EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000004215 (Gene tree)
Gene ID: 100528999
Gene Symbol: arf5
Alias: -
Full Name: ADP-ribosylation factor 5
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 3065 bases
Position: chr4:418514-421578
Accession: 100528999
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000006264	MMR_HSR1	PF01926.23	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000006541	-	1073	-	ENSIPUP00000006264	180 (aa)	-	-
ENSIPUT00000006579	-	471	-	ENSIPUP00000006296	156 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000004215's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000004215's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000004215	arf5	87	64.331	ENSIPUG00000020344	-	98	64.331
ENSIPUG00000004215	arf5	100	71.111	ENSIPUG00000006913	-	70	71.111
ENSIPUG00000004215	arf5	88	36.196	ENSIPUG00000024239	ARL6	83	36.196
ENSIPUG00000004215	arf5	94	35.714	ENSIPUG00000024487	arfrp1	89	35.714
ENSIPUG00000004215	arf5	91	47.929	ENSIPUG00000019342	Arl4d	85	47.929
ENSIPUG00000004215	arf5	100	98.889	ENSIPUG00000004159	Arf5	100	98.889
ENSIPUG00000004215	arf5	89	31.395	ENSIPUG00000010046	sar1b	87	31.395
ENSIPUG00000004215	arf5	96	46.629	ENSIPUG00000002122	arl4cb	93	46.629
ENSIPUG00000004215	arf5	100	45.000	ENSIPUG00000021388	arl5a	100	45.000
ENSIPUG00000004215	arf5	92	43.030	ENSIPUG00000008227	arl3	91	43.030
ENSIPUG00000004215	arf5	90	33.129	ENSIPUG00000000931	arl8ba	88	33.129
ENSIPUG00000004215	arf5	92	46.108	ENSIPUG00000003931	arl2	90	46.108
ENSIPUG00000004215	arf5	98	57.386	ENSIPUG00000013834	arl1	95	57.386
ENSIPUG00000004215	arf5	97	43.182	ENSIPUG00000019792	arl3l1	94	43.182
ENSIPUG00000004215	arf5	100	81.111	ENSIPUG00000006311	arf1	99	81.111
ENSIPUG00000004215	arf5	92	48.538	ENSIPUG00000006298	-	89	48.538
ENSIPUG00000004215	arf5	100	80.000	ENSIPUG00000007829	arf3a	99	80.000
ENSIPUG00000004215	arf5	100	80.000	ENSIPUG00000023431	arf3b	99	80.000
ENSIPUG00000004215	arf5	52	34.409	ENSIPUG00000024669	SAR1B	71	34.409
ENSIPUG00000004215	arf5	100	80.556	ENSIPUG00000000108	Arf2	99	80.556
ENSIPUG00000004215	arf5	100	92.222	ENSIPUG00000007016	arf4	100	92.222
ENSIPUG00000004215	arf5	98	45.763	ENSIPUG00000023232	arl5c	98	45.763
ENSIPUG00000004215	arf5	96	30.636	ENSIPUG00000021761	arl8bb	93	30.636
ENSIPUG00000004215	arf5	89	30.814	ENSIPUG00000020925	sar1b	87	30.814
ENSIPUG00000004215	arf5	92	43.636	ENSIPUG00000015451	arl3	95	43.636
ENSIPUG00000004215	arf5	96	46.667	ENSIPUG00000021618	arl4ab	93	46.667
ENSIPUG00000004215	arf5	94	42.105	ENSIPUG00000020426	arl11	94	42.105
ENSIPUG00000004215	arf5	97	44.199	ENSIPUG00000024159	arl4a	91	44.199
