EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSIPUG00000004551 (Gene tree)
Gene ID
108256807
Gene Symbol
scrt1a
Alias
sb:eu669|zgc:172288
Full Name
transcriptional repressor scratch 1-like
Gene Type
protein_coding
Species
Ictalurus_punctatus
Status
putative
Strand
Plus strand
Length
3576 bases
Position
chr24:14898584-14902159
Accession
108256807
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSIPUP00000006564zf-C2H2PF00096.268.7e-2614
ENSIPUP00000006564zf-C2H2PF00096.268.7e-2624
ENSIPUP00000006564zf-C2H2PF00096.268.7e-2634
ENSIPUP00000006564zf-C2H2PF00096.268.7e-2644
ENSIPUP00000006564zf-metPF12874.71.5e-0811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSIPUT00000006854-2587XM_017454033ENSIPUP00000006564280 (aa)XP_017309522A0A2D0PU35
Gene Model
Click here to download ENSIPUG00000004551's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000004551's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSIPUG00000004551scrt1a5634.848ENSIPUG00000008581znf319b7934.848
ENSIPUG00000004551scrt1a5137.671ENSIPUG00000021556-8737.671
ENSIPUG00000004551scrt1a5934.314ENSIPUG00000011258-7734.014
ENSIPUG00000004551scrt1a5436.620ENSIPUG00000017575-5036.620
ENSIPUG00000004551scrt1a6134.091ENSIPUG00000023635-9338.060
ENSIPUG00000004551scrt1a5540.260ENSIPUG00000022751-9638.346
ENSIPUG00000004551scrt1a5336.364ENSIPUG00000005733-6636.364
ENSIPUG00000004551scrt1a5334.815ENSIPUG00000012830-7634.815
ENSIPUG00000004551scrt1a5436.364ENSIPUG00000021472-7236.364
ENSIPUG00000004551scrt1a7036.641ENSIPUG00000016009znf5968036.641
ENSIPUG00000004551scrt1a6333.824ENSIPUG00000003040zbtb47a7834.328
ENSIPUG00000004551scrt1a6038.636ENSIPUG00000015468-9038.636
ENSIPUG00000004551scrt1a5635.762ENSIPUG00000001248prdm56435.762
ENSIPUG00000004551scrt1a6444.000ENSIPUG00000004905znf2365544.000
ENSIPUG00000004551scrt1a9635.740ENSIPUG00000015844snai1b10036.177
ENSIPUG00000004551scrt1a9640.876ENSIPUG00000000131snai29841.606
ENSIPUG00000004551scrt1a5334.091ENSIPUG00000023761-5934.091
ENSIPUG00000004551scrt1a5235.652ENSIPUG00000021518-8634.951
ENSIPUG00000004551scrt1a5339.535ENSIPUG00000006936-7649.020
ENSIPUG00000004551scrt1a5044.444ENSIPUG00000023688-9538.462
ENSIPUG00000004551scrt1a5037.879ENSIPUG00000019205-6237.879
ENSIPUG00000004551scrt1a6333.824ENSIPUG00000011399zbtb47b8230.769
ENSIPUG00000004551scrt1a5936.170ENSIPUG00000015037znf7115036.170
ENSIPUG00000004551scrt1a5440.566ENSIPUG00000015177-5440.566
ENSIPUG00000004551scrt1a5345.333ENSIPUG00000021527-9145.333
ENSIPUG00000004551scrt1a5556.364ENSIPUG00000002075znf3415056.364
ENSIPUG00000004551scrt1a5636.641ENSIPUG00000021441-7936.641
ENSIPUG00000004551scrt1a6336.364ENSIPUG00000015233-6336.364
ENSIPUG00000004551scrt1a6141.176ENSIPUG00000011652znf6487638.889
ENSIPUG00000004551scrt1a5137.037ENSIPUG00000007076-9037.037
ENSIPUG00000004551scrt1a5337.879ENSIPUG00000006916-7637.879
ENSIPUG00000004551scrt1a5337.121ENSIPUG00000009750-7837.121
ENSIPUG00000004551scrt1a7535.032ENSIPUG00000022266ZNF1356935.032
ENSIPUG00000004551scrt1a9978.700ENSIPUG00000005547-9978.700
ENSIPUG00000004551scrt1a5037.879ENSIPUG00000016075-9537.879
