EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000003930 (Gene tree)
Gene ID: 108258633
Gene Symbol: -
Alias: -
Full Name: interferon-induced GTP-binding protein Mx1-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 12758 bases
Position: chr26:1095989-1108746
Accession: 108258633
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000006885	MMR_HSR1	PF01926.23	1.3e-06	1	1
ENSIPUP00000006856	MMR_HSR1	PF01926.23	1.4e-06	1	1
ENSIPUP00000006887	MMR_HSR1	PF01926.23	2.4e-06	1	1
ENSIPUP00000006589	MMR_HSR1	PF01926.23	2.4e-06	1	1
ENSIPUP00000006908	MMR_HSR1	PF01926.23	3.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000006880	-	1818	-	ENSIPUP00000006589	605 (aa)	-	-
ENSIPUT00000007186	-	1860	XM_017457394	ENSIPUP00000006885	619 (aa)	XP_017312883	-
ENSIPUT00000007209	-	1803	-	ENSIPUP00000006908	600 (aa)	-	-
ENSIPUT00000007188	-	1821	-	ENSIPUP00000006887	606 (aa)	-	-
ENSIPUT00000007156	-	1872	-	ENSIPUP00000006856	623 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000003930's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000003930's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000003930	-	100	87.942	ENSIPUG00000002022	-	100	87.942
ENSIPUG00000003930	-	67	32.783	ENSIPUG00000007113	si:dkey-32e23.4	66	31.868
ENSIPUG00000003930	-	99	84.951	ENSIPUG00000017075	-	99	84.951
ENSIPUG00000003930	-	78	31.418	ENSIPUG00000006021	dnm1l	63	32.976
ENSIPUG00000003930	-	99	69.775	ENSIPUG00000004815	-	99	69.775
ENSIPUG00000003930	-	99	85.460	ENSIPUG00000017098	-	99	85.460

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000003930	-	99	55.949	ENSAPOG00000009473	mxb	97	55.468	Acanthochromis_polyacanthus
ENSIPUG00000003930	-	99	59.872	ENSACIG00000007486	mxa	99	59.652	Amphilophus_citrinellus
ENSIPUG00000003930	-	99	56.311	ENSAOCG00000000359	mxb	92	55.821	Amphiprion_ocellaris
ENSIPUG00000003930	-	99	54.754	ENSAPEG00000001712	mxb	96	54.754	Amphiprion_percula
ENSIPUG00000003930	-	99	45.000	ENSDARG00000024789	mxc	96	45.000	Danio_rerio
ENSIPUG00000003930	-	99	46.417	ENSDARG00000014427	mxe	96	46.417	Danio_rerio
ENSIPUG00000003930	-	99	54.531	ENSFHEG00000004383	mxb	98	54.386	Fundulus_heteroclitus
ENSIPUG00000003930	-	99	43.499	ENSGALG00000016142	MX1	92	43.423	Gallus_gallus
ENSIPUG00000003930	-	99	58.710	ENSHBUG00000006779	-	99	58.871	Haplochromis_burtoni
ENSIPUG00000003930	-	97	59.150	ENSLBEG00000025587	mxa	98	59.150	Labrus_bergylta
ENSIPUG00000003930	-	99	50.162	ENSMAMG00000019747	-	96	49.761	Mastacembelus_armatus
ENSIPUG00000003930	-	99	59.223	ENSMZEG00005012013	-	99	59.223	Maylandia_zebra
ENSIPUG00000003930	-	99	44.194	ENSMGAG00000014565	-	87	43.590	Meleagris_gallopavo
ENSIPUG00000003930	-	99	56.280	ENSNBRG00000020639	-	99	56.550	Neolamprologus_brichardi
ENSIPUG00000003930	-	100	57.234	ENSPMGG00000001118	mxa	100	57.075	Periophthalmus_magnuspinnatus
ENSIPUG00000003930	-	99	56.078	ENSPREG00000019545	-	98	55.538	Poecilia_reticulata
ENSIPUG00000003930	-	99	54.984	ENSSPAG00000001106	mxb	96	54.984	Stegastes_partitus