EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000004618 (Gene tree)
Gene ID: 108277918
Gene Symbol: tsr1
Alias: fc52b09|wu:fc52b09|zgc:123319
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 12382 bases
Position: chr17:16046225-16058606
Accession: 108277918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000006730	AARP2CN	PF08142.12	2e-21	1	1
ENSIPUP00000006741	AARP2CN	PF08142.12	2.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000007037	-	2511	XM_017490974	ENSIPUP00000006741	836 (aa)	XP_017346463	W5U808
ENSIPUT00000007026	-	2541	-	ENSIPUP00000006730	846 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000004618's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000004618's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000004618	tsr1	98	54.823	ENSG00000167721	TSR1	98	54.090	Homo_sapiens
ENSIPUG00000004618	tsr1	100	75.238	ENSAPOG00000020891	tsr1	100	75.357	Acanthochromis_polyacanthus
ENSIPUG00000004618	tsr1	99	55.396	ENSAMEG00000007599	TSR1	99	53.302	Ailuropoda_melanoleuca
ENSIPUG00000004618	tsr1	100	72.967	ENSACIG00000007090	tsr1	100	72.847	Amphilophus_citrinellus
ENSIPUG00000004618	tsr1	100	75.388	ENSAOCG00000023284	tsr1	100	75.388	Amphiprion_ocellaris
ENSIPUG00000004618	tsr1	93	75.256	ENSAPEG00000008452	tsr1	100	75.256	Amphiprion_percula
ENSIPUG00000004618	tsr1	100	75.118	ENSATEG00000021961	tsr1	100	73.939	Anabas_testudineus
ENSIPUG00000004618	tsr1	91	57.853	ENSAPLG00000013422	TSR1	100	57.516	Anas_platyrhynchos
ENSIPUG00000004618	tsr1	72	48.344	ENSACAG00000000859	TSR1	93	46.766	Anolis_carolinensis
ENSIPUG00000004618	tsr1	98	55.218	ENSANAG00000031071	TSR1	98	54.823	Aotus_nancymaae
ENSIPUG00000004618	tsr1	100	74.552	ENSACLG00000007595	tsr1	99	74.313	Astatotilapia_calliptera
ENSIPUG00000004618	tsr1	50	79.669	ENSAMXG00000008470	tsr1	89	79.433	Astyanax_mexicanus
ENSIPUG00000004618	tsr1	99	56.558	ENSBTAG00000004225	TSR1	99	55.663	Bos_taurus
ENSIPUG00000004618	tsr1	97	54.623	ENSCJAG00000012456	TSR1	98	54.100	Callithrix_jacchus
ENSIPUG00000004618	tsr1	99	55.663	ENSCAFG00000002106	-	99	54.819	Canis_familiaris
ENSIPUG00000004618	tsr1	89	53.191	ENSCAFG00000019273	-	100	56.388	Canis_familiaris
ENSIPUG00000004618	tsr1	99	55.422	ENSCAFG00020009728	TSR1	99	54.578	Canis_lupus_dingo
ENSIPUG00000004618	tsr1	99	56.318	ENSCHIG00000023935	TSR1	99	55.422	Capra_hircus
ENSIPUG00000004618	tsr1	99	55.475	ENSTSYG00000005468	TSR1	99	54.337	Carlito_syrichta
ENSIPUG00000004618	tsr1	92	54.404	ENSCPOG00000014833	TSR1	99	53.756	Cavia_porcellus
