EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000003932 (Gene tree)
Gene ID: -
Gene Symbol: zgc:110045
Alias: -
Full Name: poly(rC)-binding protein 3-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 6180 bases
Position: chr3:19999436-20005615
Accession: 108262845
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000005635	KH_1	PF00013.29	6.7e-35	1	2
ENSIPUP00000005635	KH_1	PF00013.29	6.7e-35	2	2
ENSIPUP00000005635	KH_2	PF07650.17	8.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000005892	-	1139	XM_017463198	ENSIPUP00000005635	270 (aa)	XP_017318687	-

Gene Model

Click here to download ENSIPUG00000003932's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000003932's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000003932	zgc:110045	53	30.405	ENSIPUG00000002561	igf2bp1	53	30.405
ENSIPUG00000003932	zgc:110045	63	32.584	ENSIPUG00000006070	igf2bp3	66	32.584
ENSIPUG00000003932	zgc:110045	69	40.000	ENSIPUG00000017608	hnrpkl	57	38.095
ENSIPUG00000003932	zgc:110045	78	67.619	ENSIPUG00000008212	pcbp4	75	70.548
ENSIPUG00000003932	zgc:110045	73	39.683	ENSIPUG00000008973	HNRNPK	70	35.227
ENSIPUG00000003932	zgc:110045	77	69.231	ENSIPUG00000024819	pcbp2	64	69.231
ENSIPUG00000003932	zgc:110045	57	33.548	ENSIPUG00000022106	Igf2bp2	53	33.121
ENSIPUG00000003932	zgc:110045	77	70.335	ENSIPUG00000006238	pcbp3	84	70.044

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000003932	zgc:110045	77	75.362	ENSG00000183570	PCBP3	90	82.317	Homo_sapiens
ENSIPUG00000003932	zgc:110045	97	66.540	ENSAPOG00000023735	zgc:110045	79	66.540	Acanthochromis_polyacanthus
ENSIPUG00000003932	zgc:110045	81	73.394	ENSACIG00000002577	zgc:110045	99	73.394	Amphilophus_citrinellus
ENSIPUG00000003932	zgc:110045	74	75.622	ENSAOCG00000005266	zgc:110045	94	75.622	Amphiprion_ocellaris
ENSIPUG00000003932	zgc:110045	97	66.160	ENSAPEG00000000729	zgc:110045	59	66.160	Amphiprion_percula
ENSIPUG00000003932	zgc:110045	66	83.019	ENSATEG00000011191	zgc:110045	62	83.019	Anabas_testudineus
ENSIPUG00000003932	zgc:110045	97	66.540	ENSACLG00000019285	zgc:110045	59	66.540	Astatotilapia_calliptera
ENSIPUG00000003932	zgc:110045	81	72.018	ENSBTAG00000030775	PCBP3	80	71.366	Bos_taurus
ENSIPUG00000003932	zgc:110045	81	72.018	ENSCAFG00000011907	PCBP3	78	72.018	Canis_familiaris
ENSIPUG00000003932	zgc:110045	81	68.349	ENSCHIG00000015841	PCBP3	73	68.349	Capra_hircus
ENSIPUG00000003932	zgc:110045	83	65.021	ENSTSYG00000005254	PCBP3	96	65.021	Carlito_syrichta
ENSIPUG00000003932	zgc:110045	77	52.885	ENSCAPG00000006767	PCBP3	65	52.885	Cavia_aperea
ENSIPUG00000003932	zgc:110045	77	75.362	ENSCPOG00000003648	PCBP3	72	75.362	Cavia_porcellus
ENSIPUG00000003932	zgc:110045	77	75.362	ENSCCAG00000024561	PCBP3	83	82.317	Cebus_capucinus
ENSIPUG00000003932	zgc:110045	77	75.362	ENSCATG00000038419	PCBP3	83	82.317	Cercocebus_atys
