EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000004536 (Gene tree)
Gene ID: 108266106
Gene Symbol: setdb1
Alias: im:7143091|wu:fa04a12|wu:fj80h02|zgc:152899
Full Name: SET domain bifurcated 1
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 24438 bases
Position: chr1:9295978-9320415
Accession: 108266106
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000006696	MBD	PF01429.19	1.8e-09	1	1
ENSIPUP00000006645	MBD	PF01429.19	2e-09	1	1
ENSIPUP00000006668	MBD	PF01429.19	2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000006934	-	8177	XM_017469115	ENSIPUP00000006645	1233 (aa)	XP_017324604	A0A2D0R1U2
ENSIPUT00000006990	-	7832	XM_017469132	ENSIPUP00000006696	1118 (aa)	XP_017324621	-
ENSIPUT00000006962	-	8085	-	ENSIPUP00000006668	1233 (aa)	-	A0A2D0R1U2

Gene Model

Click here to download ENSIPUG00000004536's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000004536's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000004536	setdb1	60	67.143	ENSIPUG00000007923	setdb1a	89	40.159

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000004536	setdb1	98	72.067	ENSG00000143379	SETDB1	89	65.842	Homo_sapiens
ENSIPUG00000004536	setdb1	98	71.246	ENSAPOG00000016228	setdb1b	98	67.809	Acanthochromis_polyacanthus
ENSIPUG00000004536	setdb1	98	72.989	ENSAMEG00000001160	SETDB1	87	72.989	Ailuropoda_melanoleuca
ENSIPUG00000004536	setdb1	99	73.273	ENSACIG00000007359	setdb1b	99	69.845	Amphilophus_citrinellus
ENSIPUG00000004536	setdb1	99	67.429	ENSAOCG00000005586	setdb1b	99	67.457	Amphiprion_ocellaris
ENSIPUG00000004536	setdb1	99	72.053	ENSAPEG00000007774	setdb1b	99	67.372	Amphiprion_percula
ENSIPUG00000004536	setdb1	98	69.444	ENSATEG00000023520	setdb1b	98	67.273	Anabas_testudineus
ENSIPUG00000004536	setdb1	99	65.517	ENSAPLG00000013908	SETDB1	90	65.517	Anas_platyrhynchos
ENSIPUG00000004536	setdb1	98	72.067	ENSANAG00000001819	SETDB1	90	65.842	Aotus_nancymaae
ENSIPUG00000004536	setdb1	98	72.139	ENSACLG00000020489	setdb1b	98	68.966	Astatotilapia_calliptera
ENSIPUG00000004536	setdb1	71	43.367	ENSAMXG00000010030	setdb1a	63	42.857	Astyanax_mexicanus
ENSIPUG00000004536	setdb1	95	82.672	ENSAMXG00000016168	setdb1b	100	85.376	Astyanax_mexicanus
ENSIPUG00000004536	setdb1	97	72.159	ENSBTAG00000000098	SETDB1	87	73.684	Bos_taurus
ENSIPUG00000004536	setdb1	66	72.067	ENSCJAG00000006972	SETDB1	89	65.842	Callithrix_jacchus
ENSIPUG00000004536	setdb1	98	72.989	ENSCAFG00000023501	SETDB1	87	72.989	Canis_familiaris
ENSIPUG00000004536	setdb1	98	72.989	ENSCAFG00020013596	SETDB1	89	72.989	Canis_lupus_dingo
ENSIPUG00000004536	setdb1	98	72.989	ENSCHIG00000010698	SETDB1	87	72.989	Capra_hircus
ENSIPUG00000004536	setdb1	81	61.831	ENSTSYG00000012646	SETDB1	92	57.467	Carlito_syrichta