ENSIPUG00000004618	tsr1	92	53.668	ENSCCAG00000028962	TSR1	98	52.979	Cebus_capucinus
ENSIPUG00000004618	tsr1	98	54.964	ENSCATG00000044262	TSR1	98	54.579	Cercocebus_atys
ENSIPUG00000004618	tsr1	99	55.783	ENSCLAG00000005567	TSR1	99	54.699	Chinchilla_lanigera
ENSIPUG00000004618	tsr1	98	55.085	ENSCSAG00000013788	TSR1	98	54.701	Chlorocebus_sabaeus
ENSIPUG00000004618	tsr1	98	56.295	ENSCPBG00000020363	TSR1	98	56.109	Chrysemys_picta_bellii
ENSIPUG00000004618	tsr1	96	45.244	ENSCING00000020658	-	99	44.485	Ciona_intestinalis
ENSIPUG00000004618	tsr1	96	43.665	ENSCSAVG00000001875	-	100	41.995	Ciona_savignyi
ENSIPUG00000004618	tsr1	98	50.796	ENSCANG00000033056	TSR1	95	70.270	Colobus_angolensis_palliatus
ENSIPUG00000004618	tsr1	99	55.329	ENSCGRG00001023942	Tsr1	99	54.611	Cricetulus_griseus_chok1gshd
ENSIPUG00000004618	tsr1	99	52.295	ENSCGRG00000013015	Tsr1	51	49.361	Cricetulus_griseus_crigri
ENSIPUG00000004618	tsr1	100	71.326	ENSCSEG00000013009	tsr1	100	71.326	Cynoglossus_semilaevis
ENSIPUG00000004618	tsr1	99	73.501	ENSCVAG00000000506	tsr1	99	72.782	Cyprinodon_variegatus
ENSIPUG00000004618	tsr1	99	78.292	ENSDARG00000007744	tsr1	99	77.817	Danio_rerio
ENSIPUG00000004618	tsr1	99	56.799	ENSDNOG00000004715	TSR1	99	57.365	Dasypus_novemcinctus
ENSIPUG00000004618	tsr1	99	54.337	ENSDORG00000016371	-	99	53.782	Dipodomys_ordii
ENSIPUG00000004618	tsr1	96	43.260	FBgn0037073	Tsr1	96	42.597	Drosophila_melanogaster
ENSIPUG00000004618	tsr1	86	68.852	ENSETEG00000017534	TSR1	88	67.869	Echinops_telfairi
ENSIPUG00000004618	tsr1	95	51.119	ENSEBUG00000013731	TSR1	98	50.746	Eptatretus_burgeri
ENSIPUG00000004618	tsr1	99	56.197	ENSEASG00005009302	TSR1	97	55.301	Equus_asinus_asinus
ENSIPUG00000004618	tsr1	99	56.077	ENSECAG00000009114	TSR1	99	55.181	Equus_caballus
ENSIPUG00000004618	tsr1	100	73.365	ENSELUG00000020984	tsr1	96	73.127	Esox_lucius
ENSIPUG00000004618	tsr1	99	55.409	ENSFCAG00000006313	TSR1	99	54.688	Felis_catus
ENSIPUG00000004618	tsr1	99	58.463	ENSFALG00000006532	TSR1	99	58.014	Ficedula_albicollis
ENSIPUG00000004618	tsr1	99	54.699	ENSFDAG00000006038	TSR1	99	54.162	Fukomys_damarensis
ENSIPUG00000004618	tsr1	100	73.095	ENSFHEG00000003626	tsr1	99	72.381	Fundulus_heteroclitus
ENSIPUG00000004618	tsr1	100	68.301	ENSGMOG00000010336	tsr1	100	67.703	Gadus_morhua
ENSIPUG00000004618	tsr1	100	73.389	ENSGAFG00000012993	tsr1	99	73.508	Gambusia_affinis
ENSIPUG00000004618	tsr1	100	71.667	ENSGACG00000010843	tsr1	100	70.764	Gasterosteus_aculeatus
ENSIPUG00000004618	tsr1	98	56.295	ENSGAGG00000025619	-	99	55.582	Gopherus_agassizii
ENSIPUG00000004618	tsr1	98	55.067	ENSGGOG00000001704	TSR1	98	54.212	Gorilla_gorilla
