EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000003800 (Gene tree)
Gene ID: 108278989
Gene Symbol: helq
Alias: hel308|si:ch211-85e10.2
Full Name: helicase%2C POLQ like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 18539 bases
Position: chr18:19464604-19483142
Accession: 108278989
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000005487	ResIII	PF04851.15	6.8e-08	1	1
ENSIPUP00000005487	DEAD	PF00270.29	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000005731	-	3531	XM_017492842	ENSIPUP00000005487	998 (aa)	XP_017348331	A0A2D0T0M2
ENSIPUT00000005717	-	2577	-	ENSIPUP00000005475	858 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000003800's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000003800's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000003800	helq	90	63.880	ENSG00000163312	HELQ	91	63.880	Homo_sapiens
ENSIPUG00000003800	helq	93	57.863	ENSAMEG00000004921	HELQ	99	58.065	Ailuropoda_melanoleuca
ENSIPUG00000003800	helq	91	67.615	ENSACIG00000020216	helq	97	67.615	Amphilophus_citrinellus
ENSIPUG00000003800	helq	94	64.842	ENSAOCG00000014323	helq	99	64.842	Amphiprion_ocellaris
ENSIPUG00000003800	helq	93	61.099	ENSAPEG00000023153	-	96	61.910	Amphiprion_percula
ENSIPUG00000003800	helq	94	66.844	ENSAPEG00000022964	helq	99	66.844	Amphiprion_percula
ENSIPUG00000003800	helq	99	67.488	ENSATEG00000023420	helq	99	67.488	Anabas_testudineus
ENSIPUG00000003800	helq	94	58.941	ENSAPLG00000012292	HELQ	91	62.691	Anas_platyrhynchos
ENSIPUG00000003800	helq	99	54.297	ENSACAG00000010842	HELQ	99	54.297	Anolis_carolinensis
ENSIPUG00000003800	helq	95	56.960	ENSANAG00000033513	HELQ	91	56.960	Aotus_nancymaae
ENSIPUG00000003800	helq	82	73.583	ENSACLG00000010558	helq	100	73.583	Astatotilapia_calliptera
ENSIPUG00000003800	helq	92	76.931	ENSAMXG00000012252	helq	98	76.190	Astyanax_mexicanus
ENSIPUG00000003800	helq	88	60.773	ENSBTAG00000018151	HELQ	85	60.773	Bos_taurus
ENSIPUG00000003800	helq	76	38.126	WBGene00021905	helq-1	83	38.254	Caenorhabditis_elegans
ENSIPUG00000003800	helq	95	57.157	ENSCJAG00000005247	HELQ	91	57.157	Callithrix_jacchus
ENSIPUG00000003800	helq	94	56.845	ENSCAFG00000009108	HELQ	94	56.128	Canis_familiaris
ENSIPUG00000003800	helq	93	56.985	ENSCAFG00020010495	HELQ	99	56.985	Canis_lupus_dingo
ENSIPUG00000003800	helq	94	57.357	ENSCHIG00000020128	HELQ	91	57.357	Capra_hircus
ENSIPUG00000003800	helq	91	53.361	ENSTSYG00000012900	HELQ	90	53.257	Carlito_syrichta
ENSIPUG00000003800	helq	93	58.367	ENSCPOG00000009180	HELQ	93	58.367	Cavia_porcellus
ENSIPUG00000003800	helq	93	57.990	ENSCCAG00000036773	HELQ	90	57.932	Cebus_capucinus
ENSIPUG00000003800	helq	95	56.539	ENSCATG00000034442	HELQ	91	56.539	Cercocebus_atys
ENSIPUG00000003800	helq	93	57.649	ENSCLAG00000004733	HELQ	98	55.651	Chinchilla_lanigera
ENSIPUG00000003800	helq	95	56.847	ENSCSAG00000004405	HELQ	91	56.847	Chlorocebus_sabaeus
