EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000004850 (Gene tree)
Gene ID: 108268595
Gene Symbol: gnl1
Alias: zgc:154008
Full Name: G protein nucleolar 1 (putative)
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 10635 bases
Position: chr1:9412900-9423534
Accession: 108268595
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000007001	MMR_HSR1	PF01926.23	2.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000007305	-	1815	XM_017473640	ENSIPUP00000007001	604 (aa)	XP_017329129	A0A2D0RF09

Gene Model

Click here to download ENSIPUG00000004850's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000004850's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000004850	gnl1	64	35.429	ENSIPUG00000008631	lsg1	63	35.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000004850	gnl1	99	56.472	ENSG00000204590	GNL1	90	58.770	Homo_sapiens
ENSIPUG00000004850	gnl1	100	73.616	ENSAPOG00000006315	gnl1	100	69.544	Acanthochromis_polyacanthus
ENSIPUG00000004850	gnl1	99	56.726	ENSAMEG00000013421	GNL1	90	58.696	Ailuropoda_melanoleuca
ENSIPUG00000004850	gnl1	100	74.178	ENSACIG00000013539	gnl1	100	71.711	Amphilophus_citrinellus
ENSIPUG00000004850	gnl1	100	73.899	ENSAOCG00000008320	gnl1	100	70.799	Amphiprion_ocellaris
ENSIPUG00000004850	gnl1	100	74.225	ENSAPEG00000011154	gnl1	100	71.126	Amphiprion_percula
ENSIPUG00000004850	gnl1	100	73.486	ENSATEG00000020647	gnl1	100	71.686	Anabas_testudineus
ENSIPUG00000004850	gnl1	89	59.124	ENSACAG00000010395	GNL1	87	59.307	Anolis_carolinensis
ENSIPUG00000004850	gnl1	99	56.774	ENSANAG00000028106	GNL1	90	58.919	Aotus_nancymaae
ENSIPUG00000004850	gnl1	100	74.262	ENSACLG00000025394	gnl1	100	71.148	Astatotilapia_calliptera
ENSIPUG00000004850	gnl1	100	72.893	ENSAMXG00000016080	gnl1	100	74.545	Astyanax_mexicanus
ENSIPUG00000004850	gnl1	99	56.796	ENSBTAG00000025516	GNL1	90	59.132	Bos_taurus
ENSIPUG00000004850	gnl1	99	56.381	ENSCJAG00000019996	GNL1	90	58.633	Callithrix_jacchus
ENSIPUG00000004850	gnl1	99	56.311	ENSCAFG00000000396	GNL1	90	58.770	Canis_familiaris
ENSIPUG00000004850	gnl1	99	56.311	ENSCAFG00020017556	GNL1	90	58.770	Canis_lupus_dingo
ENSIPUG00000004850	gnl1	99	56.039	ENSCHIG00000019763	GNL1	90	58.514	Capra_hircus
ENSIPUG00000004850	gnl1	99	56.796	ENSTSYG00000000164	GNL1	90	59.132	Carlito_syrichta
ENSIPUG00000004850	gnl1	88	58.106	ENSCAPG00000006662	GNL1	86	60.125	Cavia_aperea
ENSIPUG00000004850	gnl1	99	57.532	ENSCPOG00000001944	GNL1	90	59.206	Cavia_porcellus