ENSIPUG00000004551scrt1a5040.288ENSIPUG00000013315-9540.288
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSIPUG00000004551scrt1a9979.715ENSAPOG00000015197-9879.715Acanthochromis_polyacanthus
ENSIPUG00000004551scrt1a9985.663ENSAPOG00000009279scrt1b9985.663Acanthochromis_polyacanthus
ENSIPUG00000004551scrt1a9769.424ENSAPOG00000003680scrt29669.424Acanthochromis_polyacanthus
ENSIPUG00000004551scrt1a9978.644ENSACIG00000006586-9878.644Amphilophus_citrinellus
ENSIPUG00000004551scrt1a9758.882ENSACIG00000001296-9658.882Amphilophus_citrinellus
ENSIPUG00000004551scrt1a9982.562ENSACIG00000013613scrt1b9982.562Amphilophus_citrinellus
ENSIPUG00000004551scrt1a9768.345ENSACIG00000012604scrt29668.345Amphilophus_citrinellus
ENSIPUG00000004551scrt1a9977.966ENSAOCG00000023304-9877.966Amphiprion_ocellaris
ENSIPUG00000004551scrt1a9769.424ENSAOCG00000021557scrt29669.424Amphiprion_ocellaris
ENSIPUG00000004551scrt1a9985.663ENSAOCG00000003910scrt1b9985.663Amphiprion_ocellaris
ENSIPUG00000004551scrt1a9769.424ENSAPEG00000022558scrt29669.424Amphiprion_percula
ENSIPUG00000004551scrt1a9977.966ENSAPEG00000005677-9877.966Amphiprion_percula
ENSIPUG00000004551scrt1a9985.663ENSAPEG00000000869scrt1b9985.663Amphiprion_percula
ENSIPUG00000004551scrt1a9986.022ENSATEG00000002302scrt1b9986.022Anabas_testudineus
ENSIPUG00000004551scrt1a9756.825ENSATEG00000003195-9756.825Anabas_testudineus
ENSIPUG00000004551scrt1a9980.427ENSATEG00000011660-9880.427Anabas_testudineus
ENSIPUG00000004551scrt1a9765.273ENSATEG00000023998scrt29765.273Anabas_testudineus
ENSIPUG00000004551scrt1a7677.570ENSACAG00000016109SCRT29577.570Anolis_carolinensis
ENSIPUG00000004551scrt1a9976.510ENSACLG00000012046-9876.510Astatotilapia_calliptera
ENSIPUG00000004551scrt1a9985.305ENSACLG00000007162scrt1b9985.305Astatotilapia_calliptera
ENSIPUG00000004551scrt1a9990.217ENSAMXG00000038085scrt1a9890.217Astyanax_mexicanus
ENSIPUG00000004551scrt1a8371.548ENSAMXG00000034158scrt28771.548Astyanax_mexicanus
ENSIPUG00000004551scrt1a9982.734ENSAMXG00000042624SCRT19982.734Astyanax_mexicanus
ENSIPUG00000004551scrt1a5861.111WBGene00000468ces-16060.366Caenorhabditis_elegans
ENSIPUG00000004551scrt1a9986.331ENSCPBG00000018899SCRT19986.331Chrysemys_picta_bellii
ENSIPUG00000004551scrt1a8763.200ENSCPBG00000027613SCRT210063.200Chrysemys_picta_bellii
ENSIPUG00000004551scrt1a8848.996ENSCGRG00000001380Scrt210048.996Cricetulus_griseus_crigri
ENSIPUG00000004551scrt1a9766.885ENSCSEG00000021542scrt29766.885Cynoglossus_semilaevis
ENSIPUG00000004551scrt1a9985.305ENSCSEG00000008596scrt1b9985.305Cynoglossus_semilaevis
ENSIPUG00000004551scrt1a9976.610ENSCSEG00000014892-9876.610Cynoglossus_semilaevis
ENSIPUG00000004551scrt1a9978.305ENSCVAG00000003190-9878.305Cyprinodon_variegatus
ENSIPUG00000004551scrt1a9986.022ENSCVAG00000009561scrt1b9986.022Cyprinodon_variegatus
ENSIPUG00000004551scrt1a9764.952ENSCVAG00000021038scrt29764.952Cyprinodon_variegatus
ENSIPUG00000004551scrt1a9888.364ENSDARG00000040214scrt1b9888.364Danio_rerio
ENSIPUG00000004551scrt1a9990.647ENSDARG00000100821scrt1a9990.647Danio_rerio
ENSIPUG00000004551scrt1a9986.738ENSELUG00000005435scrt1b9986.738Esox_lucius