ENSIPUG00000004215	arf5	98	83.051	ENSIPUG00000011737	arf1	98	83.051
ENSIPUG00000004215	arf5	69	30.370	ENSIPUG00000004177	srprb	53	30.216
ENSIPUG00000004215	arf5	100	43.333	ENSIPUG00000006168	arl5b	100	44.242

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000004215	arf5	100	92.778	ENSG00000004059	ARF5	100	92.778	Homo_sapiens
ENSIPUG00000004215	arf5	99	89.385	ENSAPOG00000000667	-	99	89.385	Acanthochromis_polyacanthus
ENSIPUG00000004215	arf5	100	92.778	ENSAMEG00000004635	ARF5	100	92.778	Ailuropoda_melanoleuca
ENSIPUG00000004215	arf5	99	91.620	ENSACIG00000000467	-	99	91.620	Amphilophus_citrinellus
ENSIPUG00000004215	arf5	100	93.889	ENSACIG00000005843	arf5	100	93.889	Amphilophus_citrinellus
ENSIPUG00000004215	arf5	100	70.000	ENSACIG00000014610	zgc:110286	100	70.000	Amphilophus_citrinellus
ENSIPUG00000004215	arf5	99	87.151	ENSAOCG00000008113	-	99	87.151	Amphiprion_ocellaris
ENSIPUG00000004215	arf5	100	91.667	ENSAOCG00000023329	arf5	100	91.667	Amphiprion_ocellaris
ENSIPUG00000004215	arf5	99	87.151	ENSAPEG00000003087	-	99	87.151	Amphiprion_percula
ENSIPUG00000004215	arf5	100	91.667	ENSAPEG00000024614	arf5	100	91.667	Amphiprion_percula
ENSIPUG00000004215	arf5	99	90.503	ENSATEG00000001302	-	99	90.503	Anabas_testudineus
ENSIPUG00000004215	arf5	100	93.333	ENSATEG00000003053	ARF5	100	93.333	Anabas_testudineus
ENSIPUG00000004215	arf5	100	92.778	ENSANAG00000026446	ARF5	100	92.778	Aotus_nancymaae
ENSIPUG00000004215	arf5	99	91.061	ENSACLG00000025604	-	99	91.061	Astatotilapia_calliptera
ENSIPUG00000004215	arf5	100	94.444	ENSACLG00000005705	arf5	100	94.444	Astatotilapia_calliptera
ENSIPUG00000004215	arf5	100	96.667	ENSAMXG00000038224	-	100	96.667	Astyanax_mexicanus
ENSIPUG00000004215	arf5	100	96.667	ENSAMXG00000004249	-	100	96.667	Astyanax_mexicanus
ENSIPUG00000004215	arf5	100	94.444	ENSAMXG00000031774	ARF5	100	94.444	Astyanax_mexicanus
ENSIPUG00000004215	arf5	100	91.667	ENSAMXG00000031467	arf4a	100	91.667	Astyanax_mexicanus
ENSIPUG00000004215	arf5	100	92.778	ENSBTAG00000009366	ARF5	100	92.778	Bos_taurus
ENSIPUG00000004215	arf5	99	86.592	WBGene00000183	arf-3	99	86.592	Caenorhabditis_elegans
ENSIPUG00000004215	arf5	100	92.778	ENSCJAG00000017604	ARF5	100	92.778	Callithrix_jacchus
ENSIPUG00000004215	arf5	100	78.037	ENSCAFG00020021629	ARF5	100	78.037	Canis_lupus_dingo
ENSIPUG00000004215	arf5	100	92.778	ENSCHIG00000018906	ARF5	100	92.778	Capra_hircus
ENSIPUG00000004215	arf5	100	90.608	ENSCPOG00000006239	ARF5	100	90.608	Cavia_porcellus
ENSIPUG00000004215	arf5	100	92.778	ENSCCAG00000027943	-	100	92.778	Cebus_capucinus
ENSIPUG00000004215	arf5	100	92.778	ENSCATG00000010217	ARF5	100	92.778	Cercocebus_atys