ENSIPUG00000004850	gnl1	99	56.958	ENSCCAG00000037467	GNL1	90	59.132	Cebus_capucinus
ENSIPUG00000004850	gnl1	99	56.888	ENSCATG00000045232	GNL1	90	58.696	Cercocebus_atys
ENSIPUG00000004850	gnl1	92	56.370	ENSCLAG00000012557	GNL1	89	58.317	Chinchilla_lanigera
ENSIPUG00000004850	gnl1	99	56.888	ENSCSAG00000008202	GNL1	90	58.696	Chlorocebus_sabaeus
ENSIPUG00000004850	gnl1	86	52.294	ENSCHOG00000010907	GNL1	77	63.636	Choloepus_hoffmanni
ENSIPUG00000004850	gnl1	89	59.963	ENSCPBG00000018821	GNL1	91	60.150	Chrysemys_picta_bellii
ENSIPUG00000004850	gnl1	89	46.972	ENSCING00000014499	-	100	47.890	Ciona_intestinalis
ENSIPUG00000004850	gnl1	94	44.522	ENSCSAVG00000007354	-	90	45.421	Ciona_savignyi
ENSIPUG00000004850	gnl1	99	56.888	ENSCANG00000012933	GNL1	90	58.696	Colobus_angolensis_palliatus
ENSIPUG00000004850	gnl1	99	56.958	ENSCGRG00001004986	Gnl1	90	58.258	Cricetulus_griseus_chok1gshd
ENSIPUG00000004850	gnl1	92	56.818	ENSCGRG00000014309	Gnl1	89	57.553	Cricetulus_griseus_crigri
ENSIPUG00000004850	gnl1	90	65.217	ENSCSEG00000019714	gnl1	90	65.751	Cynoglossus_semilaevis
ENSIPUG00000004850	gnl1	91	72.595	ENSCVAG00000022650	gnl1	89	72.928	Cyprinodon_variegatus
ENSIPUG00000004850	gnl1	100	80.298	ENSDARG00000061789	gnl1	100	80.298	Danio_rerio
ENSIPUG00000004850	gnl1	99	50.000	ENSDNOG00000041571	GNL1	88	52.222	Dasypus_novemcinctus
ENSIPUG00000004850	gnl1	99	38.449	FBgn0032882	Ns4	83	41.551	Drosophila_melanogaster
ENSIPUG00000004850	gnl1	52	59.248	ENSETEG00000005518	-	80	63.529	Echinops_telfairi
ENSIPUG00000004850	gnl1	58	50.933	ENSEBUG00000009531	-	79	59.091	Eptatretus_burgeri
ENSIPUG00000004850	gnl1	99	57.282	ENSEASG00005018610	GNL1	90	59.855	Equus_asinus_asinus
ENSIPUG00000004850	gnl1	99	57.443	ENSECAG00000023081	GNL1	90	59.855	Equus_caballus
ENSIPUG00000004850	gnl1	100	73.548	ENSELUG00000006281	gnl1	100	73.548	Esox_lucius
ENSIPUG00000004850	gnl1	99	57.282	ENSFCAG00000007676	GNL1	90	58.951	Felis_catus
ENSIPUG00000004850	gnl1	87	59.404	ENSFDAG00000000584	GNL1	88	61.099	Fukomys_damarensis
ENSIPUG00000004850	gnl1	100	66.775	ENSFHEG00000011353	gnl1	100	66.775	Fundulus_heteroclitus
ENSIPUG00000004850	gnl1	99	69.737	ENSGMOG00000015224	gnl1	90	73.849	Gadus_morhua
ENSIPUG00000004850	gnl1	89	73.260	ENSGAFG00000014611	gnl1	88	73.260	Gambusia_affinis
ENSIPUG00000004850	gnl1	99	69.903	ENSGACG00000009765	gnl1	90	72.777	Gasterosteus_aculeatus
ENSIPUG00000004850	gnl1	99	56.634	ENSGGOG00000014590	GNL1	90	58.951	Gorilla_gorilla
ENSIPUG00000004850	gnl1	100	74.098	ENSHBUG00000016745	gnl1	100	70.984	Haplochromis_burtoni