ENSIPUG00000004551scrt1a9989.493ENSELUG00000022228scrt1a9889.493Esox_lucius
ENSIPUG00000004551scrt1a9764.557ENSELUG00000023883scrt29664.444Esox_lucius
ENSIPUG00000004551scrt1a8371.245ENSFALG00000005718SCRT29771.245Ficedula_albicollis
ENSIPUG00000004551scrt1a9761.397ENSFDAG00000008733SCRT19761.397Fukomys_damarensis
ENSIPUG00000004551scrt1a9770.504ENSFHEG00000005732scrt29670.504Fundulus_heteroclitus
ENSIPUG00000004551scrt1a9986.022ENSFHEG00000014820scrt1b9986.022Fundulus_heteroclitus
ENSIPUG00000004551scrt1a9977.966ENSFHEG00000009794-9877.966Fundulus_heteroclitus
ENSIPUG00000004551scrt1a9983.813ENSGMOG00000000629scrt1b9983.813Gadus_morhua
ENSIPUG00000004551scrt1a5697.521ENSGMOG00000013833-5397.521Gadus_morhua
ENSIPUG00000004551scrt1a9760.772ENSGMOG00000019519scrt29660.772Gadus_morhua
ENSIPUG00000004551scrt1a9764.835ENSGALG00000028912SCRT29765.201Gallus_gallus
ENSIPUG00000004551scrt1a9979.286ENSGAFG00000009650-9879.286Gambusia_affinis
ENSIPUG00000004551scrt1a9985.663ENSGAFG00000007636scrt1b9985.663Gambusia_affinis
ENSIPUG00000004551scrt1a9767.677ENSGAFG00000003093scrt29767.677Gambusia_affinis
ENSIPUG00000004551scrt1a9982.671ENSGACG00000008982scrt1b9982.671Gasterosteus_aculeatus
ENSIPUG00000004551scrt1a9976.289ENSGACG00000004072-9876.289Gasterosteus_aculeatus
ENSIPUG00000004551scrt1a9985.971ENSGAGG00000011736SCRT110085.971Gopherus_agassizii
ENSIPUG00000004551scrt1a9667.159ENSGAGG00000020761SCRT29667.159Gopherus_agassizii
ENSIPUG00000004551scrt1a6382.386ENSGAGG00000020760-6882.386Gopherus_agassizii
ENSIPUG00000004551scrt1a9978.983ENSHBUG00000019101-9878.983Haplochromis_burtoni
ENSIPUG00000004551scrt1a9769.424ENSHBUG00000012492scrt29669.424Haplochromis_burtoni
ENSIPUG00000004551scrt1a9985.305ENSHBUG00000016621scrt1b9985.305Haplochromis_burtoni
ENSIPUG00000004551scrt1a9984.588ENSHCOG00000016704scrt1b9984.588Hippocampus_comes
ENSIPUG00000004551scrt1a9974.653ENSHCOG00000016179-9874.653Hippocampus_comes
ENSIPUG00000004551scrt1a9765.763ENSHCOG00000008116scrt29765.763Hippocampus_comes
ENSIPUG00000004551scrt1a5183.099ENSSTOG00000032944SCRT28180.795Ictidomys_tridecemlineatus
ENSIPUG00000004551scrt1a9976.689ENSKMAG00000009489-9877.365Kryptolebias_marmoratus
ENSIPUG00000004551scrt1a9986.380ENSKMAG00000005484scrt1b9986.380Kryptolebias_marmoratus
ENSIPUG00000004551scrt1a9765.595ENSKMAG00000018087scrt29765.595Kryptolebias_marmoratus
ENSIPUG00000004551scrt1a9765.495ENSLBEG00000015419scrt29764.744Labrus_bergylta
ENSIPUG00000004551scrt1a9977.211ENSLBEG00000023388-9877.891Labrus_bergylta
ENSIPUG00000004551scrt1a9985.612ENSLACG00000003588SCRT19985.612Latimeria_chalumnae
ENSIPUG00000004551scrt1a9755.627ENSLOCG00000002246scrt29755.627Lepisosteus_oculatus
ENSIPUG00000004551scrt1a9988.849ENSLOCG00000007573scrt1b9988.849Lepisosteus_oculatus
ENSIPUG00000004551scrt1a9691.111ENSMFAG00000035496SCRT17781.707Macaca_fascicularis
ENSIPUG00000004551scrt1a9985.663ENSMAMG00000011698scrt1b9985.663Mastacembelus_armatus
ENSIPUG00000004551scrt1a9765.595ENSMAMG00000001291scrt29765.595Mastacembelus_armatus
ENSIPUG00000004551scrt1a9769.424ENSMZEG00005026445scrt29669.424Maylandia_zebra