ENSIPUG00000003800	helq	93	58.010	ENSCPBG00000007787	HELQ	98	56.215	Chrysemys_picta_bellii
ENSIPUG00000003800	helq	77	50.902	ENSCING00000006332	-	96	50.902	Ciona_intestinalis
ENSIPUG00000003800	helq	95	56.946	ENSCANG00000002407	HELQ	91	56.946	Colobus_angolensis_palliatus
ENSIPUG00000003800	helq	88	60.643	ENSCGRG00001024451	Helq	87	60.643	Cricetulus_griseus_chok1gshd
ENSIPUG00000003800	helq	93	57.402	ENSCGRG00000000309	Helq	98	57.402	Cricetulus_griseus_crigri
ENSIPUG00000003800	helq	94	64.368	ENSCVAG00000020159	helq	99	64.368	Cyprinodon_variegatus
ENSIPUG00000003800	helq	99	73.146	ENSDARG00000079818	helq	99	76.667	Danio_rerio
ENSIPUG00000003800	helq	78	42.034	FBgn0002899	mus301	77	42.034	Drosophila_melanogaster
ENSIPUG00000003800	helq	77	77.273	ENSETEG00000012220	HELQ	76	77.273	Echinops_telfairi
ENSIPUG00000003800	helq	95	56.934	ENSEASG00005013248	HELQ	94	56.934	Equus_asinus_asinus
ENSIPUG00000003800	helq	93	57.214	ENSECAG00000020717	HELQ	92	57.214	Equus_caballus
ENSIPUG00000003800	helq	98	63.297	ENSELUG00000002083	helq	99	63.297	Esox_lucius
ENSIPUG00000003800	helq	93	58.191	ENSFCAG00000009921	HELQ	98	55.891	Felis_catus
ENSIPUG00000003800	helq	91	62.084	ENSFALG00000005255	HELQ	97	62.084	Ficedula_albicollis
ENSIPUG00000003800	helq	94	58.471	ENSFDAG00000018169	HELQ	96	58.532	Fukomys_damarensis
ENSIPUG00000003800	helq	99	64.804	ENSFHEG00000015542	helq	99	65.123	Fundulus_heteroclitus
ENSIPUG00000003800	helq	82	70.267	ENSGMOG00000000020	helq	99	69.660	Gadus_morhua
ENSIPUG00000003800	helq	93	58.109	ENSGALG00000011208	HELQ	95	58.109	Gallus_gallus
ENSIPUG00000003800	helq	98	65.934	ENSGAFG00000008037	helq	98	66.036	Gambusia_affinis
ENSIPUG00000003800	helq	83	72.364	ENSGACG00000001186	helq	100	74.570	Gasterosteus_aculeatus
ENSIPUG00000003800	helq	93	58.000	ENSGAGG00000015134	HELQ	98	56.102	Gopherus_agassizii
ENSIPUG00000003800	helq	95	57.129	ENSGGOG00000008598	HELQ	91	57.228	Gorilla_gorilla
ENSIPUG00000003800	helq	99	67.703	ENSHBUG00000001997	helq	98	68.875	Haplochromis_burtoni
ENSIPUG00000003800	helq	93	57.615	ENSHGLG00000019137	HELQ	94	57.615	Heterocephalus_glaber_female
ENSIPUG00000003800	helq	93	57.615	ENSHGLG00100015489	HELQ	94	57.615	Heterocephalus_glaber_male
ENSIPUG00000003800	helq	99	66.732	ENSKMAG00000016486	helq	99	66.732	Kryptolebias_marmoratus
ENSIPUG00000003800	helq	94	66.632	ENSLBEG00000021886	helq	95	66.632	Labrus_bergylta
ENSIPUG00000003800	helq	99	58.704	ENSLACG00000010835	HELQ	99	58.229	Latimeria_chalumnae
ENSIPUG00000003800	helq	99	66.469	ENSLOCG00000012099	helq	99	66.469	Lepisosteus_oculatus
ENSIPUG00000003800	helq	99	56.053	ENSLAFG00000001056	HELQ	99	56.053	Loxodonta_africana
ENSIPUG00000003800	helq	95	56.749	ENSMFAG00000040731	HELQ	91	56.749	Macaca_fascicularis
ENSIPUG00000003800	helq	95	56.650	ENSMMUG00000015350	HELQ	91	56.650	Macaca_mulatta
