EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000004428 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 2712 bases
Position: chr11:3818300-3821011
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000006373	zf-C2H2	PF00096.26	1.4e-39	1	6
ENSIPUP00000006373	zf-C2H2	PF00096.26	1.4e-39	2	6
ENSIPUP00000006373	zf-C2H2	PF00096.26	1.4e-39	3	6
ENSIPUP00000006373	zf-C2H2	PF00096.26	1.4e-39	4	6
ENSIPUP00000006373	zf-C2H2	PF00096.26	1.4e-39	5	6
ENSIPUP00000006373	zf-C2H2	PF00096.26	1.4e-39	6	6
ENSIPUP00000006373	zf-met	PF12874.7	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000006658	-	888	-	ENSIPUP00000006373	295 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000004428's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000004428's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000004428	-	73	55.497	ENSIPUG00000003960	-	83	55.497
ENSIPUG00000004428	-	82	37.755	ENSIPUG00000011258	-	86	39.013
ENSIPUG00000004428	-	90	43.158	ENSIPUG00000011652	znf648	85	43.158
ENSIPUG00000004428	-	80	57.604	ENSIPUG00000021434	-	95	57.604
ENSIPUG00000004428	-	75	31.933	ENSIPUG00000002075	znf341	51	31.933
ENSIPUG00000004428	-	91	64.964	ENSIPUG00000012960	-	81	64.964
ENSIPUG00000004428	-	71	31.844	ENSIPUG00000024004	-	87	31.844
ENSIPUG00000004428	-	94	43.363	ENSIPUG00000004905	znf236	62	43.363
ENSIPUG00000004428	-	73	61.413	ENSIPUG00000021484	-	97	61.413
ENSIPUG00000004428	-	86	61.170	ENSIPUG00000015601	-	60	61.170
ENSIPUG00000004428	-	74	58.152	ENSIPUG00000007934	-	98	58.152
ENSIPUG00000004428	-	85	56.667	ENSIPUG00000001941	-	88	56.667
ENSIPUG00000004428	-	73	53.521	ENSIPUG00000023761	-	56	53.521
ENSIPUG00000004428	-	83	60.526	ENSIPUG00000021527	-	98	60.526
ENSIPUG00000004428	-	82	39.462	ENSIPUG00000008581	znf319b	88	39.462
ENSIPUG00000004428	-	74	42.384	ENSIPUG00000012769	gfi1b	51	42.384
ENSIPUG00000004428	-	81	59.296	ENSIPUG00000022751	-	97	57.561
ENSIPUG00000004428	-	74	33.143	ENSIPUG00000018102	znf646	64	33.143
ENSIPUG00000004428	-	77	55.828	ENSIPUG00000017575	-	63	56.075
ENSIPUG00000004428	-	89	60.000	ENSIPUG00000015121	-	64	60.000
ENSIPUG00000004428	-	73	58.549	ENSIPUG00000005581	-	73	58.549
ENSIPUG00000004428	-	88	53.435	ENSIPUG00000021556	-	98	53.435
ENSIPUG00000004428	-	87	55.814	ENSIPUG00000023688	-	93	61.932
ENSIPUG00000004428	-	72	37.692	ENSIPUG00000000131	snai2	61	37.692
ENSIPUG00000004428	-	88	56.842	ENSIPUG00000015203	-	55	56.842
ENSIPUG00000004428	-	79	51.643	ENSIPUG00000013315	-	98	51.643
ENSIPUG00000004428	-	74	60.000	ENSIPUG00000002655	-	98	60.000
ENSIPUG00000004428	-	72	41.622	ENSIPUG00000011399	zbtb47b	73	41.622
ENSIPUG00000004428	-	88	60.847	ENSIPUG00000015177	-	66	60.847
ENSIPUG00000004428	-	76	61.170	ENSIPUG00000021998	-	95	61.170
ENSIPUG00000004428	-	72	48.649	ENSIPUG00000024011	-	51	48.649
ENSIPUG00000004428	-	86	57.265	ENSIPUG00000013083	-	59	57.265
ENSIPUG00000004428	-	74	59.574	ENSIPUG00000016075	-	97	59.574
ENSIPUG00000004428	-	81	34.074	ENSIPUG00000015037	znf711	50	34.074
ENSIPUG00000004428	-	75	44.351	ENSIPUG00000019205	-	75	45.498
ENSIPUG00000004428	-	91	55.488	ENSIPUG00000015233	-	91	55.336
ENSIPUG00000004428	-	97	63.033	ENSIPUG00000015468	-	91	63.033
