EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000004876 (Gene tree)
Gene ID: 108266009
Gene Symbol: ddx20
Alias: fb59a11|si:dkey-193l3.3|si:dkey-193l3.4|wu:fb16g08|wu:fb59a11
Full Name: DEAD-box helicase 20
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 8334 bases
Position: chr5:24252320-24260653
Accession: 108266009
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000007118	ResIII	PF04851.15	2.2e-05	1	1
ENSIPUP00000007118	DEAD	PF00270.29	1.1e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000007431	-	4065	XM_017468940	ENSIPUP00000007118	797 (aa)	XP_017324429	W5UEH5

Gene Model

Click here to download ENSIPUG00000004876's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000004876's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000004876	ddx20	50	33.920	ENSIPUG00000012823	DDX6	81	33.920
ENSIPUG00000004876	ddx20	50	35.176	ENSIPUG00000000616	ddx6	83	35.176
ENSIPUG00000004876	ddx20	50	34.673	ENSIPUG00000008367	-	80	34.673

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000004876	ddx20	69	61.604	ENSG00000064703	DDX20	67	74.194	Homo_sapiens
ENSIPUG00000004876	ddx20	99	57.057	ENSAPOG00000017383	DDX20	99	56.763	Acanthochromis_polyacanthus
ENSIPUG00000004876	ddx20	99	51.095	ENSAMEG00000005344	DDX20	95	50.000	Ailuropoda_melanoleuca
ENSIPUG00000004876	ddx20	99	57.073	ENSACIG00000013095	ddx20	69	71.813	Amphilophus_citrinellus
ENSIPUG00000004876	ddx20	99	57.057	ENSAOCG00000013474	DDX20	99	57.439	Amphiprion_ocellaris
ENSIPUG00000004876	ddx20	99	55.938	ENSAPEG00000006690	ddx20	99	57.491	Amphiprion_percula
ENSIPUG00000004876	ddx20	99	57.734	ENSATEG00000002941	ddx20	99	58.213	Anabas_testudineus
ENSIPUG00000004876	ddx20	69	51.028	ENSAPLG00000013826	DDX20	89	47.167	Anas_platyrhynchos
ENSIPUG00000004876	ddx20	68	61.754	ENSACAG00000006235	DDX20	74	61.754	Anolis_carolinensis
ENSIPUG00000004876	ddx20	69	61.092	ENSANAG00000037881	DDX20	70	61.092	Aotus_nancymaae
ENSIPUG00000004876	ddx20	100	56.220	ENSACLG00000009485	ddx20	100	56.711	Astatotilapia_calliptera
ENSIPUG00000004876	ddx20	99	50.784	ENSBTAG00000018717	DDX20	70	62.284	Bos_taurus
ENSIPUG00000004876	ddx20	99	50.361	ENSCJAG00000013428	DDX20	68	61.263	Callithrix_jacchus
ENSIPUG00000004876	ddx20	99	50.361	ENSCAFG00000013674	DDX20	99	47.191	Canis_familiaris
ENSIPUG00000004876	ddx20	99	51.418	ENSCAFG00020008055	DDX20	92	75.244	Canis_lupus_dingo
ENSIPUG00000004876	ddx20	99	51.092	ENSCHIG00000011219	DDX20	70	62.803	Capra_hircus
ENSIPUG00000004876	ddx20	99	50.060	ENSTSYG00000000153	DDX20	70	61.433	Carlito_syrichta
ENSIPUG00000004876	ddx20	54	75.309	ENSCAPG00000017427	DDX20	64	75.309	Cavia_aperea
ENSIPUG00000004876	ddx20	99	49.574	ENSCPOG00000032340	DDX20	72	60.169	Cavia_porcellus
ENSIPUG00000004876	ddx20	69	61.092	ENSCCAG00000026759	DDX20	70	61.092	Cebus_capucinus
ENSIPUG00000004876	ddx20	69	60.884	ENSCATG00000039030	DDX20	70	60.884	Cercocebus_atys