ENSIPUG00000004215	arf5	100	92.778	ENSCLAG00000007930	ARF5	100	92.778	Chinchilla_lanigera
ENSIPUG00000004215	arf5	100	92.778	ENSCSAG00000010208	ARF5	100	92.778	Chlorocebus_sabaeus
ENSIPUG00000004215	arf5	99	78.771	ENSCING00000004846	-	99	78.771	Ciona_intestinalis
ENSIPUG00000004215	arf5	99	76.243	ENSCSAVG00000001959	-	99	76.243	Ciona_savignyi
ENSIPUG00000004215	arf5	89	93.168	ENSCANG00000037234	ARF5	98	93.168	Colobus_angolensis_palliatus
ENSIPUG00000004215	arf5	100	92.778	ENSCGRG00001024919	Arf5	100	92.778	Cricetulus_griseus_chok1gshd
ENSIPUG00000004215	arf5	100	90.000	ENSCSEG00000006004	arf5	100	90.000	Cynoglossus_semilaevis
ENSIPUG00000004215	arf5	100	94.444	ENSCVAG00000007314	-	100	94.444	Cyprinodon_variegatus
ENSIPUG00000004215	arf5	99	91.061	ENSCVAG00000011381	-	99	91.061	Cyprinodon_variegatus
ENSIPUG00000004215	arf5	100	94.444	ENSCVAG00000009124	ARF5	100	94.444	Cyprinodon_variegatus
ENSIPUG00000004215	arf5	100	96.667	ENSDARG00000113899	zgc:77650	100	96.667	Danio_rerio
ENSIPUG00000004215	arf5	100	91.667	ENSDARG00000045989	arf4a	100	91.667	Danio_rerio
ENSIPUG00000004215	arf5	100	97.222	ENSDARG00000070472	arf5	100	97.222	Danio_rerio
ENSIPUG00000004215	arf5	100	70.718	ENSDARG00000074210	ARF5	89	70.718	Danio_rerio
ENSIPUG00000004215	arf5	100	92.778	ENSDORG00000000325	Arf5	100	92.778	Dipodomys_ordii
ENSIPUG00000004215	arf5	100	84.444	FBgn0013749	Arf102F	100	84.444	Drosophila_melanogaster
ENSIPUG00000004215	arf5	97	90.286	ENSETEG00000009275	ARF5	100	90.286	Echinops_telfairi
ENSIPUG00000004215	arf5	99	69.832	ENSEBUG00000004484	-	99	69.832	Eptatretus_burgeri
ENSIPUG00000004215	arf5	100	83.889	ENSEBUG00000014420	-	100	83.889	Eptatretus_burgeri
ENSIPUG00000004215	arf5	99	73.184	ENSELUG00000014428	arf4	99	73.184	Esox_lucius
ENSIPUG00000004215	arf5	100	92.778	ENSFCAG00000005482	ARF5	100	92.778	Felis_catus
ENSIPUG00000004215	arf5	100	93.889	ENSFHEG00000023119	arf5	100	93.889	Fundulus_heteroclitus
ENSIPUG00000004215	arf5	100	90.000	ENSGMOG00000019109	-	99	90.000	Gadus_morhua
ENSIPUG00000004215	arf5	100	90.000	ENSGMOG00000008747	arf5	100	90.000	Gadus_morhua
ENSIPUG00000004215	arf5	99	89.944	ENSGAFG00000005163	-	99	89.944	Gambusia_affinis
ENSIPUG00000004215	arf5	100	94.444	ENSGAFG00000018703	arf5	100	94.444	Gambusia_affinis
ENSIPUG00000004215	arf5	99	87.151	ENSGACG00000012500	-	99	87.151	Gasterosteus_aculeatus
ENSIPUG00000004215	arf5	100	93.889	ENSGACG00000000686	arf5	100	93.889	Gasterosteus_aculeatus
ENSIPUG00000004215	arf5	100	92.778	ENSGAGG00000000231	ARF5	100	92.778	Gopherus_agassizii
ENSIPUG00000004215	arf5	100	92.778	ENSGGOG00000016749	ARF5	100	92.778	Gorilla_gorilla