ENSIPUG00000003932	zgc:110045	77	75.362	ENSCLAG00000006667	PCBP3	71	75.362	Chinchilla_lanigera
ENSIPUG00000003932	zgc:110045	77	75.362	ENSCANG00000026757	PCBP3	83	82.317	Colobus_angolensis_palliatus
ENSIPUG00000003932	zgc:110045	77	75.362	ENSCGRG00001006836	Pcbp3	71	75.362	Cricetulus_griseus_chok1gshd
ENSIPUG00000003932	zgc:110045	77	75.362	ENSCGRG00000001837	Pcbp3	71	75.362	Cricetulus_griseus_crigri
ENSIPUG00000003932	zgc:110045	98	66.038	ENSCSEG00000010020	zgc:110045	90	77.209	Cynoglossus_semilaevis
ENSIPUG00000003932	zgc:110045	77	73.684	ENSCVAG00000004726	zgc:110045	92	73.684	Cyprinodon_variegatus
ENSIPUG00000003932	zgc:110045	83	86.607	ENSDARG00000057141	zgc:110045	99	86.607	Danio_rerio
ENSIPUG00000003932	zgc:110045	81	72.018	ENSDNOG00000049518	PCBP3	74	72.018	Dasypus_novemcinctus
ENSIPUG00000003932	zgc:110045	77	68.584	ENSDORG00000003640	Pcbp3	91	68.584	Dipodomys_ordii
ENSIPUG00000003932	zgc:110045	76	71.359	ENSEBUG00000009697	zgc:110045	91	72.193	Eptatretus_burgeri
ENSIPUG00000003932	zgc:110045	76	75.980	ENSEASG00005007068	PCBP3	75	75.980	Equus_asinus_asinus
ENSIPUG00000003932	zgc:110045	76	75.980	ENSECAG00000012413	PCBP3	75	75.980	Equus_caballus
ENSIPUG00000003932	zgc:110045	97	66.038	ENSELUG00000019784	zgc:110045	59	66.038	Esox_lucius
ENSIPUG00000003932	zgc:110045	77	75.362	ENSFCAG00000014812	PCBP3	83	82.317	Felis_catus
ENSIPUG00000003932	zgc:110045	81	72.018	ENSFDAG00000009117	PCBP3	79	72.018	Fukomys_damarensis
ENSIPUG00000003932	zgc:110045	74	76.000	ENSFHEG00000018838	-	91	76.000	Fundulus_heteroclitus
ENSIPUG00000003932	zgc:110045	94	67.315	ENSGMOG00000005953	zgc:110045	76	67.315	Gadus_morhua
ENSIPUG00000003932	zgc:110045	81	77.523	ENSGAFG00000017864	zgc:110045	96	77.523	Gambusia_affinis
ENSIPUG00000003932	zgc:110045	95	66.926	ENSGACG00000003044	zgc:110045	77	66.926	Gasterosteus_aculeatus
ENSIPUG00000003932	zgc:110045	77	75.362	ENSGGOG00000003683	PCBP3	83	82.317	Gorilla_gorilla
ENSIPUG00000003932	zgc:110045	97	66.540	ENSHBUG00000012495	zgc:110045	79	66.540	Haplochromis_burtoni
ENSIPUG00000003932	zgc:110045	77	75.362	ENSHGLG00000018620	PCBP3	72	75.362	Heterocephalus_glaber_female
ENSIPUG00000003932	zgc:110045	77	75.362	ENSHGLG00100013590	PCBP3	72	75.362	Heterocephalus_glaber_male
ENSIPUG00000003932	zgc:110045	81	73.973	ENSHCOG00000000818	zgc:110045	99	73.973	Hippocampus_comes
ENSIPUG00000003932	zgc:110045	77	75.362	ENSSTOG00000007178	PCBP3	71	75.362	Ictidomys_tridecemlineatus
ENSIPUG00000003932	zgc:110045	81	72.018	ENSJJAG00000021192	Pcbp3	74	72.018	Jaculus_jaculus
ENSIPUG00000003932	zgc:110045	72	80.412	ENSKMAG00000016179	-	95	80.412	Kryptolebias_marmoratus
ENSIPUG00000003932	zgc:110045	74	78.818	ENSLBEG00000023074	zgc:110045	84	80.663	Labrus_bergylta
ENSIPUG00000003932	zgc:110045	77	72.464	ENSLAFG00000020835	PCBP3	78	72.464	Loxodonta_africana
