EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000004603 (Gene tree)
Gene ID: 108258807
Gene Symbol: Ehd3
Alias: si:ch211-147c1.2
Full Name: EH domain-containing protein 3
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 18074 bases
Position: chr2:29768004-29786077
Accession: 108258807
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000006672	MMR_HSR1	PF01926.23	1.5e-08	1	1
ENSIPUP00000006677	MMR_HSR1	PF01926.23	1.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000006966	-	3340	-	ENSIPUP00000006672	535 (aa)	-	W5ULH4
ENSIPUT00000006971	-	3064	XM_017457748	ENSIPUP00000006677	535 (aa)	XP_017313237	W5ULH4

Gene Model

Click here to download ENSIPUG00000004603's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000004603's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000004603	Ehd3	99	84.557	ENSIPUG00000017390	EHD1	99	84.557
ENSIPUG00000004603	Ehd3	70	31.282	ENSIPUG00000011609	SRL	81	31.536
ENSIPUG00000004603	Ehd3	99	74.393	ENSIPUG00000018207	ehd4	98	74.393
ENSIPUG00000004603	Ehd3	97	70.644	ENSIPUG00000000204	Ehd2	97	70.644
ENSIPUG00000004603	Ehd3	74	32.039	ENSIPUG00000012513	srl	85	32.412
ENSIPUG00000004603	Ehd3	99	84.557	ENSIPUG00000002819	ehd1a	99	84.557
ENSIPUG00000004603	Ehd3	96	65.010	ENSIPUG00000024057	ehd2a	95	65.010

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000004603	Ehd3	100	91.215	ENSG00000013016	EHD3	100	91.215	Homo_sapiens
ENSIPUG00000004603	Ehd3	100	91.215	ENSAMEG00000004282	EHD3	100	91.215	Ailuropoda_melanoleuca
ENSIPUG00000004603	Ehd3	100	94.579	ENSACIG00000015462	ehd3	100	94.579	Amphilophus_citrinellus
ENSIPUG00000004603	Ehd3	100	80.561	ENSAOCG00000001953	-	100	80.748	Amphiprion_ocellaris
ENSIPUG00000004603	Ehd3	100	94.579	ENSAPEG00000018380	ehd3	100	94.579	Amphiprion_percula
ENSIPUG00000004603	Ehd3	100	94.393	ENSATEG00000002224	ehd3	100	94.393	Anabas_testudineus
ENSIPUG00000004603	Ehd3	100	91.963	ENSAPLG00000010467	EHD3	100	91.963	Anas_platyrhynchos
ENSIPUG00000004603	Ehd3	100	87.850	ENSACAG00000007103	EHD3	100	87.850	Anolis_carolinensis
ENSIPUG00000004603	Ehd3	100	91.215	ENSANAG00000020422	EHD3	100	91.215	Aotus_nancymaae
ENSIPUG00000004603	Ehd3	100	94.766	ENSACLG00000007581	ehd3	100	94.766	Astatotilapia_calliptera
ENSIPUG00000004603	Ehd3	100	91.501	ENSAMXG00000042972	ehd3	100	91.501	Astyanax_mexicanus
ENSIPUG00000004603	Ehd3	100	90.467	ENSBTAG00000001662	EHD3	100	90.467	Bos_taurus
ENSIPUG00000004603	Ehd3	100	91.402	ENSCJAG00000003137	EHD3	100	91.402	Callithrix_jacchus
ENSIPUG00000004603	Ehd3	100	91.402	ENSCAFG00000005348	EHD3	100	91.402	Canis_familiaris
