EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000004129 (Gene tree)
Gene ID: 108267002
Gene Symbol: aff3
Alias: id:ibd5053|si:dkey-19j7.2
Full Name: AF4/FMR2 family member 3
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 22243 bases
Position: chr6:1242615-1264857
Accession: 108267002
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000005932	AF-4	PF05110.13	3.4e-125	1	2
ENSIPUP00000005932	AF-4	PF05110.13	3.4e-125	2	2
ENSIPUP00000005952	AF-4	PF05110.13	3.4e-125	1	2
ENSIPUP00000005952	AF-4	PF05110.13	3.4e-125	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000006202	-	4817	XM_017470863	ENSIPUP00000005932	1171 (aa)	XP_017326352	A0A2D0R6Y9
ENSIPUT00000006220	-	4541	XM_017470864	ENSIPUP00000005952	1171 (aa)	XP_017326353	A0A2D0R6Y9

Gene Model

Click here to download ENSIPUG00000004129's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000004129's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000004129	aff3	88	71.134	ENSAMXG00000005439	aff3	99	71.790	Astyanax_mexicanus
ENSIPUG00000004129	aff3	94	44.137	ENSCVAG00000019194	aff3	63	50.066	Cyprinodon_variegatus
ENSIPUG00000004129	aff3	98	58.416	ENSDARG00000079575	aff3	99	58.780	Danio_rerio
ENSIPUG00000004129	aff3	67	59.738	ENSELUG00000020087	aff3	77	54.533	Esox_lucius
ENSIPUG00000004129	aff3	81	37.859	ENSGAFG00000021231	aff3	58	41.167	Gambusia_affinis
ENSIPUG00000004129	aff3	97	43.924	ENSMAMG00000016840	aff3	99	44.036	Mastacembelus_armatus
ENSIPUG00000004129	aff3	100	43.927	ENSORLG00000022089	aff3	60	48.844	Oryzias_latipes
ENSIPUG00000004129	aff3	100	44.589	ENSORLG00020011289	aff3	62	51.395	Oryzias_latipes_hni
ENSIPUG00000004129	aff3	93	43.956	ENSORLG00015014530	aff3	59	50.803	Oryzias_latipes_hsok
ENSIPUG00000004129	aff3	100	44.534	ENSOMEG00000011755	aff3	63	51.917	Oryzias_melastigma
ENSIPUG00000004129	aff3	96	44.656	ENSPFOG00000015830	aff3	62	49.932	Poecilia_formosa
ENSIPUG00000004129	aff3	96	43.902	ENSPREG00000008458	aff3	61	50.000	Poecilia_reticulata
ENSIPUG00000004129	aff3	93	73.411	ENSPNAG00000001361	aff3	97	73.500	Pygocentrus_nattereri
ENSIPUG00000004129	aff3	72	44.162	ENSSFOG00015000615	aff3	93	47.417	Scleropages_formosus
ENSIPUG00000004129	aff3	94	46.313	ENSSLDG00000005399	aff3	100	46.046	Seriola_lalandi_dorsalis
ENSIPUG00000004129	aff3	59	47.561	ENSXMAG00000030063	aff3	56	48.431	Xiphophorus_maculatus