EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000003803 (Gene tree)
Gene ID: 108271746
Gene Symbol: polr3gl
Alias: polr3gl|zgc:101891
Full Name: RNA polymerase III subunit G like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 15998 bases
Position: chr1:14119180-14135177
Accession: 108271746
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000005444	RNA_pol_3_Rpc31	PF11705.8	9.2e-37	1	1
ENSIPUP00000005464	RNA_pol_3_Rpc31	PF11705.8	9.2e-37	1	1
ENSIPUP00000005481	RNA_pol_3_Rpc31	PF11705.8	9.2e-37	1	1
ENSIPUP00000005474	RNA_pol_3_Rpc31	PF11705.8	1.1e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000005725	-	3957	XM_017479475	ENSIPUP00000005481	215 (aa)	XP_017334964	W5UJJ9
ENSIPUT00000005706	-	4088	-	ENSIPUP00000005464	215 (aa)	-	W5UJJ9
ENSIPUT00000005686	-	733	-	ENSIPUP00000005444	215 (aa)	-	W5UJJ9
ENSIPUT00000005716	-	4031	XM_017479482	ENSIPUP00000005474	196 (aa)	XP_017334971	A0A2D0RXR8

Gene Model

Click here to download ENSIPUG00000003803's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03020	RNA polymerase	KEGG
ipu04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000003803's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000003803	polr3gl	100	47.248	ENSIPUG00000013820	polr3g	100	45.946
ENSIPUG00000003803	polr3gl	94	57.692	ENSIPUG00000018691	polr3gla	100	57.014

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000003803	polr3gl	100	89.815	ENSAMXG00000001802	polr3glb	100	89.815	Astyanax_mexicanus
ENSIPUG00000003803	polr3gl	100	53.636	ENSAMXG00000031351	polr3gla	100	57.273	Astyanax_mexicanus
ENSIPUG00000003803	polr3gl	95	66.990	ENSCPBG00000007959	-	100	67.742	Chrysemys_picta_bellii
ENSIPUG00000003803	polr3gl	100	57.014	ENSDARG00000012044	polr3gla	100	59.276	Danio_rerio
ENSIPUG00000003803	polr3gl	100	78.241	ENSDARG00000013734	polr3glb	100	78.241	Danio_rerio
ENSIPUG00000003803	polr3gl	100	76.889	ENSELUG00000008311	polr3glb	100	75.111	Esox_lucius
ENSIPUG00000003803	polr3gl	100	64.977	ENSELUG00000013880	polr3gla	100	61.290	Esox_lucius
ENSIPUG00000003803	polr3gl	100	68.519	ENSLACG00000013217	-	99	67.593	Latimeria_chalumnae
ENSIPUG00000003803	polr3gl	100	74.654	ENSLOCG00000008195	polr3glb	99	72.685	Lepisosteus_oculatus
ENSIPUG00000003803	polr3gl	95	67.805	ENSPSIG00000010726	-	100	68.203	Pelodiscus_sinensis
ENSIPUG00000003803	polr3gl	100	91.371	ENSPNAG00000000732	polr3glb	100	91.371	Pygocentrus_nattereri