ENSIPUG00000004603	Ehd3	99	88.722	ENSCAFG00020023684	EHD3	98	88.722	Canis_lupus_dingo
ENSIPUG00000004603	Ehd3	100	90.467	ENSCHIG00000017794	EHD3	100	90.467	Capra_hircus
ENSIPUG00000004603	Ehd3	100	91.028	ENSTSYG00000036583	EHD3	100	91.028	Carlito_syrichta
ENSIPUG00000004603	Ehd3	100	91.589	ENSCPOG00000034108	EHD3	100	91.589	Cavia_porcellus
ENSIPUG00000004603	Ehd3	100	91.402	ENSCCAG00000029860	EHD3	100	91.402	Cebus_capucinus
ENSIPUG00000004603	Ehd3	100	91.402	ENSCATG00000044604	EHD3	100	91.402	Cercocebus_atys
ENSIPUG00000004603	Ehd3	100	91.589	ENSCLAG00000010983	EHD3	100	91.589	Chinchilla_lanigera
ENSIPUG00000004603	Ehd3	100	91.402	ENSCSAG00000011254	EHD3	100	91.402	Chlorocebus_sabaeus
ENSIPUG00000004603	Ehd3	100	92.150	ENSCPBG00000011884	EHD3	100	92.150	Chrysemys_picta_bellii
ENSIPUG00000004603	Ehd3	100	91.402	ENSCANG00000024283	EHD3	100	91.402	Colobus_angolensis_palliatus
ENSIPUG00000004603	Ehd3	100	91.402	ENSCGRG00001020979	Ehd3	100	91.402	Cricetulus_griseus_chok1gshd
ENSIPUG00000004603	Ehd3	100	91.402	ENSCGRG00000013157	Ehd3	100	91.402	Cricetulus_griseus_crigri
ENSIPUG00000004603	Ehd3	100	93.271	ENSCSEG00000019195	ehd3	100	93.271	Cynoglossus_semilaevis
ENSIPUG00000004603	Ehd3	100	94.579	ENSCVAG00000016197	ehd3	100	94.579	Cyprinodon_variegatus
ENSIPUG00000004603	Ehd3	100	96.636	ENSDARG00000007869	ehd3	100	96.636	Danio_rerio
ENSIPUG00000004603	Ehd3	100	91.028	ENSDNOG00000039339	EHD3	100	91.028	Dasypus_novemcinctus
ENSIPUG00000004603	Ehd3	100	91.028	ENSDORG00000024162	Ehd3	100	91.028	Dipodomys_ordii
ENSIPUG00000004603	Ehd3	99	87.547	ENSETEG00000013323	EHD3	98	87.547	Echinops_telfairi
ENSIPUG00000004603	Ehd3	100	91.402	ENSEASG00005008635	EHD3	100	91.402	Equus_asinus_asinus
ENSIPUG00000004603	Ehd3	100	91.402	ENSECAG00000015195	EHD3	100	91.402	Equus_caballus
ENSIPUG00000004603	Ehd3	88	91.286	ENSEEUG00000010447	EHD3	86	91.286	Erinaceus_europaeus
ENSIPUG00000004603	Ehd3	99	95.131	ENSELUG00000023984	ehd3	99	95.131	Esox_lucius
ENSIPUG00000004603	Ehd3	100	91.589	ENSFCAG00000029627	EHD3	100	91.589	Felis_catus
ENSIPUG00000004603	Ehd3	100	91.589	ENSFALG00000011448	EHD3	100	91.589	Ficedula_albicollis
ENSIPUG00000004603	Ehd3	100	91.589	ENSFDAG00000017946	EHD3	100	91.589	Fukomys_damarensis
ENSIPUG00000004603	Ehd3	100	94.019	ENSFHEG00000018572	ehd3	100	94.019	Fundulus_heteroclitus
ENSIPUG00000004603	Ehd3	99	92.120	ENSGMOG00000006447	ehd3	99	92.120	Gadus_morhua
ENSIPUG00000004603	Ehd3	100	92.150	ENSGALG00000009086	EHD3	100	92.150	Gallus_gallus
ENSIPUG00000004603	Ehd3	100	94.019	ENSGAFG00000005665	ehd3	100	94.019	Gambusia_affinis
