EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000004313 (Gene tree)
Gene ID: 108266589
Gene Symbol: mrpl30
Alias: zgc:112089
Full Name: mitochondrial ribosomal protein L30
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 3693 bases
Position: chr6:1444171-1447863
Accession: 108266589
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000006214	Ribosomal_L30	PF00327.20	4.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000006490	-	748	XM_017470119	ENSIPUP00000006214	159 (aa)	XP_017325608	A0A2D0R4S9

Gene Model

Click here to download ENSIPUG00000004313's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000004313's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000004313	mrpl30	100	58.642	ENSAPOG00000005884	mrpl30	100	58.642	Acanthochromis_polyacanthus
ENSIPUG00000004313	mrpl30	100	56.790	ENSACIG00000022360	mrpl30	100	56.790	Amphilophus_citrinellus
ENSIPUG00000004313	mrpl30	100	58.642	ENSAOCG00000002976	mrpl30	100	58.642	Amphiprion_ocellaris
ENSIPUG00000004313	mrpl30	100	59.259	ENSAPEG00000006678	mrpl30	100	59.259	Amphiprion_percula
ENSIPUG00000004313	mrpl30	100	59.375	ENSATEG00000008999	mrpl30	100	59.375	Anabas_testudineus
ENSIPUG00000004313	mrpl30	82	61.832	ENSACAG00000000933	-	92	61.832	Anolis_carolinensis
ENSIPUG00000004313	mrpl30	100	58.642	ENSACLG00000001506	mrpl30	100	58.642	Astatotilapia_calliptera
ENSIPUG00000004313	mrpl30	100	74.691	ENSAMXG00000005341	mrpl30	100	74.691	Astyanax_mexicanus
ENSIPUG00000004313	mrpl30	65	61.682	ENSCAFG00000008574	-	69	61.682	Canis_familiaris
ENSIPUG00000004313	mrpl30	69	63.063	ENSTSYG00000030746	-	81	63.063	Carlito_syrichta
ENSIPUG00000004313	mrpl30	79	32.353	ENSCSAVG00000002155	-	64	32.353	Ciona_savignyi
ENSIPUG00000004313	mrpl30	100	57.764	ENSCSEG00000004238	mrpl30	100	57.764	Cynoglossus_semilaevis
ENSIPUG00000004313	mrpl30	100	59.877	ENSCVAG00000018330	mrpl30	100	59.877	Cyprinodon_variegatus
ENSIPUG00000004313	mrpl30	100	70.000	ENSDARG00000069850	mrpl30	100	70.000	Danio_rerio
ENSIPUG00000004313	mrpl30	67	58.879	ENSEBUG00000013592	mrpl30	79	58.879	Eptatretus_burgeri
ENSIPUG00000004313	mrpl30	94	60.000	ENSELUG00000020222	mrpl30	95	60.000	Esox_lucius
ENSIPUG00000004313	mrpl30	97	55.195	ENSFALG00000003937	-	94	55.195	Ficedula_albicollis
ENSIPUG00000004313	mrpl30	93	58.442	ENSFHEG00000012666	mrpl30	79	58.442	Fundulus_heteroclitus
ENSIPUG00000004313	mrpl30	99	56.688	ENSGALG00000016760	-	93	56.688	Gallus_gallus
ENSIPUG00000004313	mrpl30	100	62.346	ENSGAFG00000021234	mrpl30	100	62.346	Gambusia_affinis
ENSIPUG00000004313	mrpl30	100	58.025	ENSHBUG00000005392	mrpl30	100	58.025	Haplochromis_burtoni
ENSIPUG00000004313	mrpl30	67	65.421	ENSHGLG00000019740	-	74	65.421	Heterocephalus_glaber_female
ENSIPUG00000004313	mrpl30	67	65.421	ENSHGLG00100019694	-	74	65.421	Heterocephalus_glaber_male
ENSIPUG00000004313	mrpl30	88	60.417	ENSHCOG00000003687	mrpl30	92	60.417	Hippocampus_comes
ENSIPUG00000004313	mrpl30	70	64.286	ENSSTOG00000033815	-	84	64.286	Ictidomys_tridecemlineatus
ENSIPUG00000004313	mrpl30	100	56.173	ENSKMAG00000001499	mrpl30	100	56.173	Kryptolebias_marmoratus
ENSIPUG00000004313	mrpl30	84	65.414	ENSLBEG00000018368	mrpl30	83	65.414	Labrus_bergylta
ENSIPUG00000004313	mrpl30	72	67.544	ENSLBEG00000027390	-	82	67.544	Labrus_bergylta
ENSIPUG00000004313	mrpl30	100	51.553	ENSLACG00000012777	mrpl30	100	51.553	Latimeria_chalumnae
ENSIPUG00000004313	mrpl30	100	62.893	ENSLOCG00000001452	mrpl30	100	62.893	Lepisosteus_oculatus
ENSIPUG00000004313	mrpl30	100	61.111	ENSMAMG00000016802	mrpl30	100	61.111	Mastacembelus_armatus
