EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000004642 (Gene tree)
Gene ID: 108278349
Gene Symbol: si:dkeyp-69e1.8
Alias: -
Full Name: GTPase IMAP family member 4-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 8045 bases
Position: chr2:12009328-12017372
Accession: 108278349
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000006676	MMR_HSR1	PF01926.23	1.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000006970	-	3539	XM_017491676	ENSIPUP00000006676	361 (aa)	XP_017347165	A0A2D0SXW5

Gene Model

Click here to download ENSIPUG00000004642's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000004642's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000004642	si:dkeyp-69e1.8	62	34.848	ENSIPUG00000009955	-	69	33.898
ENSIPUG00000004642	si:dkeyp-69e1.8	70	33.333	ENSIPUG00000004131	-	52	32.955
ENSIPUG00000004642	si:dkeyp-69e1.8	53	38.144	ENSIPUG00000019579	-	63	31.560
ENSIPUG00000004642	si:dkeyp-69e1.8	55	35.859	ENSIPUG00000000721	-	78	35.859
ENSIPUG00000004642	si:dkeyp-69e1.8	54	33.005	ENSIPUG00000013342	-	53	34.884
ENSIPUG00000004642	si:dkeyp-69e1.8	57	37.198	ENSIPUG00000000911	-	98	37.198
ENSIPUG00000004642	si:dkeyp-69e1.8	62	35.965	ENSIPUG00000000891	-	73	34.241
ENSIPUG00000004642	si:dkeyp-69e1.8	62	35.398	ENSIPUG00000000899	-	83	35.398
ENSIPUG00000004642	si:dkeyp-69e1.8	60	34.545	ENSIPUG00000009967	-	84	34.545
ENSIPUG00000004642	si:dkeyp-69e1.8	55	35.500	ENSIPUG00000008956	-	92	33.068
ENSIPUG00000004642	si:dkeyp-69e1.8	63	34.199	ENSIPUG00000009321	-	68	34.199
ENSIPUG00000004642	si:dkeyp-69e1.8	55	40.000	ENSIPUG00000000908	-	68	36.604
ENSIPUG00000004642	si:dkeyp-69e1.8	68	35.659	ENSIPUG00000009403	-	86	35.659
ENSIPUG00000004642	si:dkeyp-69e1.8	61	36.652	ENSIPUG00000000791	-	62	38.547
ENSIPUG00000004642	si:dkeyp-69e1.8	63	34.199	ENSIPUG00000009291	-	66	35.065

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000004642	si:dkeyp-69e1.8	55	47.236	ENSAMXG00000040688	-	71	39.155	Astyanax_mexicanus
ENSIPUG00000004642	si:dkeyp-69e1.8	65	42.975	ENSMMOG00000008509	-	76	42.975	Mola_mola
ENSIPUG00000004642	si:dkeyp-69e1.8	91	35.196	ENSORLG00000003769	-	54	35.196	Oryzias_latipes
ENSIPUG00000004642	si:dkeyp-69e1.8	90	35.227	ENSORLG00020009935	-	54	35.475	Oryzias_latipes_hni
ENSIPUG00000004642	si:dkeyp-69e1.8	89	37.952	ENSPFOG00000013403	-	95	37.952	Poecilia_formosa
ENSIPUG00000004642	si:dkeyp-69e1.8	92	39.766	ENSPNAG00000000165	-	65	41.127	Pygocentrus_nattereri
ENSIPUG00000004642	si:dkeyp-69e1.8	62	45.339	ENSXCOG00000013594	-	88	45.339	Xiphophorus_couchianus
ENSIPUG00000004642	si:dkeyp-69e1.8	62	45.763	ENSXMAG00000025089	-	79	45.763	Xiphophorus_maculatus