ENSIPUG00000004603	Ehd3	99	93.621	ENSGACG00000013160	ehd3	96	93.621	Gasterosteus_aculeatus
ENSIPUG00000004603	Ehd3	100	92.150	ENSGAGG00000024938	EHD3	100	92.150	Gopherus_agassizii
ENSIPUG00000004603	Ehd3	100	91.402	ENSGGOG00000003031	EHD3	100	91.402	Gorilla_gorilla
ENSIPUG00000004603	Ehd3	100	94.766	ENSHBUG00000023210	ehd3	100	94.766	Haplochromis_burtoni
ENSIPUG00000004603	Ehd3	100	91.776	ENSHGLG00000014803	EHD3	100	91.776	Heterocephalus_glaber_female
ENSIPUG00000004603	Ehd3	100	91.776	ENSHGLG00100011636	EHD3	100	91.776	Heterocephalus_glaber_male
ENSIPUG00000004603	Ehd3	100	93.458	ENSHCOG00000018418	ehd3	100	93.458	Hippocampus_comes
ENSIPUG00000004603	Ehd3	100	91.028	ENSSTOG00000028279	EHD3	100	91.028	Ictidomys_tridecemlineatus
ENSIPUG00000004603	Ehd3	100	91.589	ENSJJAG00000013415	Ehd3	100	91.589	Jaculus_jaculus
ENSIPUG00000004603	Ehd3	100	93.645	ENSKMAG00000018498	ehd3	100	93.645	Kryptolebias_marmoratus
ENSIPUG00000004603	Ehd3	100	93.832	ENSLBEG00000009464	ehd3	100	93.832	Labrus_bergylta
ENSIPUG00000004603	Ehd3	100	94.206	ENSLOCG00000016786	ehd3	100	94.206	Lepisosteus_oculatus
ENSIPUG00000004603	Ehd3	99	90.432	ENSLAFG00000016215	EHD3	96	90.432	Loxodonta_africana
ENSIPUG00000004603	Ehd3	100	91.028	ENSMFAG00000033132	EHD3	100	91.028	Macaca_fascicularis
ENSIPUG00000004603	Ehd3	100	91.028	ENSMMUG00000003476	EHD3	100	91.028	Macaca_mulatta
ENSIPUG00000004603	Ehd3	100	91.028	ENSMNEG00000041202	EHD3	100	91.028	Macaca_nemestrina
ENSIPUG00000004603	Ehd3	100	91.402	ENSMLEG00000023912	EHD3	100	91.402	Mandrillus_leucophaeus
ENSIPUG00000004603	Ehd3	100	94.393	ENSMAMG00000014744	ehd3	100	94.393	Mastacembelus_armatus
ENSIPUG00000004603	Ehd3	100	94.766	ENSMZEG00005012558	ehd3	100	94.766	Maylandia_zebra
ENSIPUG00000004603	Ehd3	100	91.589	ENSMAUG00000013239	Ehd3	100	91.589	Mesocricetus_auratus
ENSIPUG00000004603	Ehd3	100	89.720	ENSMICG00000043744	EHD3	100	89.720	Microcebus_murinus
ENSIPUG00000004603	Ehd3	100	91.402	ENSMOCG00000012572	Ehd3	100	91.402	Microtus_ochrogaster
ENSIPUG00000004603	Ehd3	100	80.000	ENSMMOG00000015157	ehd3	100	80.187	Mola_mola
ENSIPUG00000004603	Ehd3	100	92.336	ENSMODG00000015505	EHD3	100	92.336	Monodelphis_domestica
ENSIPUG00000004603	Ehd3	100	94.206	ENSMALG00000015586	ehd3	100	94.206	Monopterus_albus
ENSIPUG00000004603	Ehd3	100	91.589	MGP_CAROLIEiJ_G0021870	Ehd3	100	91.589	Mus_caroli
ENSIPUG00000004603	Ehd3	100	91.589	ENSMUSG00000024065	Ehd3	100	91.589	Mus_musculus
ENSIPUG00000004603	Ehd3	100	91.402	MGP_PahariEiJ_G0020857	Ehd3	100	91.402	Mus_pahari