ENSIPUG00000003800	helq	95	56.749	ENSMNEG00000038829	HELQ	91	56.749	Macaca_nemestrina
ENSIPUG00000003800	helq	95	53.695	ENSMLEG00000035125	HELQ	91	53.695	Mandrillus_leucophaeus
ENSIPUG00000003800	helq	98	67.465	ENSMAMG00000012364	helq	98	67.465	Mastacembelus_armatus
ENSIPUG00000003800	helq	99	68.040	ENSMZEG00005023270	helq	99	68.040	Maylandia_zebra
ENSIPUG00000003800	helq	89	61.832	ENSMGAG00000008112	HELQ	91	62.103	Meleagris_gallopavo
ENSIPUG00000003800	helq	85	60.185	ENSMAUG00000000249	Helq	97	60.185	Mesocricetus_auratus
ENSIPUG00000003800	helq	93	57.649	ENSMOCG00000014354	Helq	92	57.649	Microtus_ochrogaster
ENSIPUG00000003800	helq	92	68.063	ENSMMOG00000011313	helq	99	68.063	Mola_mola
ENSIPUG00000003800	helq	93	56.301	ENSMODG00000020774	HELQ	90	56.301	Monodelphis_domestica
ENSIPUG00000003800	helq	93	71.429	MGP_CAROLIEiJ_G0027457	Helq	98	71.429	Mus_caroli
ENSIPUG00000003800	helq	94	68.000	ENSMUSG00000035266	Helq	97	68.000	Mus_musculus
ENSIPUG00000003800	helq	88	68.919	MGP_PahariEiJ_G0017235	Helq	92	68.919	Mus_pahari
ENSIPUG00000003800	helq	94	65.333	MGP_SPRETEiJ_G0028454	Helq	98	66.216	Mus_spretus
ENSIPUG00000003800	helq	88	61.068	ENSMPUG00000014683	HELQ	93	61.068	Mustela_putorius_furo
ENSIPUG00000003800	helq	93	57.700	ENSMLUG00000017053	HELQ	93	57.700	Myotis_lucifugus
ENSIPUG00000003800	helq	95	56.931	ENSNLEG00000009088	HELQ	91	57.030	Nomascus_leucogenys
ENSIPUG00000003800	helq	83	74.427	ENSONIG00000012532	helq	99	74.427	Oreochromis_niloticus
ENSIPUG00000003800	helq	71	63.143	ENSOANG00000002113	-	99	63.143	Ornithorhynchus_anatinus
ENSIPUG00000003800	helq	93	58.537	ENSOCUG00000013294	HELQ	93	58.537	Oryctolagus_cuniculus
ENSIPUG00000003800	helq	93	64.056	ENSORLG00000022717	helq	92	64.081	Oryzias_latipes
ENSIPUG00000003800	helq	98	62.234	ENSORLG00015006855	helq	98	62.274	Oryzias_latipes_hsok
ENSIPUG00000003800	helq	94	64.643	ENSOMEG00000004983	helq	94	64.643	Oryzias_melastigma
ENSIPUG00000003800	helq	93	50.250	ENSOGAG00000014188	HELQ	89	50.250	Otolemur_garnettii
ENSIPUG00000003800	helq	93	58.081	ENSOARG00000002630	HELQ	98	55.905	Ovis_aries
ENSIPUG00000003800	helq	95	57.327	ENSPPAG00000004520	HELQ	91	57.327	Pan_paniscus
ENSIPUG00000003800	helq	94	57.811	ENSPPRG00000010520	HELQ	90	58.090	Panthera_pardus
ENSIPUG00000003800	helq	94	57.711	ENSPTIG00000021394	HELQ	90	57.990	Panthera_tigris_altaica
ENSIPUG00000003800	helq	95	57.228	ENSPTRG00000016232	HELQ	91	57.228	Pan_troglodytes
ENSIPUG00000003800	helq	95	56.552	ENSPANG00000005130	HELQ	91	56.552	Papio_anubis
ENSIPUG00000003800	helq	99	63.283	ENSPKIG00000021702	helq	99	63.283	Paramormyrops_kingsleyae
ENSIPUG00000003800	helq	83	65.066	ENSPSIG00000015865	HELQ	99	57.242	Pelodiscus_sinensis
ENSIPUG00000003800	helq	93	67.595	ENSPMGG00000002986	helq	100	67.595	Periophthalmus_magnuspinnatus
ENSIPUG00000003800	helq	93	57.579	ENSPEMG00000007325	Helq	92	57.579	Peromyscus_maniculatus_bairdii