ENSIPUG00000004850	gnl1	99	56.888	ENSHGLG00000017193	GNL1	90	58.664	Heterocephalus_glaber_female
ENSIPUG00000004850	gnl1	87	56.343	ENSHGLG00100009994	GNL1	89	58.650	Heterocephalus_glaber_male
ENSIPUG00000004850	gnl1	100	70.656	ENSHCOG00000012493	gnl1	89	72.928	Hippocampus_comes
ENSIPUG00000004850	gnl1	99	57.305	ENSSTOG00000011822	GNL1	90	58.984	Ictidomys_tridecemlineatus
ENSIPUG00000004850	gnl1	99	57.050	ENSJJAG00000010831	-	90	58.258	Jaculus_jaculus
ENSIPUG00000004850	gnl1	99	70.000	ENSKMAG00000009059	gnl1	99	70.000	Kryptolebias_marmoratus
ENSIPUG00000004850	gnl1	99	70.540	ENSLBEG00000011038	gnl1	89	72.978	Labrus_bergylta
ENSIPUG00000004850	gnl1	99	57.050	ENSLACG00000001713	GNL1	89	60.440	Latimeria_chalumnae
ENSIPUG00000004850	gnl1	99	57.374	ENSLAFG00000030406	GNL1	92	58.185	Loxodonta_africana
ENSIPUG00000004850	gnl1	99	56.888	ENSMFAG00000001167	GNL1	90	58.696	Macaca_fascicularis
ENSIPUG00000004850	gnl1	99	56.888	ENSMMUG00000020077	GNL1	90	58.696	Macaca_mulatta
ENSIPUG00000004850	gnl1	99	56.888	ENSMNEG00000031618	GNL1	90	58.696	Macaca_nemestrina
ENSIPUG00000004850	gnl1	99	56.888	ENSMLEG00000030252	GNL1	90	58.696	Mandrillus_leucophaeus
ENSIPUG00000004850	gnl1	100	74.141	ENSMAMG00000003554	gnl1	100	71.686	Mastacembelus_armatus
ENSIPUG00000004850	gnl1	100	74.262	ENSMZEG00005018216	gnl1	100	71.148	Maylandia_zebra
ENSIPUG00000004850	gnl1	99	55.700	ENSMAUG00000015596	Gnl1	90	58.333	Mesocricetus_auratus
ENSIPUG00000004850	gnl1	99	56.180	ENSMICG00000014708	GNL1	90	58.409	Microcebus_murinus
ENSIPUG00000004850	gnl1	99	56.564	ENSMOCG00000020934	Gnl1	90	58.514	Microtus_ochrogaster
ENSIPUG00000004850	gnl1	100	72.742	ENSMMOG00000015833	gnl1	100	70.608	Mola_mola
ENSIPUG00000004850	gnl1	99	55.447	ENSMODG00000015964	GNL1	86	59.165	Monodelphis_domestica
ENSIPUG00000004850	gnl1	100	72.240	ENSMALG00000022523	gnl1	100	70.942	Monopterus_albus
ENSIPUG00000004850	gnl1	89	59.099	MGP_CAROLIEiJ_G0021547	Gnl1	90	59.025	Mus_caroli
ENSIPUG00000004850	gnl1	99	56.726	ENSMUSG00000024429	Gnl1	90	59.058	Mus_musculus
ENSIPUG00000004850	gnl1	99	56.726	MGP_PahariEiJ_G0020539	Gnl1	90	59.058	Mus_pahari
ENSIPUG00000004850	gnl1	99	56.726	MGP_SPRETEiJ_G0022452	Gnl1	90	59.058	Mus_spretus
ENSIPUG00000004850	gnl1	92	57.168	ENSMPUG00000011828	GNL1	70	58.476	Mustela_putorius_furo
ENSIPUG00000004850	gnl1	93	56.818	ENSMLUG00000008722	GNL1	86	58.509	Myotis_lucifugus
ENSIPUG00000004850	gnl1	99	57.282	ENSNGAG00000000745	Gnl1	90	57.971	Nannospalax_galili