ENSIPUG00000004876	ddx20	99	50.792	ENSCLAG00000008874	DDX20	95	51.154	Chinchilla_lanigera
ENSIPUG00000004876	ddx20	99	49.637	ENSCSAG00000001582	DDX20	70	61.158	Chlorocebus_sabaeus
ENSIPUG00000004876	ddx20	68	65.378	ENSCPBG00000021256	DDX20	72	65.378	Chrysemys_picta_bellii
ENSIPUG00000004876	ddx20	50	61.364	ENSCSAVG00000003045	-	98	61.364	Ciona_savignyi
ENSIPUG00000004876	ddx20	99	49.274	ENSCANG00000041894	DDX20	70	61.158	Colobus_angolensis_palliatus
ENSIPUG00000004876	ddx20	69	62.003	ENSCGRG00001014132	Ddx20	70	62.003	Cricetulus_griseus_chok1gshd
ENSIPUG00000004876	ddx20	61	59.570	ENSCGRG00000002300	Ddx20	71	59.570	Cricetulus_griseus_crigri
ENSIPUG00000004876	ddx20	88	51.651	ENSCSEG00000018265	DDX20	57	68.308	Cynoglossus_semilaevis
ENSIPUG00000004876	ddx20	70	71.352	ENSCVAG00000014821	ddx20	100	57.073	Cyprinodon_variegatus
ENSIPUG00000004876	ddx20	71	73.137	ENSDARG00000061204	ddx20	73	73.137	Danio_rerio
ENSIPUG00000004876	ddx20	69	61.684	ENSDNOG00000030865	DDX20	70	61.684	Dasypus_novemcinctus
ENSIPUG00000004876	ddx20	99	50.663	ENSDORG00000011660	Ddx20	71	61.962	Dipodomys_ordii
ENSIPUG00000004876	ddx20	99	49.758	ENSEASG00005005454	DDX20	70	61.765	Equus_asinus_asinus
ENSIPUG00000004876	ddx20	99	49.517	ENSECAG00000013565	DDX20	70	61.592	Equus_caballus
ENSIPUG00000004876	ddx20	100	56.112	ENSELUG00000010260	ddx20	71	69.043	Esox_lucius
ENSIPUG00000004876	ddx20	99	51.341	ENSFCAG00000025736	DDX20	70	62.392	Felis_catus
ENSIPUG00000004876	ddx20	62	61.905	ENSFALG00000000666	DDX20	73	61.905	Ficedula_albicollis
ENSIPUG00000004876	ddx20	96	50.313	ENSFDAG00000001140	DDX20	89	51.064	Fukomys_damarensis
ENSIPUG00000004876	ddx20	74	64.198	ENSGALG00000001504	DDX20	88	58.983	Gallus_gallus
ENSIPUG00000004876	ddx20	99	56.618	ENSGAFG00000006427	ddx20	99	56.933	Gambusia_affinis
ENSIPUG00000004876	ddx20	98	51.095	ENSGAGG00000000130	DDX20	73	64.062	Gopherus_agassizii
ENSIPUG00000004876	ddx20	99	50.180	ENSGGOG00000015576	DDX20	70	61.604	Gorilla_gorilla
ENSIPUG00000004876	ddx20	100	57.143	ENSHBUG00000007853	ddx20	100	56.832	Haplochromis_burtoni
ENSIPUG00000004876	ddx20	99	50.307	ENSHGLG00000014848	DDX20	95	50.920	Heterocephalus_glaber_female
ENSIPUG00000004876	ddx20	99	50.307	ENSHGLG00100003740	DDX20	95	50.920	Heterocephalus_glaber_male
ENSIPUG00000004876	ddx20	99	57.001	ENSHCOG00000001915	ddx20	73	70.945	Hippocampus_comes
ENSIPUG00000004876	ddx20	99	50.670	ENSSTOG00000029089	DDX20	70	62.176	Ictidomys_tridecemlineatus
ENSIPUG00000004876	ddx20	99	50.241	ENSJJAG00000011198	Ddx20	71	61.395	Jaculus_jaculus
ENSIPUG00000004876	ddx20	71	71.708	ENSKMAG00000019022	ddx20	72	71.708	Kryptolebias_marmoratus
ENSIPUG00000004876	ddx20	99	57.230	ENSLBEG00000019194	ddx20	98	57.805	Labrus_bergylta
ENSIPUG00000004876	ddx20	100	52.415	ENSLACG00000018491	DDX20	99	52.465	Latimeria_chalumnae