ENSIPUG00000004215	arf5	99	91.061	ENSHBUG00000011041	-	99	91.061	Haplochromis_burtoni
ENSIPUG00000004215	arf5	100	94.444	ENSHBUG00000008546	arf5	100	94.444	Haplochromis_burtoni
ENSIPUG00000004215	arf5	100	92.778	ENSHGLG00000007494	ARF5	100	92.778	Heterocephalus_glaber_female
ENSIPUG00000004215	arf5	100	91.667	ENSHGLG00100006040	ARF5	60	91.667	Heterocephalus_glaber_male
ENSIPUG00000004215	arf5	99	88.268	ENSHCOG00000015577	-	100	88.268	Hippocampus_comes
ENSIPUG00000004215	arf5	100	92.778	ENSSTOG00000002104	ARF5	100	92.778	Ictidomys_tridecemlineatus
ENSIPUG00000004215	arf5	100	92.778	ENSJJAG00000005105	Arf5	100	92.778	Jaculus_jaculus
ENSIPUG00000004215	arf5	99	91.620	ENSKMAG00000012816	-	99	91.620	Kryptolebias_marmoratus
ENSIPUG00000004215	arf5	100	85.556	ENSLBEG00000012002	-	99	85.556	Labrus_bergylta
ENSIPUG00000004215	arf5	100	91.667	ENSLBEG00000026532	arf5	100	91.667	Labrus_bergylta
ENSIPUG00000004215	arf5	100	92.778	ENSLAFG00000011469	ARF5	100	92.778	Loxodonta_africana
ENSIPUG00000004215	arf5	100	92.778	ENSMFAG00000019772	ARF5	100	92.778	Macaca_fascicularis
ENSIPUG00000004215	arf5	100	92.778	ENSMMUG00000046381	ARF5	100	92.778	Macaca_mulatta
ENSIPUG00000004215	arf5	100	92.778	ENSMNEG00000040893	ARF5	100	92.778	Macaca_nemestrina
ENSIPUG00000004215	arf5	99	89.944	ENSMAMG00000008223	-	99	89.944	Mastacembelus_armatus
ENSIPUG00000004215	arf5	100	92.778	ENSMAMG00000021160	arf5	100	92.778	Mastacembelus_armatus
ENSIPUG00000004215	arf5	100	94.444	ENSMZEG00005015033	arf5	67	94.444	Maylandia_zebra
ENSIPUG00000004215	arf5	87	89.809	ENSMZEG00005019741	-	93	89.809	Maylandia_zebra
ENSIPUG00000004215	arf5	100	92.778	ENSMAUG00000014825	Arf5	100	92.778	Mesocricetus_auratus
ENSIPUG00000004215	arf5	100	92.778	ENSMICG00000000091	ARF5	100	92.778	Microcebus_murinus
ENSIPUG00000004215	arf5	100	92.778	ENSMOCG00000022861	Arf5	100	92.778	Microtus_ochrogaster
ENSIPUG00000004215	arf5	100	92.222	ENSMODG00000015229	ARF5	100	92.222	Monodelphis_domestica
ENSIPUG00000004215	arf5	99	69.832	ENSMALG00000022638	zgc:110286	100	69.832	Monopterus_albus
ENSIPUG00000004215	arf5	99	90.503	ENSMALG00000006020	-	99	90.503	Monopterus_albus
ENSIPUG00000004215	arf5	100	93.333	ENSMALG00000010117	-	100	93.333	Monopterus_albus
ENSIPUG00000004215	arf5	100	92.778	MGP_CAROLIEiJ_G0028156	Arf5	100	92.778	Mus_caroli
ENSIPUG00000004215	arf5	100	92.778	ENSMUSG00000020440	Arf5	100	92.778	Mus_musculus
ENSIPUG00000004215	arf5	100	92.778	MGP_PahariEiJ_G0021914	Arf5	100	92.778	Mus_pahari
ENSIPUG00000004215	arf5	100	92.778	MGP_SPRETEiJ_G0029156	Arf5	100	92.778	Mus_spretus