ENSIPUG00000004313	mrpl30	100	58.642	ENSMZEG00005022036	mrpl30	100	58.642	Maylandia_zebra
ENSIPUG00000004313	mrpl30	100	58.025	ENSMMOG00000019827	mrpl30	100	58.025	Mola_mola
ENSIPUG00000004313	mrpl30	84	63.910	ENSMALG00000004911	mrpl30	84	63.910	Monopterus_albus
ENSIPUG00000004313	mrpl30	100	56.790	ENSNBRG00000003924	mrpl30	100	56.790	Neolamprologus_brichardi
ENSIPUG00000004313	mrpl30	74	56.410	ENSMEUG00000010134	-	72	56.410	Notamacropus_eugenii
ENSIPUG00000004313	mrpl30	73	65.517	ENSODEG00000010546	-	88	65.517	Octodon_degus
ENSIPUG00000004313	mrpl30	100	57.407	ENSONIG00000014167	mrpl30	100	57.407	Oreochromis_niloticus
ENSIPUG00000004313	mrpl30	91	58.784	ENSORLG00000025091	mrpl30	82	58.784	Oryzias_latipes
ENSIPUG00000004313	mrpl30	91	58.784	ENSORLG00020011064	mrpl30	94	60.417	Oryzias_latipes_hni
ENSIPUG00000004313	mrpl30	89	61.111	ENSORLG00015014430	mrpl30	94	61.111	Oryzias_latipes_hsok
ENSIPUG00000004313	mrpl30	77	63.115	ENSOMEG00000011587	mrpl30	68	63.115	Oryzias_melastigma
ENSIPUG00000004313	mrpl30	100	61.635	ENSPKIG00000012379	mrpl30	100	61.635	Paramormyrops_kingsleyae
ENSIPUG00000004313	mrpl30	82	57.692	ENSPSIG00000011557	-	92	57.692	Pelodiscus_sinensis
ENSIPUG00000004313	mrpl30	89	57.718	ENSPMGG00000010475	mrpl30	94	57.718	Periophthalmus_magnuspinnatus
ENSIPUG00000004313	mrpl30	72	60.000	ENSPMAG00000004676	mrpl30	72	60.000	Petromyzon_marinus
ENSIPUG00000004313	mrpl30	100	61.728	ENSPFOG00000015775	mrpl30	100	61.728	Poecilia_formosa
ENSIPUG00000004313	mrpl30	100	61.728	ENSPLAG00000021371	mrpl30	100	61.728	Poecilia_latipinna
ENSIPUG00000004313	mrpl30	100	61.728	ENSPMEG00000006243	mrpl30	100	61.728	Poecilia_mexicana
ENSIPUG00000004313	mrpl30	100	59.877	ENSPREG00000008569	mrpl30	100	59.877	Poecilia_reticulata
ENSIPUG00000004313	mrpl30	72	56.303	ENSPCAG00000002174	-	93	56.303	Procavia_capensis
ENSIPUG00000004313	mrpl30	100	58.642	ENSPNYG00000014319	mrpl30	100	58.642	Pundamilia_nyererei
ENSIPUG00000004313	mrpl30	87	78.417	ENSPNAG00000009867	mrpl30	87	78.417	Pygocentrus_nattereri
ENSIPUG00000004313	mrpl30	100	59.259	ENSSFOG00015010917	mrpl30	100	59.259	Scleropages_formosus
ENSIPUG00000004313	mrpl30	100	57.233	ENSSMAG00000019930	mrpl30	100	57.233	Scophthalmus_maximus
ENSIPUG00000004313	mrpl30	100	58.385	ENSSDUG00000006705	mrpl30	100	58.385	Seriola_dumerili
ENSIPUG00000004313	mrpl30	100	58.385	ENSSLDG00000005509	mrpl30	100	58.385	Seriola_lalandi_dorsalis
ENSIPUG00000004313	mrpl30	89	45.070	ENSSPUG00000015069	-	87	45.070	Sphenodon_punctatus
ENSIPUG00000004313	mrpl30	100	51.572	ENSSPUG00000009351	-	97	51.572	Sphenodon_punctatus
ENSIPUG00000004313	mrpl30	100	61.111	ENSSPAG00000020142	mrpl30	100	61.111	Stegastes_partitus
ENSIPUG00000004313	mrpl30	74	59.829	ENSTGUG00000010133	-	100	59.829	Taeniopygia_guttata
ENSIPUG00000004313	mrpl30	99	57.595	ENSTRUG00000022654	mrpl30	99	57.595	Takifugu_rubripes
ENSIPUG00000004313	mrpl30	97	55.484	ENSTNIG00000013872	mrpl30	99	55.484	Tetraodon_nigroviridis
ENSIPUG00000004313	mrpl30	87	53.147	ENSVPAG00000011780	-	99	53.147	Vicugna_pacos
ENSIPUG00000004313	mrpl30	79	55.814	ENSVVUG00000010788	-	89	55.814	Vulpes_vulpes
ENSIPUG00000004313	mrpl30	57	52.632	ENSVVUG00000028722	-	86	52.632	Vulpes_vulpes
ENSIPUG00000004313	mrpl30	97	55.696	ENSXETG00000026571	mrpl30	98	55.696	Xenopus_tropicalis
ENSIPUG00000004313	mrpl30	84	69.173	ENSXCOG00000018807	mrpl30	83	69.173	Xiphophorus_couchianus
ENSIPUG00000004313	mrpl30	100	62.963	ENSXMAG00000024725	mrpl30	100	62.963	Xiphophorus_maculatus