ENSIPUG00000004618	tsr1	100	74.671	ENSHBUG00000017904	tsr1	100	74.487	Haplochromis_burtoni
ENSIPUG00000004618	tsr1	99	55.355	ENSHGLG00000012806	-	99	54.458	Heterocephalus_glaber_female
ENSIPUG00000004618	tsr1	96	49.068	ENSHGLG00000015688	-	98	47.453	Heterocephalus_glaber_female
ENSIPUG00000004618	tsr1	99	55.355	ENSHGLG00100015392	TSR1	99	54.458	Heterocephalus_glaber_male
ENSIPUG00000004618	tsr1	100	73.238	ENSHCOG00000001432	tsr1	100	72.488	Hippocampus_comes
ENSIPUG00000004618	tsr1	99	55.301	ENSSTOG00000011819	TSR1	99	54.819	Ictidomys_tridecemlineatus
ENSIPUG00000004618	tsr1	90	52.840	ENSJJAG00000019505	Tsr1	94	50.991	Jaculus_jaculus
ENSIPUG00000004618	tsr1	100	73.596	ENSKMAG00000005763	tsr1	99	73.596	Kryptolebias_marmoratus
ENSIPUG00000004618	tsr1	100	74.167	ENSLBEG00000021823	tsr1	99	74.762	Labrus_bergylta
ENSIPUG00000004618	tsr1	100	58.432	ENSLACG00000002197	TSR1	100	57.362	Latimeria_chalumnae
ENSIPUG00000004618	tsr1	91	77.333	ENSLOCG00000006491	TSR1	98	77.333	Lepisosteus_oculatus
ENSIPUG00000004618	tsr1	98	55.206	ENSMFAG00000021330	TSR1	98	54.823	Macaca_fascicularis
ENSIPUG00000004618	tsr1	98	55.085	ENSMMUG00000017519	TSR1	98	54.701	Macaca_mulatta
ENSIPUG00000004618	tsr1	98	54.964	ENSMNEG00000031382	TSR1	98	54.579	Macaca_nemestrina
ENSIPUG00000004618	tsr1	98	54.843	ENSMLEG00000036733	TSR1	98	54.457	Mandrillus_leucophaeus
ENSIPUG00000004618	tsr1	100	73.815	ENSMAMG00000017918	tsr1	99	74.171	Mastacembelus_armatus
ENSIPUG00000004618	tsr1	100	74.524	ENSMZEG00005007477	tsr1	100	74.524	Maylandia_zebra
ENSIPUG00000004618	tsr1	99	57.040	ENSMGAG00000005576	TSR1	99	56.595	Meleagris_gallopavo
ENSIPUG00000004618	tsr1	99	56.280	ENSMICG00000012943	TSR1	99	55.676	Microcebus_murinus
ENSIPUG00000004618	tsr1	99	54.327	ENSMOCG00000022764	Tsr1	99	53.365	Microtus_ochrogaster
ENSIPUG00000004618	tsr1	100	73.866	ENSMMOG00000014280	tsr1	100	73.866	Mola_mola
ENSIPUG00000004618	tsr1	99	56.611	ENSMODG00000010658	TSR1	99	55.168	Monodelphis_domestica
ENSIPUG00000004618	tsr1	100	74.136	ENSMALG00000011681	tsr1	100	73.897	Monopterus_albus
ENSIPUG00000004618	tsr1	99	55.596	MGP_CAROLIEiJ_G0016727	Tsr1	99	53.976	Mus_caroli
ENSIPUG00000004618	tsr1	99	55.957	ENSMUSG00000038335	Tsr1	99	54.578	Mus_musculus
ENSIPUG00000004618	tsr1	99	56.197	MGP_PahariEiJ_G0017864	Tsr1	99	54.699	Mus_pahari
ENSIPUG00000004618	tsr1	99	55.957	MGP_SPRETEiJ_G0017570	Tsr1	99	54.578	Mus_spretus
ENSIPUG00000004618	tsr1	81	57.709	ENSMPUG00000013000	TSR1	100	56.681	Mustela_putorius_furo