ENSIPUG00000004536	setdb1	70	83.616	ENSCAPG00000013619	SETDB1	92	83.616	Cavia_aperea
ENSIPUG00000004536	setdb1	98	72.067	ENSCPOG00000001632	SETDB1	89	65.842	Cavia_porcellus
ENSIPUG00000004536	setdb1	88	72.067	ENSCCAG00000024882	SETDB1	90	65.842	Cebus_capucinus
ENSIPUG00000004536	setdb1	98	72.626	ENSCATG00000044888	SETDB1	89	66.337	Cercocebus_atys
ENSIPUG00000004536	setdb1	98	72.067	ENSCLAG00000000242	SETDB1	89	65.842	Chinchilla_lanigera
ENSIPUG00000004536	setdb1	56	72.067	ENSCSAG00000018034	SETDB1	90	65.842	Chlorocebus_sabaeus
ENSIPUG00000004536	setdb1	95	76.000	ENSCHOG00000004013	SETDB1	85	75.333	Choloepus_hoffmanni
ENSIPUG00000004536	setdb1	99	65.196	ENSCPBG00000008716	SETDB1	90	64.115	Chrysemys_picta_bellii
ENSIPUG00000004536	setdb1	80	82.051	ENSCANG00000036388	SETDB1	79	82.051	Colobus_angolensis_palliatus
ENSIPUG00000004536	setdb1	98	72.626	ENSCGRG00001010822	Setdb1	92	65.385	Cricetulus_griseus_chok1gshd
ENSIPUG00000004536	setdb1	98	72.626	ENSCGRG00000005953	Setdb1	92	65.385	Cricetulus_griseus_crigri
ENSIPUG00000004536	setdb1	94	72.431	ENSCSEG00000002988	setdb1b	99	67.126	Cynoglossus_semilaevis
ENSIPUG00000004536	setdb1	96	70.110	ENSCVAG00000008877	setdb1b	98	66.559	Cyprinodon_variegatus
ENSIPUG00000004536	setdb1	100	82.424	ENSDARG00000099021	setdb1b	100	78.960	Danio_rerio
ENSIPUG00000004536	setdb1	98	72.067	ENSDNOG00000007754	SETDB1	89	65.842	Dasypus_novemcinctus
ENSIPUG00000004536	setdb1	97	72.159	ENSDORG00000006830	Setdb1	87	71.591	Dipodomys_ordii
ENSIPUG00000004536	setdb1	73	47.021	ENSEBUG00000005735	setdb1b	95	46.482	Eptatretus_burgeri
ENSIPUG00000004536	setdb1	98	72.989	ENSEASG00005002061	SETDB1	89	67.005	Equus_asinus_asinus
ENSIPUG00000004536	setdb1	98	72.989	ENSECAG00000023954	SETDB1	87	72.989	Equus_caballus
ENSIPUG00000004536	setdb1	80	72.989	ENSEEUG00000015825	SETDB1	70	68.586	Erinaceus_europaeus
ENSIPUG00000004536	setdb1	96	74.673	ENSELUG00000013948	setdb1b	99	71.347	Esox_lucius
ENSIPUG00000004536	setdb1	69	68.041	ENSELUG00000006204	-	74	68.041	Esox_lucius
ENSIPUG00000004536	setdb1	98	72.989	ENSFCAG00000009655	SETDB1	87	72.989	Felis_catus
ENSIPUG00000004536	setdb1	97	72.067	ENSFDAG00000021515	SETDB1	89	65.842	Fukomys_damarensis
ENSIPUG00000004536	setdb1	96	78.689	ENSFHEG00000022195	setdb1b	98	65.779	Fundulus_heteroclitus
ENSIPUG00000004536	setdb1	96	68.421	ENSGMOG00000005993	setdb1b	99	64.212	Gadus_morhua
ENSIPUG00000004536	setdb1	99	66.010	ENSGALG00000024051	SETDB1	82	66.010	Gallus_gallus
ENSIPUG00000004536	setdb1	90	81.858	ENSGAFG00000012805	setdb1b	98	65.534	Gambusia_affinis
ENSIPUG00000004536	setdb1	98	64.088	ENSGACG00000011675	setdb1b	99	61.994	Gasterosteus_aculeatus