ENSIPUG00000004428	-	93	57.075	ENSIPUG00000023635	-	95	61.856
ENSIPUG00000004428	-	89	55.172	ENSIPUG00000021472	-	84	55.172
ENSIPUG00000004428	-	78	62.245	ENSIPUG00000009750	-	94	62.245
ENSIPUG00000004428	-	91	51.568	ENSIPUG00000006936	-	95	51.568
ENSIPUG00000004428	-	80	39.623	ENSIPUG00000001248	prdm5	72	39.623
ENSIPUG00000004428	-	78	58.685	ENSIPUG00000022741	-	79	58.685
ENSIPUG00000004428	-	79	38.400	ENSIPUG00000013526	-	86	38.400
ENSIPUG00000004428	-	75	50.549	ENSIPUG00000016009	znf596	63	50.549
ENSIPUG00000004428	-	80	37.864	ENSIPUG00000015844	snai1b	56	37.864
ENSIPUG00000004428	-	83	59.358	ENSIPUG00000021441	-	98	59.358
ENSIPUG00000004428	-	87	45.732	ENSIPUG00000012109	ZN12	58	45.732
ENSIPUG00000004428	-	77	57.343	ENSIPUG00000013065	-	98	56.140
ENSIPUG00000004428	-	86	64.198	ENSIPUG00000015294	-	54	64.198
ENSIPUG00000004428	-	78	57.895	ENSIPUG00000011073	-	97	57.895
ENSIPUG00000004428	-	72	40.000	ENSIPUG00000012830	-	77	40.000
ENSIPUG00000004428	-	88	65.476	ENSIPUG00000015400	-	98	60.870
ENSIPUG00000004428	-	73	63.025	ENSIPUG00000005339	-	83	63.025
ENSIPUG00000004428	-	77	39.552	ENSIPUG00000003040	zbtb47a	83	39.552
ENSIPUG00000004428	-	79	57.746	ENSIPUG00000006916	-	78	57.746
ENSIPUG00000004428	-	72	59.509	ENSIPUG00000005733	-	67	59.509
ENSIPUG00000004428	-	90	57.820	ENSIPUG00000021518	-	97	57.820
ENSIPUG00000004428	-	91	62.911	ENSIPUG00000021515	-	93	62.911
ENSIPUG00000004428	-	77	42.925	ENSIPUG00000007076	-	91	36.735
ENSIPUG00000004428	-	86	56.477	ENSIPUG00000003011	-	55	56.477
ENSIPUG00000004428	-	92	50.362	ENSIPUG00000023513	-	53	50.362
ENSIPUG00000004428	-	81	48.815	ENSIPUG00000022266	ZNF135	74	48.815

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000004428	-	73	46.226	ENSAPOG00000004328	-	88	46.226	Acanthochromis_polyacanthus
ENSIPUG00000004428	-	75	42.920	ENSAPOG00000013511	-	57	42.593	Acanthochromis_polyacanthus
ENSIPUG00000004428	-	88	42.640	ENSACIG00000010739	-	91	42.640	Amphilophus_citrinellus
ENSIPUG00000004428	-	72	46.226	ENSAOCG00000007045	-	87	46.226	Amphiprion_ocellaris
ENSIPUG00000004428	-	73	46.114	ENSAPEG00000016483	-	69	41.916	Amphiprion_percula
ENSIPUG00000004428	-	72	47.150	ENSAPEG00000001596	-	78	47.150	Amphiprion_percula
ENSIPUG00000004428	-	75	46.698	ENSATEG00000006085	-	85	46.698	Anabas_testudineus
ENSIPUG00000004428	-	98	56.364	ENSACAG00000000082	-	99	56.364	Anolis_carolinensis
ENSIPUG00000004428	-	72	53.684	ENSACAG00000025537	-	96	53.684	Anolis_carolinensis
ENSIPUG00000004428	-	72	58.294	ENSAMXG00000032237	-	93	58.294	Astyanax_mexicanus
ENSIPUG00000004428	-	75	63.924	ENSAMXG00000035145	-	70	63.924	Astyanax_mexicanus
ENSIPUG00000004428	-	79	56.019	ENSAMXG00000036257	-	95	56.019	Astyanax_mexicanus
ENSIPUG00000004428	-	73	60.000	ENSAMXG00000033013	-	83	60.000	Astyanax_mexicanus
ENSIPUG00000004428	-	78	62.162	ENSAMXG00000035949	-	79	62.162	Astyanax_mexicanus
ENSIPUG00000004428	-	89	55.093	ENSAMXG00000012873	-	96	56.923	Astyanax_mexicanus
ENSIPUG00000004428	-	83	55.924	ENSAMXG00000026143	-	98	56.219	Astyanax_mexicanus
ENSIPUG00000004428	-	72	46.948	ENSCVAG00000011235	-	94	46.948	Cyprinodon_variegatus
ENSIPUG00000004428	-	96	47.716	ENSELUG00000021287	-	89	47.716	Esox_lucius