ENSIPUG00000004603	Ehd3	100	91.402	MGP_SPRETEiJ_G0022782	Ehd3	100	91.402	Mus_spretus
ENSIPUG00000004603	Ehd3	89	91.807	ENSMPUG00000005148	EHD3	100	91.807	Mustela_putorius_furo
ENSIPUG00000004603	Ehd3	100	87.850	ENSMLUG00000008050	EHD3	100	87.850	Myotis_lucifugus
ENSIPUG00000004603	Ehd3	100	91.402	ENSNGAG00000014439	Ehd3	100	91.402	Nannospalax_galili
ENSIPUG00000004603	Ehd3	100	94.766	ENSNBRG00000022653	ehd3	100	94.766	Neolamprologus_brichardi
ENSIPUG00000004603	Ehd3	89	91.423	ENSNLEG00000015546	EHD3	100	91.423	Nomascus_leucogenys
ENSIPUG00000004603	Ehd3	100	90.093	ENSOPRG00000012242	EHD3	98	90.093	Ochotona_princeps
ENSIPUG00000004603	Ehd3	100	91.963	ENSODEG00000008117	EHD3	100	91.963	Octodon_degus
ENSIPUG00000004603	Ehd3	100	94.953	ENSONIG00000000693	ehd3	100	94.953	Oreochromis_niloticus
ENSIPUG00000004603	Ehd3	100	91.418	ENSOCUG00000001228	EHD3	100	91.418	Oryctolagus_cuniculus
ENSIPUG00000004603	Ehd3	100	93.271	ENSORLG00000017118	ehd3	100	93.271	Oryzias_latipes
ENSIPUG00000004603	Ehd3	100	93.271	ENSORLG00020002121	ehd3	100	93.271	Oryzias_latipes_hni
ENSIPUG00000004603	Ehd3	100	93.271	ENSORLG00015020550	ehd3	100	93.271	Oryzias_latipes_hsok
ENSIPUG00000004603	Ehd3	100	94.206	ENSOMEG00000000506	ehd3	100	94.206	Oryzias_melastigma
ENSIPUG00000004603	Ehd3	100	90.654	ENSOGAG00000000397	EHD3	100	90.654	Otolemur_garnettii
ENSIPUG00000004603	Ehd3	100	87.664	ENSOARG00000019698	EHD3	100	89.159	Ovis_aries
ENSIPUG00000004603	Ehd3	100	91.402	ENSPPAG00000035288	EHD3	100	91.402	Pan_paniscus
ENSIPUG00000004603	Ehd3	100	91.402	ENSPPRG00000002225	EHD3	100	91.402	Panthera_pardus
ENSIPUG00000004603	Ehd3	100	91.589	ENSPTIG00000013343	EHD3	100	91.589	Panthera_tigris_altaica
ENSIPUG00000004603	Ehd3	100	91.402	ENSPTRG00000011805	EHD3	100	91.402	Pan_troglodytes
ENSIPUG00000004603	Ehd3	100	91.402	ENSPANG00000023120	EHD3	100	91.402	Papio_anubis
ENSIPUG00000004603	Ehd3	100	95.888	ENSPKIG00000001422	ehd3	100	95.888	Paramormyrops_kingsleyae
ENSIPUG00000004603	Ehd3	100	91.963	ENSPSIG00000017757	EHD3	100	91.963	Pelodiscus_sinensis
ENSIPUG00000004603	Ehd3	100	93.458	ENSPMGG00000007882	ehd3	100	93.458	Periophthalmus_magnuspinnatus
ENSIPUG00000004603	Ehd3	100	91.963	ENSPCIG00000008811	EHD3	100	91.963	Phascolarctos_cinereus
ENSIPUG00000004603	Ehd3	100	94.393	ENSPFOG00000010935	ehd3	100	94.393	Poecilia_formosa
ENSIPUG00000004603	Ehd3	100	94.206	ENSPLAG00000001005	ehd3	100	94.206	Poecilia_latipinna
ENSIPUG00000004603	Ehd3	100	94.393	ENSPMEG00000006514	ehd3	100	94.393	Poecilia_mexicana
ENSIPUG00000004603	Ehd3	100	94.579	ENSPREG00000012884	ehd3	100	94.579	Poecilia_reticulata