ENSIPUG00000003800	helq	80	59.634	ENSPMAG00000004427	helq	100	60.370	Petromyzon_marinus
ENSIPUG00000003800	helq	93	56.897	ENSPCIG00000019746	HELQ	97	56.869	Phascolarctos_cinereus
ENSIPUG00000003800	helq	96	65.097	ENSPFOG00000002091	helq	98	65.097	Poecilia_formosa
ENSIPUG00000003800	helq	98	65.335	ENSPLAG00000015199	helq	98	65.335	Poecilia_latipinna
ENSIPUG00000003800	helq	98	64.585	ENSPMEG00000014496	helq	98	64.585	Poecilia_mexicana
ENSIPUG00000003800	helq	98	64.881	ENSPREG00000012605	helq	98	64.881	Poecilia_reticulata
ENSIPUG00000003800	helq	93	57.619	ENSPPYG00000014897	HELQ	90	57.619	Pongo_abelii
ENSIPUG00000003800	helq	83	59.375	ENSPCAG00000004842	HELQ	75	59.375	Procavia_capensis
ENSIPUG00000003800	helq	93	52.376	ENSPVAG00000006438	HELQ	89	52.222	Pteropus_vampyrus
ENSIPUG00000003800	helq	89	66.890	ENSPNYG00000010575	helq	97	66.890	Pundamilia_nyererei
ENSIPUG00000003800	helq	94	78.452	ENSPNAG00000009397	helq	99	78.452	Pygocentrus_nattereri
ENSIPUG00000003800	helq	99	55.354	ENSRNOG00000002181	Helq	98	55.354	Rattus_norvegicus
ENSIPUG00000003800	helq	95	57.143	ENSRBIG00000041497	HELQ	91	57.143	Rhinopithecus_bieti
ENSIPUG00000003800	helq	95	57.143	ENSRROG00000045128	HELQ	91	57.143	Rhinopithecus_roxellana
ENSIPUG00000003800	helq	93	57.990	ENSSBOG00000034314	HELQ	93	57.990	Saimiri_boliviensis_boliviensis
ENSIPUG00000003800	helq	93	56.382	ENSSHAG00000006446	HELQ	99	54.571	Sarcophilus_harrisii
ENSIPUG00000003800	helq	85	69.838	ENSSFOG00015019460	helq	97	69.606	Scleropages_formosus
ENSIPUG00000003800	helq	99	66.602	ENSSDUG00000015665	helq	99	66.602	Seriola_dumerili
ENSIPUG00000003800	helq	83	63.691	ENSSARG00000013932	HELQ	91	63.691	Sorex_araneus
ENSIPUG00000003800	helq	81	66.790	ENSSPAG00000008705	helq	83	66.626	Stegastes_partitus
ENSIPUG00000003800	helq	93	57.978	ENSSSCG00000009236	HELQ	98	57.303	Sus_scrofa
ENSIPUG00000003800	helq	93	57.889	ENSTGUG00000002154	HELQ	99	57.889	Taeniopygia_guttata
ENSIPUG00000003800	helq	99	65.846	ENSTRUG00000018644	helq	99	65.846	Takifugu_rubripes
ENSIPUG00000003800	helq	83	73.501	ENSTNIG00000005673	helq	99	73.501	Tetraodon_nigroviridis
ENSIPUG00000003800	helq	94	57.994	ENSTTRG00000004895	HELQ	91	57.994	Tursiops_truncatus
ENSIPUG00000003800	helq	93	57.661	ENSUAMG00000012816	HELQ	90	57.762	Ursus_americanus
ENSIPUG00000003800	helq	93	57.964	ENSUMAG00000008823	HELQ	99	55.787	Ursus_maritimus
ENSIPUG00000003800	helq	95	55.534	ENSVPAG00000011357	HELQ	91	55.534	Vicugna_pacos
ENSIPUG00000003800	helq	93	57.172	ENSVVUG00000015676	HELQ	93	57.172	Vulpes_vulpes
ENSIPUG00000003800	helq	83	63.658	ENSXETG00000001831	helq	99	63.658	Xenopus_tropicalis
ENSIPUG00000003800	helq	82	72.135	ENSXCOG00000016210	helq	100	71.894	Xiphophorus_couchianus
ENSIPUG00000003800	helq	82	72.135	ENSXMAG00000012563	helq	100	71.894	Xiphophorus_maculatus