EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000004633 (Gene tree)
Gene ID: -
Gene Symbol: zgc:152968
Alias: -
Full Name: RNA exonuclease 1 homolog
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 14736 bases
Position: chr3:5395065-5409800
Accession: 108262836
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000006687	RNase_T	PF00929.24	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000006981	-	2526	XM_017463189	ENSIPUP00000006687	841 (aa)	XP_017318678	-

Gene Model

Click here to download ENSIPUG00000004633's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000004633's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000004633	zgc:152968	99	46.221	ENSAPOG00000005095	zgc:152968	100	46.221	Acanthochromis_polyacanthus
ENSIPUG00000004633	zgc:152968	79	58.943	ENSACIG00000002527	zgc:152968	79	55.678	Amphilophus_citrinellus
ENSIPUG00000004633	zgc:152968	95	63.527	ENSAOCG00000018049	-	79	63.527	Amphiprion_ocellaris
ENSIPUG00000004633	zgc:152968	90	64.619	ENSAPEG00000012559	zgc:152968	76	64.619	Amphiprion_percula
ENSIPUG00000004633	zgc:152968	75	65.196	ENSACLG00000020524	-	75	59.646	Astatotilapia_calliptera
ENSIPUG00000004633	zgc:152968	89	53.415	ENSCVAG00000015400	zgc:152968	82	53.415	Cyprinodon_variegatus
ENSIPUG00000004633	zgc:152968	82	75.556	ENSDARG00000037002	zgc:152968	61	75.556	Danio_rerio
ENSIPUG00000004633	zgc:152968	70	67.482	ENSELUG00000014272	zgc:152968	54	67.482	Esox_lucius
ENSIPUG00000004633	zgc:152968	72	80.769	ENSFHEG00000003641	-	99	42.915	Fundulus_heteroclitus
ENSIPUG00000004633	zgc:152968	69	63.415	ENSGAFG00000016810	-	60	64.691	Gambusia_affinis
ENSIPUG00000004633	zgc:152968	71	63.947	ENSHBUG00000007524	-	56	63.947	Haplochromis_burtoni
ENSIPUG00000004633	zgc:152968	72	63.570	ENSLBEG00000026485	zgc:152968	66	63.570	Labrus_bergylta
ENSIPUG00000004633	zgc:152968	71	59.954	ENSMAMG00000005920	-	62	59.954	Mastacembelus_armatus
ENSIPUG00000004633	zgc:152968	81	60.241	ENSMZEG00005013783	-	74	60.852	Maylandia_zebra
ENSIPUG00000004633	zgc:152968	99	47.092	ENSMMOG00000018072	zgc:152968	87	68.750	Mola_mola
ENSIPUG00000004633	zgc:152968	75	64.865	ENSMALG00000003536	-	59	64.865	Monopterus_albus
ENSIPUG00000004633	zgc:152968	74	64.216	ENSONIG00000016897	-	66	64.198	Oreochromis_niloticus
ENSIPUG00000004633	zgc:152968	65	75.000	ENSORLG00020012504	-	79	61.671	Oryzias_latipes_hni
ENSIPUG00000004633	zgc:152968	80	52.700	ENSOMEG00000008840	-	85	52.700	Oryzias_melastigma
ENSIPUG00000004633	zgc:152968	79	63.835	ENSPFOG00000006104	-	68	64.390	Poecilia_formosa
ENSIPUG00000004633	zgc:152968	83	60.543	ENSPLAG00000005034	-	81	58.203	Poecilia_latipinna
ENSIPUG00000004633	zgc:152968	79	64.146	ENSPMEG00000018012	-	64	64.146	Poecilia_mexicana
ENSIPUG00000004633	zgc:152968	75	63.835	ENSPREG00000007481	-	76	54.086	Poecilia_reticulata
ENSIPUG00000004633	zgc:152968	58	65.450	ENSSFOG00015023869	zgc:152968	70	56.863	Scleropages_formosus
ENSIPUG00000004633	zgc:152968	90	62.530	ENSSMAG00000008149	-	69	62.530	Scophthalmus_maximus
ENSIPUG00000004633	zgc:152968	72	88.000	ENSSDUG00000022323	-	74	65.517	Seriola_dumerili
ENSIPUG00000004633	zgc:152968	84	65.764	ENSSLDG00000018799	zgc:152968	73	65.764	Seriola_lalandi_dorsalis
ENSIPUG00000004633	zgc:152968	77	63.614	ENSSPAG00000007632	-	65	63.614	Stegastes_partitus
ENSIPUG00000004633	zgc:152968	73	69.444	ENSTRUG00000025441	zgc:152968	59	69.444	Takifugu_rubripes
ENSIPUG00000004633	zgc:152968	69	62.287	ENSXMAG00000026483	-	55	61.985	Xiphophorus_maculatus