ENSIPUG00000004876	ddx20	69	69.772	ENSLOCG00000010372	ddx20	72	69.772	Lepisosteus_oculatus
ENSIPUG00000004876	ddx20	69	60.348	ENSLAFG00000014646	DDX20	72	60.348	Loxodonta_africana
ENSIPUG00000004876	ddx20	69	61.329	ENSMFAG00000031755	DDX20	70	61.329	Macaca_fascicularis
ENSIPUG00000004876	ddx20	69	61.054	ENSMNEG00000005757	DDX20	70	61.054	Macaca_nemestrina
ENSIPUG00000004876	ddx20	69	61.329	ENSMLEG00000005722	DDX20	70	61.329	Mandrillus_leucophaeus
ENSIPUG00000004876	ddx20	99	56.413	ENSMAMG00000009654	ddx20	99	57.023	Mastacembelus_armatus
ENSIPUG00000004876	ddx20	100	57.143	ENSMZEG00005027081	ddx20	100	56.832	Maylandia_zebra
ENSIPUG00000004876	ddx20	81	63.964	ENSMGAG00000004624	DDX20	98	59.157	Meleagris_gallopavo
ENSIPUG00000004876	ddx20	69	62.003	ENSMAUG00000010659	Ddx20	70	62.003	Mesocricetus_auratus
ENSIPUG00000004876	ddx20	70	61.750	ENSMICG00000011509	DDX20	71	61.750	Microcebus_murinus
ENSIPUG00000004876	ddx20	99	49.636	ENSMOCG00000012954	Ddx20	70	60.825	Microtus_ochrogaster
ENSIPUG00000004876	ddx20	99	56.931	ENSMMOG00000013103	ddx20	73	71.174	Mola_mola
ENSIPUG00000004876	ddx20	99	50.907	ENSMODG00000001311	DDX20	94	49.881	Monodelphis_domestica
ENSIPUG00000004876	ddx20	99	56.401	ENSMALG00000010740	ddx20	97	56.401	Monopterus_albus
ENSIPUG00000004876	ddx20	69	61.525	MGP_CAROLIEiJ_G0025474	Ddx20	70	61.538	Mus_caroli
ENSIPUG00000004876	ddx20	69	61.709	ENSMUSG00000027905	Ddx20	70	61.709	Mus_musculus
ENSIPUG00000004876	ddx20	99	50.421	MGP_PahariEiJ_G0026919	Ddx20	69	61.880	Mus_pahari
ENSIPUG00000004876	ddx20	69	61.274	MGP_SPRETEiJ_G0026423	Ddx20	70	61.274	Mus_spretus
ENSIPUG00000004876	ddx20	99	50.424	ENSMPUG00000004921	DDX20	70	62.045	Mustela_putorius_furo
ENSIPUG00000004876	ddx20	88	47.196	ENSMLUG00000009676	DDX20	99	48.016	Myotis_lucifugus
ENSIPUG00000004876	ddx20	99	49.880	ENSNGAG00000022953	Ddx20	70	61.391	Nannospalax_galili
ENSIPUG00000004876	ddx20	100	57.040	ENSNBRG00000020244	ddx20	100	56.558	Neolamprologus_brichardi
ENSIPUG00000004876	ddx20	99	50.660	ENSNLEG00000004040	DDX20	70	61.775	Nomascus_leucogenys
ENSIPUG00000004876	ddx20	52	68.681	ENSMEUG00000013459	-	51	68.681	Notamacropus_eugenii
ENSIPUG00000004876	ddx20	62	76.615	ENSOPRG00000004035	DDX20	78	76.615	Ochotona_princeps
ENSIPUG00000004876	ddx20	70	71.658	ENSONIG00000012436	ddx20	74	71.530	Oreochromis_niloticus
ENSIPUG00000004876	ddx20	62	62.548	ENSOANG00000003318	DDX20	81	62.500	Ornithorhynchus_anatinus
ENSIPUG00000004876	ddx20	69	62.457	ENSOCUG00000025939	DDX20	70	62.628	Oryctolagus_cuniculus
ENSIPUG00000004876	ddx20	99	58.765	ENSORLG00000008949	ddx20	99	58.780	Oryzias_latipes
ENSIPUG00000004876	ddx20	99	58.940	ENSORLG00020003852	ddx20	99	59.410	Oryzias_latipes_hni
ENSIPUG00000004876	ddx20	99	58.693	ENSORLG00015020167	ddx20	74	73.675	Oryzias_latipes_hsok
ENSIPUG00000004876	ddx20	99	58.415	ENSOMEG00000013657	ddx20	99	58.242	Oryzias_melastigma
