EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000003992 (Gene tree)
Gene ID: 108265096
Gene Symbol: -
Alias: -
Full Name: histone-lysine N-methyltransferase SETD1B-A-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 13462 bases
Position: chr5:2454495-2467956
Accession: 108265096
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000005716	RRM_1	PF00076.22	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000005978	-	5206	XM_017467209	ENSIPUP00000005716	1651 (aa)	XP_017322698	-

Gene Model

Click here to download ENSIPUG00000003992's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000003992's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000003992	-	99	54.607	ENSAMXG00000015469	-	100	55.093	Astyanax_mexicanus
ENSIPUG00000003992	-	79	39.774	ENSDARG00000077244	setd1bb	75	40.631	Danio_rerio
ENSIPUG00000003992	-	68	39.689	ENSDARG00000060847	setd1ba	66	38.705	Danio_rerio
ENSIPUG00000003992	-	55	47.103	ENSORLG00015004156	setd1ba	88	46.465	Oryzias_latipes_hsok
ENSIPUG00000003992	-	63	45.485	ENSOMEG00000013204	-	68	46.970	Oryzias_melastigma
ENSIPUG00000003992	-	59	48.062	ENSPLAG00000023459	setd1ba	55	41.935	Poecilia_latipinna
ENSIPUG00000003992	-	59	46.970	ENSPREG00000011589	setd1ba	56	41.667	Poecilia_reticulata