ENSIPUG00000004536	setdb1	100	65.196	ENSGAGG00000005348	SETDB1	90	65.196	Gopherus_agassizii
ENSIPUG00000004536	setdb1	98	72.067	ENSGGOG00000016308	SETDB1	89	65.842	Gorilla_gorilla
ENSIPUG00000004536	setdb1	98	72.139	ENSHBUG00000004618	setdb1b	98	68.885	Haplochromis_burtoni
ENSIPUG00000004536	setdb1	97	72.067	ENSHGLG00000011098	SETDB1	87	71.508	Heterocephalus_glaber_female
ENSIPUG00000004536	setdb1	97	72.067	ENSHGLG00100009789	SETDB1	92	71.508	Heterocephalus_glaber_male
ENSIPUG00000004536	setdb1	99	70.891	ENSHCOG00000014567	setdb1b	98	65.944	Hippocampus_comes
ENSIPUG00000004536	setdb1	88	72.067	ENSSTOG00000006770	SETDB1	87	71.508	Ictidomys_tridecemlineatus
ENSIPUG00000004536	setdb1	98	68.164	ENSKMAG00000001197	setdb1b	99	65.012	Kryptolebias_marmoratus
ENSIPUG00000004536	setdb1	98	71.689	ENSLBEG00000025862	setdb1b	99	67.866	Labrus_bergylta
ENSIPUG00000004536	setdb1	99	73.837	ENSLACG00000011159	SETDB1	92	73.256	Latimeria_chalumnae
ENSIPUG00000004536	setdb1	98	72.989	ENSLAFG00000004006	SETDB1	87	72.989	Loxodonta_africana
ENSIPUG00000004536	setdb1	98	72.067	ENSMFAG00000042328	SETDB1	89	65.842	Macaca_fascicularis
ENSIPUG00000004536	setdb1	98	72.067	ENSMMUG00000023235	SETDB1	89	65.842	Macaca_mulatta
ENSIPUG00000004536	setdb1	98	72.067	ENSMNEG00000017223	SETDB1	89	65.842	Macaca_nemestrina
ENSIPUG00000004536	setdb1	98	72.067	ENSMLEG00000033050	SETDB1	89	65.842	Mandrillus_leucophaeus
ENSIPUG00000004536	setdb1	98	71.499	ENSMAMG00000015176	setdb1b	85	67.854	Mastacembelus_armatus
ENSIPUG00000004536	setdb1	98	72.139	ENSMZEG00005016099	setdb1b	98	68.966	Maylandia_zebra
ENSIPUG00000004536	setdb1	85	59.583	ENSMGAG00000001018	SETDB1	86	59.583	Meleagris_gallopavo
ENSIPUG00000004536	setdb1	94	73.743	ENSMAUG00000021391	Setdb1	91	66.346	Mesocricetus_auratus
ENSIPUG00000004536	setdb1	98	72.989	ENSMICG00000000425	SETDB1	89	67.005	Microcebus_murinus
ENSIPUG00000004536	setdb1	88	72.626	ENSMOCG00000017407	Setdb1	94	66.337	Microtus_ochrogaster
ENSIPUG00000004536	setdb1	100	72.211	ENSMMOG00000016162	setdb1b	99	69.016	Mola_mola
ENSIPUG00000004536	setdb1	97	73.333	ENSMODG00000018821	SETDB1	80	67.380	Monodelphis_domestica
ENSIPUG00000004536	setdb1	98	72.234	ENSMALG00000007801	setdb1b	99	69.300	Monopterus_albus
ENSIPUG00000004536	setdb1	98	72.626	MGP_CAROLIEiJ_G0025342	Setdb1	89	66.337	Mus_caroli
ENSIPUG00000004536	setdb1	98	72.626	ENSMUSG00000015697	Setdb1	87	72.067	Mus_musculus
ENSIPUG00000004536	setdb1	98	72.989	ENSMPUG00000004298	SETDB1	97	51.876	Mustela_putorius_furo
ENSIPUG00000004536	setdb1	66	72.989	ENSMLUG00000010486	SETDB1	89	67.005	Myotis_lucifugus
ENSIPUG00000004536	setdb1	98	72.067	ENSNGAG00000020151	Setdb1	89	65.842	Nannospalax_galili