ENSIPUG00000004551scrt1a9978.983ENSMZEG00005026702-9878.983Maylandia_zebra
ENSIPUG00000004551scrt1a9985.305ENSMZEG00005005627scrt1b9985.305Maylandia_zebra
ENSIPUG00000004551scrt1a8368.966ENSMGAG00000016579SCRT29770.259Meleagris_gallopavo
ENSIPUG00000004551scrt1a9984.588ENSMMOG00000003327scrt1b9984.588Mola_mola
ENSIPUG00000004551scrt1a9978.983ENSMMOG00000018345-9878.983Mola_mola
ENSIPUG00000004551scrt1a9765.359ENSMMOG00000009272scrt29765.359Mola_mola
ENSIPUG00000004551scrt1a9767.986ENSMALG00000013656scrt29667.986Monopterus_albus
ENSIPUG00000004551scrt1a9986.022ENSMALG00000012704scrt1b9986.022Monopterus_albus
ENSIPUG00000004551scrt1a9651.292ENSNGAG00000020815Scrt29751.087Nannospalax_galili
ENSIPUG00000004551scrt1a9769.065ENSNBRG00000007221scrt29669.065Neolamprologus_brichardi
ENSIPUG00000004551scrt1a9978.644ENSNBRG00000014882-9878.644Neolamprologus_brichardi
ENSIPUG00000004551scrt1a9981.560ENSNBRG00000013983scrt1b9981.560Neolamprologus_brichardi
ENSIPUG00000004551scrt1a9985.305ENSONIG00000006007scrt1b9985.305Oreochromis_niloticus
ENSIPUG00000004551scrt1a9764.952ENSONIG00000016758scrt29764.952Oreochromis_niloticus
ENSIPUG00000004551scrt1a9774.183ENSONIG00000019809-10074.183Oreochromis_niloticus
ENSIPUG00000004551scrt1a9762.230ENSONIG00000003152-9662.230Oreochromis_niloticus
ENSIPUG00000004551scrt1a9764.952ENSORLG00000024051scrt29764.952Oryzias_latipes
ENSIPUG00000004551scrt1a9976.174ENSORLG00000022825-9876.174Oryzias_latipes
ENSIPUG00000004551scrt1a9985.305ENSORLG00000025651scrt1b9985.305Oryzias_latipes
ENSIPUG00000004551scrt1a9764.952ENSORLG00020011478scrt29764.952Oryzias_latipes_hni
ENSIPUG00000004551scrt1a9985.305ENSORLG00020012967scrt1b9985.305Oryzias_latipes_hni
ENSIPUG00000004551scrt1a9764.952ENSORLG00015005524scrt29764.952Oryzias_latipes_hsok
ENSIPUG00000004551scrt1a9985.305ENSORLG00015019165scrt1b9985.305Oryzias_latipes_hsok
ENSIPUG00000004551scrt1a9976.510ENSORLG00015010104-9876.510Oryzias_latipes_hsok
ENSIPUG00000004551scrt1a9765.273ENSOMEG00000002661scrt29765.273Oryzias_melastigma
ENSIPUG00000004551scrt1a9978.912ENSOMEG00000000286-9878.912Oryzias_melastigma
ENSIPUG00000004551scrt1a9985.305ENSOMEG00000003925scrt1b9985.305Oryzias_melastigma
ENSIPUG00000004551scrt1a9989.568ENSPKIG00000020085scrt1a9989.568Paramormyrops_kingsleyae
ENSIPUG00000004551scrt1a9987.410ENSPKIG00000022303SCRT19987.410Paramormyrops_kingsleyae
ENSIPUG00000004551scrt1a9978.621ENSPMGG00000021402-9878.621Periophthalmus_magnuspinnatus
ENSIPUG00000004551scrt1a9771.480ENSPMGG00000016561scrt29671.480Periophthalmus_magnuspinnatus
ENSIPUG00000004551scrt1a9983.513ENSPMGG00000002260scrt1b9983.513Periophthalmus_magnuspinnatus
ENSIPUG00000004551scrt1a9985.663ENSPFOG00000017719scrt1b9985.663Poecilia_formosa
ENSIPUG00000004551scrt1a9978.912ENSPFOG00000005616-9878.912Poecilia_formosa
ENSIPUG00000004551scrt1a9765.273ENSPFOG00000007738scrt29765.273Poecilia_formosa
ENSIPUG00000004551scrt1a9770.968ENSPLAG00000005765scrt29670.968Poecilia_latipinna
ENSIPUG00000004551scrt1a9985.663ENSPLAG00000009876scrt1b9985.663Poecilia_latipinna
ENSIPUG00000004551scrt1a9978.912ENSPLAG00000011718-9878.912Poecilia_latipinna
