	89	76.087	ENSLOCG00000012115	mrps18c	68	76.087	Lepisosteus_oculatus
ENSIPUG00000003783	mrps18c	88	73.626	ENSMAMG00000012386	mrps18c	68	73.626	Mastacembelus_armatus
ENSIPUG00000003783	mrps18c	88	75.824	ENSMZEG00005023278	mrps18c	70	75.824	Maylandia_zebra
ENSIPUG00000003783	mrps18c	88	75.824	ENSMMOG00000011316	mrps18c	69	75.824	Mola_mola
ENSIPUG00000003783	mrps18c	88	75.824	ENSNBRG00000006182	mrps18c	70	75.824	Neolamprologus_brichardi
ENSIPUG00000003783	mrps18c	87	70.000	ENSMEUG00000010972	-	71	70.000	Notamacropus_eugenii
ENSIPUG00000003783	mrps18c	88	76.923	ENSONIG00000012527	mrps18c	90	76.923	Oreochromis_niloticus
ENSIPUG00000003783	mrps18c	88	76.923	ENSORLG00015006869	mrps18c	71	76.923	Oryzias_latipes_hsok
ENSIPUG00000003783	mrps18c	86	77.528	ENSOMEG00000005009	mrps18c	86	77.528	Oryzias_melastigma
ENSIPUG00000003783	mrps18c	89	80.435	ENSPKIG00000021736	mrps18c	67	80.435	Paramormyrops_kingsleyae
ENSIPUG00000003783	mrps18c	94	73.196	ENSPMGG00000002991	mrps18c	98	73.196	Periophthalmus_magnuspinnatus
ENSIPUG00000003783	mrps18c	88	63.736	ENSPFOG00000002351	mrps18c	59	63.736	Poecilia_formosa
ENSIPUG00000003783	mrps18c	88	63.736	ENSPLAG00000015187	mrps18c	71	63.736	Poecilia_latipinna
ENSIPUG00000003783	mrps18c	88	63.736	ENSPMEG00000014488	mrps18c	59	63.736	Poecilia_mexicana
ENSIPUG00000003783	mrps18c	81	67.470	ENSPREG00000012593	mrps18c	85	67.470	Poecilia_reticulata
ENSIPUG00000003783	mrps18c	88	74.725	ENSPNYG00000010654	mrps18c	70	74.725	Pundamilia_nyererei
ENSIPUG00000003783	mrps18c	89	88.043	ENSPNAG00000009350	mrps18c	86	88.043	Pygocentrus_nattereri
ENSIPUG00000003783	mrps18c	89	77.174	ENSSFOG00015019444	mrps18c	68	77.174	Scleropages_formosus
ENSIPUG00000003783	mrps18c	88	76.923	ENSSDUG00000015676	mrps18c	71	76.923	Seriola_dumerili
ENSIPUG00000003783	mrps18c	88	76.923	ENSSLDG00000002034	mrps18c	71	76.923	Seriola_lalandi_dorsalis
ENSIPUG00000003783	mrps18c	85	68.182	ENSSPUG00000013990	-	64	68.182	Sphenodon_punctatus
ENSIPUG00000003783	mrps18c	87	71.111	ENSSPAG00000008687	mrps18c	70	71.111	Stegastes_partitus
ENSIPUG00000003783	mrps18c	88	71.429	ENSTRUG00000024403	mrps18c	70	71.429	Takifugu_rubripes
ENSIPUG00000003783	mrps18c	88	72.527	ENSTNIG00000005674	mrps18c	70	72.527	Tetraodon_nigroviridis
ENSIPUG00000003783	mrps18c	84	75.862	ENSXETG00000027597	mrps18c	66	75.862	Xenopus_tropicalis
ENSIPUG00000003783	mrps18c	86	67.416	ENSXCOG00000016208	mrps18c	89	67.416	Xiphophorus_couchianus
ENSIPUG00000003783	mrps18c	88	64.835	ENSXMAG00000012555	mrps18c	59	64.835	Xiphophorus_maculatus