ENSIPUG00000004850	gnl1	100	73.684	ENSNBRG00000020813	gnl1	100	71.217	Neolamprologus_brichardi
ENSIPUG00000004850	gnl1	89	55.935	ENSNLEG00000005058	GNL1	79	55.856	Nomascus_leucogenys
ENSIPUG00000004850	gnl1	87	56.691	ENSOPRG00000000007	GNL1	89	58.898	Ochotona_princeps
ENSIPUG00000004850	gnl1	99	57.767	ENSODEG00000018111	GNL1	90	59.313	Octodon_degus
ENSIPUG00000004850	gnl1	100	73.607	ENSONIG00000013044	gnl1	100	70.492	Oreochromis_niloticus
ENSIPUG00000004850	gnl1	99	55.754	ENSOCUG00000002110	GNL1	90	57.428	Oryctolagus_cuniculus
ENSIPUG00000004850	gnl1	90	72.152	ENSORLG00000012862	gnl1	89	72.578	Oryzias_latipes
ENSIPUG00000004850	gnl1	90	71.790	ENSORLG00020003923	gnl1	89	72.212	Oryzias_latipes_hni
ENSIPUG00000004850	gnl1	90	71.609	ENSORLG00015009552	gnl1	89	72.029	Oryzias_latipes_hsok
ENSIPUG00000004850	gnl1	100	71.311	ENSOMEG00000014409	gnl1	89	73.432	Oryzias_melastigma
ENSIPUG00000004850	gnl1	95	55.838	ENSOGAG00000024106	-	92	57.065	Otolemur_garnettii
ENSIPUG00000004850	gnl1	99	56.958	ENSOGAG00000004428	-	90	59.313	Otolemur_garnettii
ENSIPUG00000004850	gnl1	99	54.992	ENSOARG00000012966	GNL1	90	57.699	Ovis_aries
ENSIPUG00000004850	gnl1	99	56.796	ENSPPAG00000044009	GNL1	90	59.132	Pan_paniscus
ENSIPUG00000004850	gnl1	99	56.958	ENSPPRG00000007039	GNL1	90	59.313	Panthera_pardus
ENSIPUG00000004850	gnl1	99	56.796	ENSPTIG00000011307	GNL1	90	59.132	Panthera_tigris_altaica
ENSIPUG00000004850	gnl1	94	58.148	ENSPTRG00000017928	GNL1	90	58.739	Pan_troglodytes
ENSIPUG00000004850	gnl1	99	56.888	ENSPANG00000020097	GNL1	90	58.696	Papio_anubis
ENSIPUG00000004850	gnl1	100	71.170	ENSPKIG00000002200	gnl1	89	73.234	Paramormyrops_kingsleyae
ENSIPUG00000004850	gnl1	82	50.394	ENSPSIG00000008441	GNL1	86	50.787	Pelodiscus_sinensis
ENSIPUG00000004850	gnl1	89	74.954	ENSPMGG00000007259	gnl1	100	70.115	Periophthalmus_magnuspinnatus
ENSIPUG00000004850	gnl1	92	56.942	ENSPEMG00000002731	Gnl1	88	57.663	Peromyscus_maniculatus_bairdii
ENSIPUG00000004850	gnl1	89	58.621	ENSPCIG00000014975	GNL1	90	58.802	Phascolarctos_cinereus
ENSIPUG00000004850	gnl1	100	69.294	ENSPFOG00000015398	gnl1	89	74.444	Poecilia_formosa
ENSIPUG00000004850	gnl1	91	73.723	ENSPLAG00000003231	gnl1	88	74.074	Poecilia_latipinna
ENSIPUG00000004850	gnl1	100	69.294	ENSPMEG00000005001	gnl1	89	74.444	Poecilia_mexicana
ENSIPUG00000004850	gnl1	100	69.622	ENSPREG00000012818	gnl1	89	74.444	Poecilia_reticulata
ENSIPUG00000004850	gnl1	99	56.958	ENSPPYG00000016408	GNL1	90	59.132	Pongo_abelii