ENSIPUG00000004215	arf5	100	92.778	ENSMPUG00000006675	ARF5	100	92.778	Mustela_putorius_furo
ENSIPUG00000004215	arf5	100	92.778	ENSMLUG00000017122	ARF5	100	92.778	Myotis_lucifugus
ENSIPUG00000004215	arf5	100	92.778	ENSNGAG00000011743	Arf5	100	92.778	Nannospalax_galili
ENSIPUG00000004215	arf5	100	94.444	ENSNBRG00000018854	arf5	100	94.444	Neolamprologus_brichardi
ENSIPUG00000004215	arf5	100	92.778	ENSODEG00000011800	ARF5	100	92.778	Octodon_degus
ENSIPUG00000004215	arf5	99	91.061	ENSONIG00000014890	-	99	91.061	Oreochromis_niloticus
ENSIPUG00000004215	arf5	100	94.444	ENSONIG00000007594	arf5	100	94.444	Oreochromis_niloticus
ENSIPUG00000004215	arf5	100	92.778	ENSOCUG00000024365	ARF5	100	92.778	Oryctolagus_cuniculus
ENSIPUG00000004215	arf5	99	90.503	ENSORLG00020001755	-	99	90.503	Oryzias_latipes_hni
ENSIPUG00000004215	arf5	99	91.061	ENSOMEG00000000211	-	64	91.061	Oryzias_melastigma
ENSIPUG00000004215	arf5	100	93.889	ENSOMEG00000020821	ARF5	100	93.889	Oryzias_melastigma
ENSIPUG00000004215	arf5	100	92.778	ENSOGAG00000013336	ARF5	100	92.778	Otolemur_garnettii
ENSIPUG00000004215	arf5	100	92.778	ENSPPAG00000037755	ARF5	100	92.778	Pan_paniscus
ENSIPUG00000004215	arf5	100	92.778	ENSPPRG00000004674	ARF5	100	92.778	Panthera_pardus
ENSIPUG00000004215	arf5	100	92.778	ENSPTRG00000019651	ARF5	100	92.778	Pan_troglodytes
ENSIPUG00000004215	arf5	100	92.778	ENSPANG00000032970	ARF5	100	92.778	Papio_anubis
ENSIPUG00000004215	arf5	100	91.667	ENSPKIG00000025349	arf4a	100	91.667	Paramormyrops_kingsleyae
ENSIPUG00000004215	arf5	100	92.778	ENSPKIG00000025381	-	100	92.778	Paramormyrops_kingsleyae
ENSIPUG00000004215	arf5	100	93.333	ENSPKIG00000013814	-	100	93.333	Paramormyrops_kingsleyae
ENSIPUG00000004215	arf5	100	86.667	ENSPMGG00000009985	-	100	86.667	Periophthalmus_magnuspinnatus
ENSIPUG00000004215	arf5	100	92.778	ENSPEMG00000021476	Arf5	100	92.778	Peromyscus_maniculatus_bairdii
ENSIPUG00000004215	arf5	99	79.330	ENSPMAG00000009600	arf4a	100	79.330	Petromyzon_marinus
ENSIPUG00000004215	arf5	99	89.444	ENSPFOG00000017992	-	99	89.444	Poecilia_formosa
ENSIPUG00000004215	arf5	100	94.444	ENSPFOG00000015817	arf5	100	94.444	Poecilia_formosa
ENSIPUG00000004215	arf5	99	89.944	ENSPLAG00000015630	-	99	89.944	Poecilia_latipinna
ENSIPUG00000004215	arf5	100	94.444	ENSPLAG00000006742	arf5	100	94.444	Poecilia_latipinna
ENSIPUG00000004215	arf5	100	94.444	ENSPMEG00000009605	arf5	100	94.444	Poecilia_mexicana
ENSIPUG00000004215	arf5	99	89.944	ENSPMEG00000004624	-	99	89.944	Poecilia_mexicana
ENSIPUG00000004215	arf5	100	92.778	ENSPCOG00000027640	ARF5	100	92.778	Propithecus_coquereli
ENSIPUG00000004215	arf5	100	92.778	ENSPVAG00000013940	ARF5	100	92.778	Pteropus_vampyrus