ENSIPUG00000004428	-	78	47.340	ENSELUG00000013844	-	83	37.826	Esox_lucius
ENSIPUG00000004428	-	72	48.372	ENSELUG00000013357	-	86	48.372	Esox_lucius
ENSIPUG00000004428	-	79	46.766	ENSFHEG00000019915	-	74	46.766	Fundulus_heteroclitus
ENSIPUG00000004428	-	88	42.515	ENSGMOG00000003238	-	100	45.333	Gadus_morhua
ENSIPUG00000004428	-	81	45.283	ENSGAFG00000012977	-	93	45.283	Gambusia_affinis
ENSIPUG00000004428	-	75	45.714	ENSGAFG00000003150	-	86	42.593	Gambusia_affinis
ENSIPUG00000004428	-	76	46.083	ENSKMAG00000004988	-	90	46.083	Kryptolebias_marmoratus
ENSIPUG00000004428	-	74	48.438	ENSLOCG00000014144	-	100	48.438	Lepisosteus_oculatus
ENSIPUG00000004428	-	75	48.810	ENSLOCG00000014366	-	99	45.622	Lepisosteus_oculatus
ENSIPUG00000004428	-	74	46.114	ENSMAMG00000016542	-	64	46.114	Mastacembelus_armatus
ENSIPUG00000004428	-	73	46.226	ENSMAMG00000019301	-	93	44.578	Mastacembelus_armatus
ENSIPUG00000004428	-	75	39.604	ENSMMOG00000009852	-	85	41.615	Mola_mola
ENSIPUG00000004428	-	72	44.444	ENSMALG00000005554	-	88	42.708	Monopterus_albus
ENSIPUG00000004428	-	72	45.370	ENSOCUG00000005876	-	100	46.226	Oryctolagus_cuniculus
ENSIPUG00000004428	-	74	50.000	ENSPKIG00000006616	-	59	50.000	Paramormyrops_kingsleyae
ENSIPUG00000004428	-	75	45.223	ENSPMGG00000017633	-	86	45.223	Periophthalmus_magnuspinnatus
ENSIPUG00000004428	-	81	44.811	ENSPFOG00000010682	-	97	42.584	Poecilia_formosa
ENSIPUG00000004428	-	80	38.608	ENSPLAG00000002892	-	68	39.815	Poecilia_latipinna
ENSIPUG00000004428	-	81	44.811	ENSPMEG00000001399	-	89	44.811	Poecilia_mexicana
ENSIPUG00000004428	-	81	44.811	ENSPREG00000001386	-	93	44.811	Poecilia_reticulata
ENSIPUG00000004428	-	72	39.062	ENSPREG00000002582	-	60	39.062	Poecilia_reticulata
ENSIPUG00000004428	-	87	41.629	ENSPNAG00000025570	-	91	42.453	Pygocentrus_nattereri
ENSIPUG00000004428	-	84	60.909	ENSPNAG00000000219	-	93	60.909	Pygocentrus_nattereri
ENSIPUG00000004428	-	85	55.212	ENSPNAG00000015116	-	71	55.212	Pygocentrus_nattereri
ENSIPUG00000004428	-	75	51.613	ENSSFOG00015006108	-	56	51.613	Scleropages_formosus
ENSIPUG00000004428	-	88	47.015	ENSSMAG00000009115	-	87	53.030	Scophthalmus_maximus
ENSIPUG00000004428	-	73	46.226	ENSSDUG00000006463	-	91	46.226	Seriola_dumerili
ENSIPUG00000004428	-	89	45.596	ENSSDUG00000002195	-	97	45.596	Seriola_dumerili
ENSIPUG00000004428	-	78	43.182	ENSSLDG00000006724	-	99	43.182	Seriola_lalandi_dorsalis
ENSIPUG00000004428	-	77	53.271	ENSSLDG00000020727	-	96	53.271	Seriola_lalandi_dorsalis
ENSIPUG00000004428	-	72	59.211	ENSSPAG00000021008	-	92	48.454	Stegastes_partitus
ENSIPUG00000004428	-	79	42.786	ENSSPAG00000012960	-	79	42.786	Stegastes_partitus
ENSIPUG00000004428	-	83	47.482	ENSTRUG00000005321	-	98	47.482	Takifugu_rubripes
ENSIPUG00000004428	-	76	43.810	ENSTRUG00000021675	-	76	43.810	Takifugu_rubripes
ENSIPUG00000004428	-	77	42.381	ENSTNIG00000008200	-	99	42.381	Tetraodon_nigroviridis
ENSIPUG00000004428	-	77	49.367	ENSTNIG00000000320	-	100	50.943	Tetraodon_nigroviridis
ENSIPUG00000004428	-	87	53.750	ENSXETG00000006575	znf420	91	53.750	Xenopus_tropicalis
ENSIPUG00000004428	-	75	48.780	ENSXCOG00000009665	-	81	44.860	Xiphophorus_couchianus
ENSIPUG00000004428	-	76	45.283	ENSXMAG00000028625	-	89	45.283	Xiphophorus_maculatus