ENSIPUG00000004618	tsr1	98	56.654	ENSMLUG00000003505	TSR1	99	55.922	Myotis_lucifugus
ENSIPUG00000004618	tsr1	100	75.060	ENSNBRG00000020728	tsr1	99	74.821	Neolamprologus_brichardi
ENSIPUG00000004618	tsr1	98	51.100	ENSNLEG00000017184	TSR1	51	49.361	Nomascus_leucogenys
ENSIPUG00000004618	tsr1	99	51.923	ENSMEUG00000015828	TSR1	99	51.504	Notamacropus_eugenii
ENSIPUG00000004618	tsr1	100	75.149	ENSONIG00000013131	tsr1	100	75.149	Oreochromis_niloticus
ENSIPUG00000004618	tsr1	95	48.947	ENSOANG00000008637	TSR1	94	68.732	Ornithorhynchus_anatinus
ENSIPUG00000004618	tsr1	99	56.077	ENSOCUG00000014256	TSR1	99	55.060	Oryctolagus_cuniculus
ENSIPUG00000004618	tsr1	100	73.628	ENSORLG00000004926	tsr1	99	72.792	Oryzias_latipes
ENSIPUG00000004618	tsr1	100	73.866	ENSORLG00020008792	tsr1	99	73.031	Oryzias_latipes_hni
ENSIPUG00000004618	tsr1	100	73.747	ENSORLG00015013838	tsr1	99	72.912	Oryzias_latipes_hsok
ENSIPUG00000004618	tsr1	100	73.421	ENSOMEG00000004830	tsr1	99	72.348	Oryzias_melastigma
ENSIPUG00000004618	tsr1	99	55.436	ENSOGAG00000004492	TSR1	99	54.827	Otolemur_garnettii
ENSIPUG00000004618	tsr1	99	56.558	ENSOARG00000015437	TSR1	97	55.663	Ovis_aries
ENSIPUG00000004618	tsr1	98	54.823	ENSPPAG00000036355	TSR1	98	54.090	Pan_paniscus
ENSIPUG00000004618	tsr1	99	55.288	ENSPPRG00000015519	-	99	54.567	Panthera_pardus
ENSIPUG00000004618	tsr1	99	55.288	ENSPTIG00000010608	TSR1	99	54.567	Panthera_tigris_altaica
ENSIPUG00000004618	tsr1	98	54.823	ENSPTRG00000008547	TSR1	98	54.090	Pan_troglodytes
ENSIPUG00000004618	tsr1	98	52.663	ENSPANG00000024463	TSR1	98	52.812	Papio_anubis
ENSIPUG00000004618	tsr1	100	71.087	ENSPKIG00000013972	tsr1	100	70.251	Paramormyrops_kingsleyae
ENSIPUG00000004618	tsr1	87	55.389	ENSPSIG00000018258	TSR1	99	55.252	Pelodiscus_sinensis
ENSIPUG00000004618	tsr1	99	71.310	ENSPMGG00000011577	tsr1	99	71.103	Periophthalmus_magnuspinnatus
ENSIPUG00000004618	tsr1	99	54.152	ENSPEMG00000018033	Tsr1	99	53.245	Peromyscus_maniculatus_bairdii
ENSIPUG00000004618	tsr1	99	55.942	ENSPCIG00000009357	TSR1	97	55.317	Phascolarctos_cinereus
ENSIPUG00000004618	tsr1	100	72.586	ENSPFOG00000004483	TSR1	100	73.182	Poecilia_formosa
ENSIPUG00000004618	tsr1	100	73.484	ENSPLAG00000022320	tsr1	99	73.484	Poecilia_latipinna
ENSIPUG00000004618	tsr1	100	73.246	ENSPMEG00000004577	tsr1	99	73.246	Poecilia_mexicana
ENSIPUG00000004618	tsr1	97	73.929	ENSPREG00000010354	tsr1	97	73.253	Poecilia_reticulata
ENSIPUG00000004618	tsr1	98	50.964	ENSPPYG00000007792	TSR1	98	50.911	Pongo_abelii
ENSIPUG00000004618	tsr1	52	69.767	ENSPCAG00000012973	-	70	70.270	Procavia_capensis
