EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000004625 (Gene tree)
Gene ID: 108273408
Gene Symbol: mrpl58
Alias: ict1|si:ch1073-357b18.5
Full Name: mitochondrial ribosomal protein L58
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 3437 bases
Position: chr13:18090013-18093449
Accession: 108273408
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000006654	RF-1	PF00472.20	1.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000006948	-	988	XM_017482598	ENSIPUP00000006654	198 (aa)	XP_017338087	A0A2D0S5T5

Gene Model

Click here to download ENSIPUG00000004625's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000004625's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000004625	mrpl58	86	57.955	ENSAPOG00000001092	-	90	57.955	Acanthochromis_polyacanthus
ENSIPUG00000004625	mrpl58	87	59.322	ENSAOCG00000017975	mrpl58	91	59.322	Amphiprion_ocellaris
ENSIPUG00000004625	mrpl58	75	67.568	ENSATEG00000005139	mrpl58	78	67.568	Anabas_testudineus
ENSIPUG00000004625	mrpl58	67	56.061	ENSAPLG00000006285	-	88	56.061	Anas_platyrhynchos
ENSIPUG00000004625	mrpl58	81	60.571	ENSACLG00000023065	mrpl58	99	60.571	Astatotilapia_calliptera
ENSIPUG00000004625	mrpl58	100	64.851	ENSAMXG00000034224	mrpl58	100	64.851	Astyanax_mexicanus
ENSIPUG00000004625	mrpl58	67	36.567	WBGene00019838	R02F2.9	81	36.567	Caenorhabditis_elegans
ENSIPUG00000004625	mrpl58	86	59.538	ENSDARG00000078835	mrpl58	89	59.538	Danio_rerio
ENSIPUG00000004625	mrpl58	74	69.178	ENSELUG00000022498	mrpl58	89	70.588	Esox_lucius
ENSIPUG00000004625	mrpl58	69	55.882	ENSFALG00000001244	-	70	55.882	Ficedula_albicollis
ENSIPUG00000004625	mrpl58	79	67.308	ENSFHEG00000018330	mrpl58	78	67.308	Fundulus_heteroclitus
ENSIPUG00000004625	mrpl58	81	60.571	ENSHBUG00000005924	mrpl58	99	60.571	Haplochromis_burtoni
ENSIPUG00000004625	mrpl58	74	62.329	ENSHCOG00000018870	mrpl58	74	62.329	Hippocampus_comes
ENSIPUG00000004625	mrpl58	71	65.000	ENSKMAG00000000189	-	74	65.000	Kryptolebias_marmoratus
ENSIPUG00000004625	mrpl58	74	67.123	ENSLBEG00000023210	mrpl58	77	67.123	Labrus_bergylta
ENSIPUG00000004625	mrpl58	100	55.500	ENSMAMG00000002209	mrpl58	100	55.500	Mastacembelus_armatus
ENSIPUG00000004625	mrpl58	85	58.065	ENSMZEG00005005403	mrpl58	96	58.065	Maylandia_zebra
ENSIPUG00000004625	mrpl58	68	74.074	ENSONIG00000019597	mrpl58	70	74.074	Oreochromis_niloticus
ENSIPUG00000004625	mrpl58	71	65.714	ENSORLG00000020755	mrpl58	77	65.714	Oryzias_latipes
ENSIPUG00000004625	mrpl58	71	67.143	ENSORLG00020010282	mrpl58	77	67.143	Oryzias_latipes_hni
ENSIPUG00000004625	mrpl58	72	65.035	ENSOMEG00000016576	mrpl58	79	65.035	Oryzias_melastigma
ENSIPUG00000004625	mrpl58	69	69.118	ENSPMGG00000021529	mrpl58	91	69.118	Periophthalmus_magnuspinnatus
ENSIPUG00000004625	mrpl58	100	66.000	ENSPNAG00000025708	mrpl58	97	66.000	Pygocentrus_nattereri
ENSIPUG00000004625	mrpl58	71	67.857	ENSSDUG00000011564	mrpl58	74	67.857	Seriola_dumerili
ENSIPUG00000004625	mrpl58	71	66.429	ENSSLDG00000001648	mrpl58	74	66.429	Seriola_lalandi_dorsalis
ENSIPUG00000004625	mrpl58	74	67.808	ENSSPAG00000011315	mrpl58	74	67.808	Stegastes_partitus