ENSIPUG00000004551scrt1a9985.663ENSPMEG00000013274scrt1b9985.663Poecilia_mexicana
ENSIPUG00000004551scrt1a9770.968ENSPMEG00000001538scrt29670.968Poecilia_mexicana
ENSIPUG00000004551scrt1a9978.912ENSPMEG00000011706-9878.912Poecilia_mexicana
ENSIPUG00000004551scrt1a9978.231ENSPREG00000012166-9878.231Poecilia_reticulata
ENSIPUG00000004551scrt1a9765.273ENSPREG00000001147scrt29765.273Poecilia_reticulata
ENSIPUG00000004551scrt1a9985.663ENSPREG00000018985scrt1b9985.663Poecilia_reticulata
ENSIPUG00000004551scrt1a9978.983ENSPNYG00000008865-9878.983Pundamilia_nyererei
ENSIPUG00000004551scrt1a9985.305ENSPNYG00000017733scrt1b9985.305Pundamilia_nyererei
ENSIPUG00000004551scrt1a9769.424ENSPNYG00000013109scrt29669.424Pundamilia_nyererei
ENSIPUG00000004551scrt1a9983.394ENSPNAG00000027880-9983.394Pygocentrus_nattereri
ENSIPUG00000004551scrt1a9992.029ENSPNAG00000017415scrt1a9892.029Pygocentrus_nattereri
ENSIPUG00000004551scrt1a9987.410ENSSFOG00015001195SCRT19987.410Scleropages_formosus
ENSIPUG00000004551scrt1a9976.094ENSSMAG00000005122-9876.094Scophthalmus_maximus
ENSIPUG00000004551scrt1a9984.946ENSSMAG00000019207scrt1b9984.946Scophthalmus_maximus
ENSIPUG00000004551scrt1a9986.380ENSSDUG00000007752scrt1b9986.380Seriola_dumerili
ENSIPUG00000004551scrt1a9865.552ENSSDUG00000001637scrt29665.886Seriola_dumerili
ENSIPUG00000004551scrt1a9978.644ENSSDUG00000013215-9878.644Seriola_dumerili
ENSIPUG00000004551scrt1a9978.644ENSSLDG00000016454-9878.644Seriola_lalandi_dorsalis
ENSIPUG00000004551scrt1a9764.630ENSSLDG00000013565scrt29764.952Seriola_lalandi_dorsalis
ENSIPUG00000004551scrt1a9986.380ENSSLDG00000017166scrt1b9986.380Seriola_lalandi_dorsalis
ENSIPUG00000004551scrt1a9765.714ENSSPUG00000018637SCRT29765.714Sphenodon_punctatus
ENSIPUG00000004551scrt1a9769.784ENSSPAG00000014018scrt29669.784Stegastes_partitus
ENSIPUG00000004551scrt1a9986.380ENSSPAG00000002200scrt1b9986.380Stegastes_partitus
ENSIPUG00000004551scrt1a9977.288ENSSPAG00000006788-9877.966Stegastes_partitus
ENSIPUG00000004551scrt1a8371.121ENSTGUG00000006801SCRT29971.121Taeniopygia_guttata
ENSIPUG00000004551scrt1a8577.959ENSTRUG00000019558-8077.959Takifugu_rubripes
ENSIPUG00000004551scrt1a9978.840ENSTRUG00000012719-9878.840Takifugu_rubripes
ENSIPUG00000004551scrt1a9767.918ENSTRUG00000007620scrt29767.918Takifugu_rubripes
ENSIPUG00000004551scrt1a9985.560ENSTRUG00000011637scrt1b9985.560Takifugu_rubripes
ENSIPUG00000004551scrt1a9985.305ENSTNIG00000018384scrt1b9985.305Tetraodon_nigroviridis
ENSIPUG00000004551scrt1a9771.174ENSTNIG00000012473scrt29771.174Tetraodon_nigroviridis
ENSIPUG00000004551scrt1a9985.305ENSXCOG00000019675scrt1b9985.305Xiphophorus_couchianus
ENSIPUG00000004551scrt1a9977.857ENSXCOG00000019861-9877.857Xiphophorus_couchianus
ENSIPUG00000004551scrt1a9768.013ENSXCOG00000014367scrt29768.013Xiphophorus_couchianus
ENSIPUG00000004551scrt1a9985.305ENSXMAG00000027885scrt1b9985.305Xiphophorus_maculatus
ENSIPUG00000004551scrt1a9978.571ENSXMAG00000015353-9878.571Xiphophorus_maculatus
ENSIPUG00000004551scrt1a9765.595ENSXMAG00000028567scrt29765.595Xiphophorus_maculatus

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