ENSIPUG00000004618	tsr1	99	55.276	ENSPCOG00000017928	TSR1	99	55.168	Propithecus_coquereli
ENSIPUG00000004618	tsr1	99	55.114	ENSPVAG00000002162	TSR1	99	54.578	Pteropus_vampyrus
ENSIPUG00000004618	tsr1	100	74.791	ENSPNYG00000016163	tsr1	99	74.552	Pundamilia_nyererei
ENSIPUG00000004618	tsr1	100	83.353	ENSPNAG00000008659	tsr1	100	83.829	Pygocentrus_nattereri
ENSIPUG00000004618	tsr1	99	55.422	ENSRNOG00000002980	Tsr1	99	54.337	Rattus_norvegicus
ENSIPUG00000004618	tsr1	98	54.469	ENSRBIG00000040016	TSR1	98	54.116	Rhinopithecus_bieti
ENSIPUG00000004618	tsr1	98	54.469	ENSRROG00000030361	TSR1	98	54.116	Rhinopithecus_roxellana
ENSIPUG00000004618	tsr1	98	55.122	ENSSBOG00000020785	TSR1	98	54.701	Saimiri_boliviensis_boliviensis
ENSIPUG00000004618	tsr1	99	56.851	ENSSHAG00000011394	TSR1	99	56.077	Sarcophilus_harrisii
ENSIPUG00000004618	tsr1	100	72.249	ENSSFOG00015005455	tsr1	100	72.249	Scleropages_formosus
ENSIPUG00000004618	tsr1	100	73.421	ENSSMAG00000009504	tsr1	100	73.540	Scophthalmus_maximus
ENSIPUG00000004618	tsr1	100	75.595	ENSSDUG00000012074	tsr1	99	76.429	Seriola_dumerili
ENSIPUG00000004618	tsr1	100	75.537	ENSSLDG00000002031	tsr1	99	76.253	Seriola_lalandi_dorsalis
ENSIPUG00000004618	tsr1	93	58.566	ENSSARG00000000759	TSR1	93	58.566	Sorex_araneus
ENSIPUG00000004618	tsr1	99	58.654	ENSSPUG00000007042	TSR1	99	58.053	Sphenodon_punctatus
ENSIPUG00000004618	tsr1	100	75.326	ENSSPAG00000021951	tsr1	100	75.089	Stegastes_partitus
ENSIPUG00000004618	tsr1	99	56.558	ENSSSCG00000038534	TSR1	99	55.663	Sus_scrofa
ENSIPUG00000004618	tsr1	90	59.445	ENSTGUG00000005883	TSR1	100	56.901	Taeniopygia_guttata
ENSIPUG00000004618	tsr1	100	73.118	ENSTRUG00000004665	tsr1	100	73.596	Takifugu_rubripes
ENSIPUG00000004618	tsr1	99	73.141	ENSTNIG00000016196	tsr1	100	73.501	Tetraodon_nigroviridis
ENSIPUG00000004618	tsr1	67	75.385	ENSTBEG00000015275	-	66	75.385	Tupaia_belangeri
ENSIPUG00000004618	tsr1	99	56.438	ENSTTRG00000001177	TSR1	99	55.301	Tursiops_truncatus
ENSIPUG00000004618	tsr1	99	55.114	ENSUAMG00000025160	TSR1	99	54.262	Ursus_americanus
ENSIPUG00000004618	tsr1	96	55.362	ENSUMAG00000009294	TSR1	98	54.115	Ursus_maritimus
ENSIPUG00000004618	tsr1	83	50.286	ENSVPAG00000000228	TSR1	99	47.443	Vicugna_pacos
ENSIPUG00000004618	tsr1	99	55.301	ENSVVUG00000021767	TSR1	99	54.458	Vulpes_vulpes
ENSIPUG00000004618	tsr1	100	53.404	ENSXETG00000023797	tsr1	100	53.800	Xenopus_tropicalis
ENSIPUG00000004618	tsr1	100	72.554	ENSXCOG00000009635	tsr1	100	72.673	Xiphophorus_couchianus
ENSIPUG00000004618	tsr1	100	72.999	ENSXMAG00000001397	tsr1	97	73.357	Xiphophorus_maculatus