EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000004434 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 5441 bases
Position: chr29:3848952-3854392
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000006384	RVT_1	PF00078.27	2.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000006669	-	528	-	ENSIPUP00000006384	175 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000004434's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000004434's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000004434	-	79	60.870	ENSIPUG00000007789	-	56	60.870
ENSIPUG00000004434	-	83	59.524	ENSIPUG00000003714	-	71	59.524
ENSIPUG00000004434	-	76	64.744	ENSIPUG00000017577	-	78	64.744
ENSIPUG00000004434	-	81	60.976	ENSIPUG00000017481	-	83	60.976
ENSIPUG00000004434	-	84	61.765	ENSIPUG00000001254	-	66	61.765
ENSIPUG00000004434	-	79	63.975	ENSIPUG00000018566	-	77	64.375
ENSIPUG00000004434	-	84	62.353	ENSIPUG00000001282	-	61	62.353

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000004434	-	77	39.490	ENSAPEG00000008260	-	67	39.490	Amphiprion_percula
ENSIPUG00000004434	-	84	40.828	ENSAPEG00000001164	-	66	40.828	Amphiprion_percula
ENSIPUG00000004434	-	78	57.233	ENSATEG00000024731	-	70	57.233	Anabas_testudineus
ENSIPUG00000004434	-	84	47.647	ENSATEG00000010018	-	50	47.647	Anabas_testudineus
ENSIPUG00000004434	-	81	38.788	ENSACAG00000028706	-	62	38.788	Anolis_carolinensis
ENSIPUG00000004434	-	67	39.716	ENSACAG00000028434	-	51	42.675	Anolis_carolinensis
ENSIPUG00000004434	-	84	45.294	ENSACLG00000021947	-	55	45.294	Astatotilapia_calliptera
ENSIPUG00000004434	-	84	45.882	ENSACLG00000003644	-	52	45.882	Astatotilapia_calliptera
ENSIPUG00000004434	-	64	58.407	ENSCVAG00000019758	-	77	58.407	Cyprinodon_variegatus
ENSIPUG00000004434	-	84	43.195	ENSDARG00000116065	CR848040.3	55	43.195	Danio_rerio
ENSIPUG00000004434	-	84	38.095	ENSELUG00000019648	-	58	38.095	Esox_lucius
ENSIPUG00000004434	-	84	44.706	ENSFHEG00000017568	-	56	44.706	Fundulus_heteroclitus
ENSIPUG00000004434	-	81	39.264	ENSHBUG00000014670	-	50	39.264	Haplochromis_burtoni
ENSIPUG00000004434	-	79	41.935	ENSKMAG00000007346	-	61	41.935	Kryptolebias_marmoratus
ENSIPUG00000004434	-	55	42.268	ENSLBEG00000020214	-	60	42.268	Labrus_bergylta
ENSIPUG00000004434	-	76	51.282	ENSLBEG00000009763	-	54	51.282	Labrus_bergylta
ENSIPUG00000004434	-	78	51.250	ENSLBEG00000028866	-	51	51.250	Labrus_bergylta
ENSIPUG00000004434	-	78	50.625	ENSLBEG00000013551	-	58	50.625	Labrus_bergylta
ENSIPUG00000004434	-	74	42.105	ENSLACG00000022619	-	54	42.105	Latimeria_chalumnae
ENSIPUG00000004434	-	79	36.420	ENSLACG00000007146	-	56	36.420	Latimeria_chalumnae
ENSIPUG00000004434	-	84	36.686	ENSMAMG00000002714	-	58	36.686	Mastacembelus_armatus
ENSIPUG00000004434	-	71	34.932	ENSMAMG00000014970	-	52	34.932	Mastacembelus_armatus
ENSIPUG00000004434	-	69	43.056	ENSMAMG00000016074	-	59	43.056	Mastacembelus_armatus
ENSIPUG00000004434	-	83	35.928	ENSMAMG00000011020	-	56	35.928	Mastacembelus_armatus
ENSIPUG00000004434	-	84	47.059	ENSMZEG00005022672	-	53	47.059	Maylandia_zebra
ENSIPUG00000004434	-	70	38.194	ENSMMOG00000010846	-	84	38.571	Mola_mola
ENSIPUG00000004434	-	84	47.059	ENSORLG00000026882	-	60	47.059	Oryzias_latipes
ENSIPUG00000004434	-	76	50.000	ENSORLG00000027051	-	51	50.000	Oryzias_latipes
ENSIPUG00000004434	-	83	34.524	ENSORLG00000025528	-	55	34.524	Oryzias_latipes
ENSIPUG00000004434	-	84	46.471	ENSORLG00000024021	-	65	46.471	Oryzias_latipes
ENSIPUG00000004434	-	84	47.059	ENSORLG00000028122	-	50	47.059	Oryzias_latipes
ENSIPUG00000004434	-	84	47.647	ENSORLG00020007610	-	53	47.647	Oryzias_latipes_hni
ENSIPUG00000004434	-	75	49.677	ENSORLG00020016174	-	51	49.677	Oryzias_latipes_hni
ENSIPUG00000004434	-	86	39.884	ENSORLG00020002943	-	78	39.884	Oryzias_latipes_hni
ENSIPUG00000004434	-	84	48.235	ENSORLG00020008245	-	53	48.235	Oryzias_latipes_hni
ENSIPUG00000004434	-	84	47.647	ENSORLG00020022160	-	51	47.647	Oryzias_latipes_hni
ENSIPUG00000004434	-	84	48.235	ENSORLG00015016856	-	51	48.235	Oryzias_latipes_hsok
ENSIPUG00000004434	-	84	47.059	ENSORLG00015022051	-	64	47.059	Oryzias_latipes_hsok
ENSIPUG00000004434	-	81	48.171	ENSORLG00015020409	-	52	48.171	Oryzias_latipes_hsok
ENSIPUG00000004434	-	84	48.235	ENSORLG00015019038	-	51	48.235	Oryzias_latipes_hsok
ENSIPUG00000004434	-	84	47.059	ENSORLG00015002366	-	54	47.059	Oryzias_latipes_hsok
ENSIPUG00000004434	-	84	48.235	ENSORLG00015001218	-	51	48.235	Oryzias_latipes_hsok
ENSIPUG00000004434	-	73	36.000	ENSOMEG00000016252	-	59	36.310	Oryzias_melastigma
ENSIPUG00000004434	-	84	33.929	ENSPKIG00000004473	-	60	33.929	Paramormyrops_kingsleyae
ENSIPUG00000004434	-	79	38.788	ENSPKIG00000017113	-	54	38.788	Paramormyrops_kingsleyae
ENSIPUG00000004434	-	84	34.911	ENSPFOG00000024325	-	66	34.911	Poecilia_formosa
ENSIPUG00000004434	-	78	44.304	ENSPNAG00000002341	-	50	44.304	Pygocentrus_nattereri
ENSIPUG00000004434	-	78	43.671	ENSPNAG00000014844	-	56	43.671	Pygocentrus_nattereri
ENSIPUG00000004434	-	84	52.353	ENSPNAG00000003097	-	57	52.353	Pygocentrus_nattereri
ENSIPUG00000004434	-	54	48.936	ENSPNAG00000027454	-	65	48.571	Pygocentrus_nattereri
ENSIPUG00000004434	-	84	34.118	ENSSPAG00000005749	-	55	34.118	Stegastes_partitus
ENSIPUG00000004434	-	78	45.912	ENSTRUG00000020404	-	63	45.912	Takifugu_rubripes