ENSIPUG00000004536	setdb1	98	73.191	ENSNBRG00000003147	setdb1b	99	69.408	Neolamprologus_brichardi
ENSIPUG00000004536	setdb1	98	66.667	ENSNLEG00000009996	SETDB1	89	61.395	Nomascus_leucogenys
ENSIPUG00000004536	setdb1	97	72.414	ENSMEUG00000000555	-	87	72.515	Notamacropus_eugenii
ENSIPUG00000004536	setdb1	80	77.564	ENSMEUG00000006544	-	74	72.989	Notamacropus_eugenii
ENSIPUG00000004536	setdb1	96	60.127	ENSOPRG00000015349	SETDB1	89	60.127	Ochotona_princeps
ENSIPUG00000004536	setdb1	98	72.067	ENSODEG00000012471	SETDB1	89	65.842	Octodon_degus
ENSIPUG00000004536	setdb1	98	73.035	ENSONIG00000006454	setdb1b	99	69.474	Oreochromis_niloticus
ENSIPUG00000004536	setdb1	98	70.718	ENSOCUG00000003642	SETDB1	97	57.481	Oryctolagus_cuniculus
ENSIPUG00000004536	setdb1	98	69.417	ENSORLG00000010602	setdb1b	98	67.490	Oryzias_latipes
ENSIPUG00000004536	setdb1	98	69.082	ENSORLG00015014543	setdb1b	98	67.460	Oryzias_latipes_hsok
ENSIPUG00000004536	setdb1	88	85.253	ENSOMEG00000009457	setdb1b	99	68.141	Oryzias_melastigma
ENSIPUG00000004536	setdb1	91	72.989	ENSOGAG00000010320	SETDB1	85	67.005	Otolemur_garnettii
ENSIPUG00000004536	setdb1	98	72.989	ENSOARG00000020880	SETDB1	89	67.005	Ovis_aries
ENSIPUG00000004536	setdb1	98	72.067	ENSPPAG00000041015	SETDB1	89	65.842	Pan_paniscus
ENSIPUG00000004536	setdb1	98	72.989	ENSPPRG00000005462	SETDB1	87	72.989	Panthera_pardus
ENSIPUG00000004536	setdb1	98	72.989	ENSPTIG00000014233	SETDB1	87	72.989	Panthera_tigris_altaica
ENSIPUG00000004536	setdb1	98	72.067	ENSPTRG00000001267	SETDB1	89	65.842	Pan_troglodytes
ENSIPUG00000004536	setdb1	98	72.067	ENSPANG00000020214	SETDB1	89	65.842	Papio_anubis
ENSIPUG00000004536	setdb1	98	72.397	ENSPKIG00000010963	setdb1b	99	71.429	Paramormyrops_kingsleyae
ENSIPUG00000004536	setdb1	64	53.951	ENSPSIG00000008407	SETDB1	94	53.988	Pelodiscus_sinensis
ENSIPUG00000004536	setdb1	93	72.626	ENSPEMG00000010553	Setdb1	89	72.067	Peromyscus_maniculatus_bairdii
ENSIPUG00000004536	setdb1	97	69.022	ENSPMAG00000001573	setdb1b	90	67.021	Petromyzon_marinus
ENSIPUG00000004536	setdb1	99	64.138	ENSPFOG00000004623	-	92	64.222	Poecilia_formosa
ENSIPUG00000004536	setdb1	100	73.085	ENSPFOG00000004429	setdb1b	98	69.356	Poecilia_formosa
ENSIPUG00000004536	setdb1	95	68.831	ENSPLAG00000017117	setdb1b	98	66.234	Poecilia_latipinna
ENSIPUG00000004536	setdb1	99	69.971	ENSPLAG00000019076	-	99	67.244	Poecilia_latipinna
ENSIPUG00000004536	setdb1	99	69.578	ENSPMEG00000006468	setdb1b	98	67.164	Poecilia_mexicana
ENSIPUG00000004536	setdb1	99	66.304	ENSPREG00000017459	setdb1b	98	66.928	Poecilia_reticulata
ENSIPUG00000004536	setdb1	98	72.067	ENSPPYG00000000887	SETDB1	89	65.842	Pongo_abelii