ENSIPUG00000004603	Ehd3	100	91.589	ENSPPYG00000012514	EHD3	100	91.589	Pongo_abelii
ENSIPUG00000004603	Ehd3	89	89.958	ENSPCAG00000008166	EHD3	100	89.958	Procavia_capensis
ENSIPUG00000004603	Ehd3	100	90.280	ENSPCOG00000013548	EHD3	100	90.280	Propithecus_coquereli
ENSIPUG00000004603	Ehd3	98	91.379	ENSPVAG00000002680	EHD3	100	91.379	Pteropus_vampyrus
ENSIPUG00000004603	Ehd3	100	94.766	ENSPNYG00000003812	ehd3	100	94.766	Pundamilia_nyererei
ENSIPUG00000004603	Ehd3	100	97.757	ENSPNAG00000028984	ehd3	100	97.757	Pygocentrus_nattereri
ENSIPUG00000004603	Ehd3	100	91.963	ENSRNOG00000007744	Ehd3	100	91.963	Rattus_norvegicus
ENSIPUG00000004603	Ehd3	99	91.714	ENSRBIG00000033877	EHD3	100	86.551	Rhinopithecus_bieti
ENSIPUG00000004603	Ehd3	100	91.402	ENSRROG00000045782	EHD3	100	91.402	Rhinopithecus_roxellana
ENSIPUG00000004603	Ehd3	100	91.402	ENSSBOG00000030935	EHD3	100	91.402	Saimiri_boliviensis_boliviensis
ENSIPUG00000004603	Ehd3	100	91.963	ENSSHAG00000013011	EHD3	100	91.963	Sarcophilus_harrisii
ENSIPUG00000004603	Ehd3	100	95.327	ENSSFOG00015014110	ehd3	100	95.327	Scleropages_formosus
ENSIPUG00000004603	Ehd3	100	93.645	ENSSMAG00000008537	ehd3	100	93.645	Scophthalmus_maximus
ENSIPUG00000004603	Ehd3	100	94.579	ENSSDUG00000010820	ehd3	100	94.579	Seriola_dumerili
ENSIPUG00000004603	Ehd3	100	92.897	ENSSLDG00000025510	ehd3	100	92.897	Seriola_lalandi_dorsalis
ENSIPUG00000004603	Ehd3	99	92.683	ENSSPUG00000014730	EHD3	99	92.683	Sphenodon_punctatus
ENSIPUG00000004603	Ehd3	100	94.206	ENSSPAG00000013275	ehd3	100	94.206	Stegastes_partitus
ENSIPUG00000004603	Ehd3	100	91.028	ENSSSCG00000035987	EHD3	100	91.028	Sus_scrofa
ENSIPUG00000004603	Ehd3	100	89.925	ENSTGUG00000004572	EHD3	100	89.925	Taeniopygia_guttata
ENSIPUG00000004603	Ehd3	100	94.019	ENSTRUG00000014338	ehd3	100	94.019	Takifugu_rubripes
ENSIPUG00000004603	Ehd3	99	94.007	ENSTNIG00000010948	ehd3	99	94.007	Tetraodon_nigroviridis
ENSIPUG00000004603	Ehd3	99	89.831	ENSTBEG00000010371	EHD3	97	89.831	Tupaia_belangeri
ENSIPUG00000004603	Ehd3	100	86.916	ENSTTRG00000000167	EHD3	100	86.916	Tursiops_truncatus
ENSIPUG00000004603	Ehd3	100	91.589	ENSUAMG00000022243	EHD3	100	91.589	Ursus_americanus
ENSIPUG00000004603	Ehd3	99	91.011	ENSUMAG00000019931	EHD3	100	91.213	Ursus_maritimus
ENSIPUG00000004603	Ehd3	100	91.402	ENSVVUG00000007563	EHD3	98	91.402	Vulpes_vulpes
ENSIPUG00000004603	Ehd3	100	92.150	ENSXETG00000022070	ehd3	100	92.150	Xenopus_tropicalis
ENSIPUG00000004603	Ehd3	100	94.393	ENSXMAG00000025261	ehd3	100	94.393	Xiphophorus_maculatus