ENSIPUG00000003932	zgc:110045	77	75.362	ENSMFAG00000034574	PCBP3	83	82.317	Macaca_fascicularis
ENSIPUG00000003932	zgc:110045	77	75.362	ENSMMUG00000003825	PCBP3	83	82.317	Macaca_mulatta
ENSIPUG00000003932	zgc:110045	77	75.362	ENSMNEG00000035551	PCBP3	83	82.317	Macaca_nemestrina
ENSIPUG00000003932	zgc:110045	77	75.362	ENSMLEG00000038785	PCBP3	83	82.317	Mandrillus_leucophaeus
ENSIPUG00000003932	zgc:110045	97	65.779	ENSMAMG00000014389	zgc:110045	81	65.779	Mastacembelus_armatus
ENSIPUG00000003932	zgc:110045	97	66.540	ENSMZEG00005011785	zgc:110045	59	66.540	Maylandia_zebra
ENSIPUG00000003932	zgc:110045	77	75.362	ENSMAUG00000007036	Pcbp3	73	75.362	Mesocricetus_auratus
ENSIPUG00000003932	zgc:110045	77	74.879	ENSMICG00000012679	PCBP3	83	81.707	Microcebus_murinus
ENSIPUG00000003932	zgc:110045	77	75.362	ENSMOCG00000016127	Pcbp3	71	75.362	Microtus_ochrogaster
ENSIPUG00000003932	zgc:110045	74	75.622	ENSMMOG00000008399	zgc:110045	95	75.622	Mola_mola
ENSIPUG00000003932	zgc:110045	74	72.000	ENSMALG00000008763	zgc:110045	96	72.000	Monopterus_albus
ENSIPUG00000003932	zgc:110045	77	75.481	MGP_CAROLIEiJ_G0015475	Pcbp3	90	75.481	Mus_caroli
ENSIPUG00000003932	zgc:110045	77	75.481	ENSMUSG00000001120	Pcbp3	90	75.481	Mus_musculus
ENSIPUG00000003932	zgc:110045	77	75.481	MGP_PahariEiJ_G0030889	Pcbp3	90	75.481	Mus_pahari
ENSIPUG00000003932	zgc:110045	77	75.481	MGP_SPRETEiJ_G0016288	Pcbp3	90	75.481	Mus_spretus
ENSIPUG00000003932	zgc:110045	77	75.362	ENSMLUG00000003074	PCBP3	71	75.362	Myotis_lucifugus
ENSIPUG00000003932	zgc:110045	81	72.018	ENSNGAG00000005416	Pcbp3	74	72.018	Nannospalax_galili
ENSIPUG00000003932	zgc:110045	97	66.540	ENSNBRG00000017646	zgc:110045	59	66.540	Neolamprologus_brichardi
ENSIPUG00000003932	zgc:110045	77	75.362	ENSNLEG00000002639	PCBP3	83	82.317	Nomascus_leucogenys
ENSIPUG00000003932	zgc:110045	77	71.366	ENSMEUG00000012960	PCBP3	63	71.366	Notamacropus_eugenii
ENSIPUG00000003932	zgc:110045	77	71.498	ENSODEG00000012873	PCBP3	71	71.498	Octodon_degus
ENSIPUG00000003932	zgc:110045	97	66.540	ENSONIG00000010370	zgc:110045	62	66.540	Oreochromis_niloticus
ENSIPUG00000003932	zgc:110045	77	72.000	ENSOANG00000006265	PCBP3	79	72.000	Ornithorhynchus_anatinus
ENSIPUG00000003932	zgc:110045	81	76.606	ENSORLG00000014385	-	50	76.606	Oryzias_latipes
ENSIPUG00000003932	zgc:110045	81	76.147	ENSORLG00020003139	zgc:110045	89	73.394	Oryzias_latipes_hni
ENSIPUG00000003932	zgc:110045	81	76.606	ENSOMEG00000015459	-	50	76.606	Oryzias_melastigma
ENSIPUG00000003932	zgc:110045	81	67.890	ENSOARG00000012704	PCBP3	75	67.890	Ovis_aries
ENSIPUG00000003932	zgc:110045	77	75.362	ENSPPAG00000021940	PCBP3	83	82.317	Pan_paniscus
ENSIPUG00000003932	zgc:110045	77	75.362	ENSPPRG00000003933	PCBP3	83	82.317	Panthera_pardus
ENSIPUG00000003932	zgc:110045	77	55.072	ENSPTIG00000012038	PCBP3	82	57.609	Panthera_tigris_altaica