ENSIPUG00000004536	setdb1	81	60.990	ENSPCAG00000002527	SETDB1	88	57.008	Procavia_capensis
ENSIPUG00000004536	setdb1	98	72.989	ENSPCOG00000027869	SETDB1	87	72.989	Propithecus_coquereli
ENSIPUG00000004536	setdb1	96	61.494	ENSPVAG00000004355	SETDB1	85	61.494	Pteropus_vampyrus
ENSIPUG00000004536	setdb1	100	72.571	ENSPNYG00000003997	setdb1b	98	69.067	Pundamilia_nyererei
ENSIPUG00000004536	setdb1	98	41.634	ENSPNAG00000003444	setdb1a	71	81.443	Pygocentrus_nattereri
ENSIPUG00000004536	setdb1	100	83.907	ENSPNAG00000021617	setdb1b	100	81.906	Pygocentrus_nattereri
ENSIPUG00000004536	setdb1	98	72.626	ENSRNOG00000021143	Setdb1	87	72.067	Rattus_norvegicus
ENSIPUG00000004536	setdb1	98	72.067	ENSRBIG00000042359	SETDB1	89	65.842	Rhinopithecus_bieti
ENSIPUG00000004536	setdb1	98	72.067	ENSRROG00000032628	SETDB1	89	65.842	Rhinopithecus_roxellana
ENSIPUG00000004536	setdb1	88	72.067	ENSSBOG00000028608	SETDB1	89	65.842	Saimiri_boliviensis_boliviensis
ENSIPUG00000004536	setdb1	97	72.989	ENSSHAG00000012701	SETDB1	88	67.857	Sarcophilus_harrisii
ENSIPUG00000004536	setdb1	98	72.911	ENSSFOG00015022183	setdb1	99	71.585	Scleropages_formosus
ENSIPUG00000004536	setdb1	95	80.508	ENSSMAG00000015398	setdb1b	98	66.872	Scophthalmus_maximus
ENSIPUG00000004536	setdb1	98	71.792	ENSSDUG00000007513	setdb1b	98	69.451	Seriola_dumerili
ENSIPUG00000004536	setdb1	98	71.568	ENSSLDG00000015209	setdb1b	98	69.359	Seriola_lalandi_dorsalis
ENSIPUG00000004536	setdb1	97	62.392	ENSSPUG00000002969	SETDB1	95	56.447	Sphenodon_punctatus
ENSIPUG00000004536	setdb1	97	72.067	ENSSSCG00000006645	SETDB1	87	73.563	Sus_scrofa
ENSIPUG00000004536	setdb1	93	71.186	ENSTGUG00000004684	SETDB1	90	70.056	Taeniopygia_guttata
ENSIPUG00000004536	setdb1	96	71.385	ENSTRUG00000014641	setdb1b	98	68.108	Takifugu_rubripes
ENSIPUG00000004536	setdb1	95	64.777	ENSTNIG00000008065	setdb1b	97	60.870	Tetraodon_nigroviridis
ENSIPUG00000004536	setdb1	92	72.067	ENSTBEG00000009306	SETDB1	91	65.842	Tupaia_belangeri
ENSIPUG00000004536	setdb1	66	72.989	ENSTTRG00000006966	SETDB1	76	67.005	Tursiops_truncatus
ENSIPUG00000004536	setdb1	66	72.989	ENSUAMG00000026724	SETDB1	87	72.989	Ursus_americanus
ENSIPUG00000004536	setdb1	88	72.989	ENSUMAG00000003141	SETDB1	87	72.989	Ursus_maritimus
ENSIPUG00000004536	setdb1	74	65.265	ENSVPAG00000005440	SETDB1	73	58.199	Vicugna_pacos
ENSIPUG00000004536	setdb1	98	72.989	ENSVVUG00000011637	SETDB1	87	72.989	Vulpes_vulpes
ENSIPUG00000004536	setdb1	98	76.000	ENSXETG00000008936	setdb1	91	69.307	Xenopus_tropicalis
ENSIPUG00000004536	setdb1	98	77.778	ENSXCOG00000019497	setdb1b	89	77.778	Xiphophorus_couchianus
ENSIPUG00000004536	setdb1	99	69.875	ENSXMAG00000016600	setdb1b	98	66.798	Xiphophorus_maculatus