ENSIPUG00000004215	arf5	100	94.444	ENSPNYG00000001663	arf5	100	94.444	Pundamilia_nyererei
ENSIPUG00000004215	arf5	99	91.061	ENSPNYG00000004931	-	99	91.061	Pundamilia_nyererei
ENSIPUG00000004215	arf5	100	96.667	ENSPNAG00000024427	-	100	96.667	Pygocentrus_nattereri
ENSIPUG00000004215	arf5	100	91.667	ENSPNAG00000004745	arf4a	100	91.667	Pygocentrus_nattereri
ENSIPUG00000004215	arf5	100	72.222	ENSPNAG00000004475	-	100	72.222	Pygocentrus_nattereri
ENSIPUG00000004215	arf5	100	74.444	ENSPNAG00000005054	-	100	74.444	Pygocentrus_nattereri
ENSIPUG00000004215	arf5	100	92.778	ENSRNOG00000007806	Arf5	100	92.778	Rattus_norvegicus
ENSIPUG00000004215	arf5	100	92.778	ENSRBIG00000039868	ARF5	100	92.778	Rhinopithecus_bieti
ENSIPUG00000004215	arf5	100	92.778	ENSRROG00000041157	ARF5	100	92.778	Rhinopithecus_roxellana
ENSIPUG00000004215	arf5	100	92.778	ENSSBOG00000021669	ARF5	100	92.778	Saimiri_boliviensis_boliviensis
ENSIPUG00000004215	arf5	100	92.778	ENSSHAG00000015053	ARF5	100	92.778	Sarcophilus_harrisii
ENSIPUG00000004215	arf5	100	93.333	ENSSFOG00015020707	ARF5	100	93.333	Scleropages_formosus
ENSIPUG00000004215	arf5	100	80.556	ENSSFOG00015007701	-	100	80.556	Scleropages_formosus
ENSIPUG00000004215	arf5	99	86.592	ENSSMAG00000004541	-	99	86.592	Scophthalmus_maximus
ENSIPUG00000004215	arf5	100	92.222	ENSSMAG00000011361	arf5	100	92.222	Scophthalmus_maximus
ENSIPUG00000004215	arf5	100	93.333	ENSSDUG00000005105	arf5	100	93.333	Seriola_dumerili
ENSIPUG00000004215	arf5	100	93.333	ENSSLDG00000017188	arf5	100	93.333	Seriola_lalandi_dorsalis
ENSIPUG00000004215	arf5	100	92.222	ENSSPAG00000014434	arf5	100	92.222	Stegastes_partitus
ENSIPUG00000004215	arf5	99	91.061	ENSSPAG00000022680	-	99	91.061	Stegastes_partitus
ENSIPUG00000004215	arf5	100	92.778	ENSSSCG00000016593	ARF5	100	92.778	Sus_scrofa
ENSIPUG00000004215	arf5	99	83.799	ENSTRUG00000025462	-	100	83.799	Takifugu_rubripes
ENSIPUG00000004215	arf5	99	92.179	ENSTNIG00000003348	arf5	100	92.179	Tetraodon_nigroviridis
ENSIPUG00000004215	arf5	99	82.682	ENSTNIG00000017954	-	100	82.682	Tetraodon_nigroviridis
ENSIPUG00000004215	arf5	90	94.444	ENSTTRG00000006043	ARF5	100	94.444	Tursiops_truncatus
ENSIPUG00000004215	arf5	100	92.778	ENSUAMG00000012982	ARF5	100	92.778	Ursus_americanus
ENSIPUG00000004215	arf5	100	92.778	ENSVVUG00000007062	ARF5	100	92.778	Vulpes_vulpes
ENSIPUG00000004215	arf5	99	89.944	ENSXCOG00000020384	-	99	89.944	Xiphophorus_couchianus
ENSIPUG00000004215	arf5	99	89.944	ENSXMAG00000004558	-	99	89.944	Xiphophorus_maculatus
ENSIPUG00000004215	arf5	100	94.444	ENSXMAG00000015306	arf5	100	94.444	Xiphophorus_maculatus