ENSIPUG00000003932	zgc:110045	76	46.875	ENSPTRG00000014010	PCBP3	76	46.875	Pan_troglodytes
ENSIPUG00000003932	zgc:110045	77	75.362	ENSPANG00000023631	PCBP3	83	82.317	Papio_anubis
ENSIPUG00000003932	zgc:110045	80	57.674	ENSPMGG00000022531	-	96	57.674	Periophthalmus_magnuspinnatus
ENSIPUG00000003932	zgc:110045	77	75.362	ENSPEMG00000000587	Pcbp3	71	75.362	Peromyscus_maniculatus_bairdii
ENSIPUG00000003932	zgc:110045	94	67.589	ENSPFOG00000002348	zgc:110045	76	67.589	Poecilia_formosa
ENSIPUG00000003932	zgc:110045	81	74.312	ENSPLAG00000017488	zgc:110045	95	74.312	Poecilia_latipinna
ENSIPUG00000003932	zgc:110045	81	77.523	ENSPMEG00000012762	zgc:110045	96	77.523	Poecilia_mexicana
ENSIPUG00000003932	zgc:110045	97	66.160	ENSPREG00000001797	zgc:110045	95	77.315	Poecilia_reticulata
ENSIPUG00000003932	zgc:110045	74	72.632	ENSPPYG00000011525	-	68	72.632	Pongo_abelii
ENSIPUG00000003932	zgc:110045	76	57.589	ENSPCAG00000001454	PCBP3	65	57.589	Procavia_capensis
ENSIPUG00000003932	zgc:110045	77	74.879	ENSPCOG00000013797	PCBP3	83	81.707	Propithecus_coquereli
ENSIPUG00000003932	zgc:110045	77	70.485	ENSPVAG00000000832	PCBP3	62	71.556	Pteropus_vampyrus
ENSIPUG00000003932	zgc:110045	81	73.853	ENSPNYG00000004637	zgc:110045	99	73.853	Pundamilia_nyererei
ENSIPUG00000003932	zgc:110045	83	89.286	ENSPNAG00000004501	zgc:110045	99	89.286	Pygocentrus_nattereri
ENSIPUG00000003932	zgc:110045	77	75.362	ENSRROG00000034567	PCBP3	83	82.317	Rhinopithecus_roxellana
ENSIPUG00000003932	zgc:110045	77	75.362	ENSSBOG00000005789	PCBP3	83	82.317	Saimiri_boliviensis_boliviensis
ENSIPUG00000003932	zgc:110045	81	76.606	ENSSMAG00000013541	zgc:110045	91	77.315	Scophthalmus_maximus
ENSIPUG00000003932	zgc:110045	97	66.540	ENSSLDG00000021064	zgc:110045	59	66.540	Seriola_lalandi_dorsalis
ENSIPUG00000003932	zgc:110045	51	75.182	ENSSARG00000007629	-	68	75.182	Sorex_araneus
ENSIPUG00000003932	zgc:110045	97	66.540	ENSSPAG00000000563	zgc:110045	79	66.540	Stegastes_partitus
ENSIPUG00000003932	zgc:110045	81	72.018	ENSSSCG00000023041	PCBP3	79	72.018	Sus_scrofa
ENSIPUG00000003932	zgc:110045	73	81.633	ENSTRUG00000017789	zgc:110045	96	81.633	Takifugu_rubripes
ENSIPUG00000003932	zgc:110045	69	77.778	ENSTNIG00000003546	zgc:110045	93	77.778	Tetraodon_nigroviridis
ENSIPUG00000003932	zgc:110045	77	55.072	ENSTBEG00000011882	-	63	55.072	Tupaia_belangeri
ENSIPUG00000003932	zgc:110045	77	71.498	ENSUAMG00000006491	PCBP3	92	77.863	Ursus_americanus
ENSIPUG00000003932	zgc:110045	65	73.184	ENSUMAG00000025403	PCBP3	65	73.184	Ursus_maritimus
ENSIPUG00000003932	zgc:110045	77	70.048	ENSVVUG00000023862	PCBP3	51	77.654	Vulpes_vulpes
ENSIPUG00000003932	zgc:110045	64	77.907	ENSXCOG00000005968	zgc:110045	87	77.907	Xiphophorus_couchianus
ENSIPUG00000003932	zgc:110045	97	66.160	ENSXMAG00000008030	zgc:110045	59	66.160	Xiphophorus_maculatus