ENSIPUG00000004850	gnl1	56	66.901	ENSPCAG00000004522	-	70	66.901	Procavia_capensis
ENSIPUG00000004850	gnl1	99	57.443	ENSPCOG00000015669	GNL1	90	59.132	Propithecus_coquereli
ENSIPUG00000004850	gnl1	99	56.585	ENSPVAG00000003970	GNL1	90	58.802	Pteropus_vampyrus
ENSIPUG00000004850	gnl1	100	73.934	ENSPNYG00000022614	gnl1	100	70.820	Pundamilia_nyererei
ENSIPUG00000004850	gnl1	100	81.126	ENSPNAG00000021257	gnl1	100	81.126	Pygocentrus_nattereri
ENSIPUG00000004850	gnl1	99	56.564	ENSRNOG00000000798	Gnl1	90	58.877	Rattus_norvegicus
ENSIPUG00000004850	gnl1	99	56.888	ENSRBIG00000019143	GNL1	90	58.696	Rhinopithecus_bieti
ENSIPUG00000004850	gnl1	99	56.888	ENSRROG00000030029	GNL1	90	58.696	Rhinopithecus_roxellana
ENSIPUG00000004850	gnl1	99	56.958	ENSSBOG00000031909	GNL1	90	59.132	Saimiri_boliviensis_boliviensis
ENSIPUG00000004850	gnl1	99	54.295	ENSSHAG00000007557	GNL1	91	58.094	Sarcophilus_harrisii
ENSIPUG00000004850	gnl1	100	69.836	ENSSFOG00015013921	gnl1	88	74.302	Scleropages_formosus
ENSIPUG00000004850	gnl1	100	71.195	ENSSMAG00000010147	gnl1	100	69.558	Scophthalmus_maximus
ENSIPUG00000004850	gnl1	100	75.041	ENSSDUG00000013824	gnl1	100	71.941	Seriola_dumerili
ENSIPUG00000004850	gnl1	100	74.878	ENSSLDG00000024560	gnl1	100	71.778	Seriola_lalandi_dorsalis
ENSIPUG00000004850	gnl1	57	60.484	ENSSARG00000006156	-	69	69.399	Sorex_araneus
ENSIPUG00000004850	gnl1	99	55.217	ENSSPUG00000015374	GNL1	100	54.896	Sphenodon_punctatus
ENSIPUG00000004850	gnl1	100	73.246	ENSSPAG00000017541	gnl1	100	70.473	Stegastes_partitus
ENSIPUG00000004850	gnl1	99	57.605	ENSSSCG00000001372	GNL1	97	59.815	Sus_scrofa
ENSIPUG00000004850	gnl1	100	66.502	ENSTRUG00000011226	gnl1	92	66.337	Takifugu_rubripes
ENSIPUG00000004850	gnl1	99	65.523	ENSTNIG00000008017	gnl1	91	70.588	Tetraodon_nigroviridis
ENSIPUG00000004850	gnl1	99	52.913	ENSTBEG00000007538	GNL1	90	54.069	Tupaia_belangeri
ENSIPUG00000004850	gnl1	99	56.958	ENSTTRG00000008287	GNL1	90	58.770	Tursiops_truncatus
ENSIPUG00000004850	gnl1	99	55.968	ENSUAMG00000007671	GNL1	90	58.696	Ursus_americanus
ENSIPUG00000004850	gnl1	99	52.970	ENSUMAG00000018935	GNL1	90	55.315	Ursus_maritimus
ENSIPUG00000004850	gnl1	99	56.311	ENSVVUG00000009537	GNL1	91	58.770	Vulpes_vulpes
ENSIPUG00000004850	gnl1	99	52.320	ENSXETG00000024087	gnl1	100	53.130	Xenopus_tropicalis
ENSIPUG00000004850	gnl1	100	68.966	ENSXCOG00000019185	gnl1	89	74.074	Xiphophorus_couchianus
ENSIPUG00000004850	gnl1	100	68.966	ENSXMAG00000011015	gnl1	89	74.074	Xiphophorus_maculatus