ENSIPUG00000004876	ddx20	69	62.435	ENSOGAG00000010503	DDX20	70	62.435	Otolemur_garnettii
ENSIPUG00000004876	ddx20	99	50.969	ENSOARG00000019651	DDX20	70	62.414	Ovis_aries
ENSIPUG00000004876	ddx20	69	61.604	ENSPPAG00000031680	DDX20	70	61.604	Pan_paniscus
ENSIPUG00000004876	ddx20	99	51.157	ENSPPRG00000022979	DDX20	70	62.392	Panthera_pardus
ENSIPUG00000004876	ddx20	69	61.604	ENSPTRG00000001105	DDX20	70	61.604	Pan_troglodytes
ENSIPUG00000004876	ddx20	69	61.329	ENSPANG00000017985	DDX20	70	61.329	Papio_anubis
ENSIPUG00000004876	ddx20	67	67.420	ENSPKIG00000020161	ddx20	72	67.420	Paramormyrops_kingsleyae
ENSIPUG00000004876	ddx20	92	50.970	ENSPSIG00000003636	DDX20	71	63.846	Pelodiscus_sinensis
ENSIPUG00000004876	ddx20	99	56.485	ENSPMGG00000005966	ddx20	72	70.455	Periophthalmus_magnuspinnatus
ENSIPUG00000004876	ddx20	69	61.658	ENSPEMG00000019595	Ddx20	70	61.831	Peromyscus_maniculatus_bairdii
ENSIPUG00000004876	ddx20	99	50.771	ENSPCIG00000027721	DDX20	83	59.815	Phascolarctos_cinereus
ENSIPUG00000004876	ddx20	99	56.495	ENSPFOG00000010540	ddx20	99	56.740	Poecilia_formosa
ENSIPUG00000004876	ddx20	99	56.773	ENSPLAG00000009925	ddx20	99	56.724	Poecilia_latipinna
ENSIPUG00000004876	ddx20	99	56.933	ENSPMEG00000005998	ddx20	99	56.691	Poecilia_mexicana
ENSIPUG00000004876	ddx20	99	57.531	ENSPREG00000018837	ddx20	99	56.683	Poecilia_reticulata
ENSIPUG00000004876	ddx20	69	61.604	ENSPPYG00000001026	DDX20	70	61.604	Pongo_abelii
ENSIPUG00000004876	ddx20	69	61.750	ENSPCOG00000025185	DDX20	70	61.921	Propithecus_coquereli
ENSIPUG00000004876	ddx20	70	62.414	ENSPVAG00000004664	DDX20	70	62.414	Pteropus_vampyrus
ENSIPUG00000004876	ddx20	100	56.220	ENSPNYG00000014433	ddx20	100	56.711	Pundamilia_nyererei
ENSIPUG00000004876	ddx20	100	71.779	ENSPNAG00000018148	ddx20	100	72.025	Pygocentrus_nattereri
ENSIPUG00000004876	ddx20	69	61.274	ENSRNOG00000015274	Ddx20	70	61.962	Rattus_norvegicus
ENSIPUG00000004876	ddx20	69	61.578	ENSRBIG00000030629	DDX20	70	61.158	Rhinopithecus_bieti
ENSIPUG00000004876	ddx20	69	61.578	ENSRROG00000030608	DDX20	70	61.158	Rhinopithecus_roxellana
ENSIPUG00000004876	ddx20	69	61.433	ENSSBOG00000024789	DDX20	70	61.433	Saimiri_boliviensis_boliviensis
ENSIPUG00000004876	ddx20	88	48.529	ENSSHAG00000014518	DDX20	99	47.200	Sarcophilus_harrisii
ENSIPUG00000004876	ddx20	99	55.762	ENSSFOG00015008354	ddx20	99	55.390	Scleropages_formosus
ENSIPUG00000004876	ddx20	70	70.826	ENSSMAG00000007498	ddx20	99	55.006	Scophthalmus_maximus
ENSIPUG00000004876	ddx20	99	58.663	ENSSDUG00000015980	ddx20	74	70.609	Seriola_dumerili
ENSIPUG00000004876	ddx20	99	58.537	ENSSLDG00000000437	ddx20	93	57.927	Seriola_lalandi_dorsalis
ENSIPUG00000004876	ddx20	92	43.065	ENSSARG00000013569	DDX20	87	42.484	Sorex_araneus
ENSIPUG00000004876	ddx20	99	57.401	ENSSPAG00000020022	ddx20	97	57.091	Stegastes_partitus
ENSIPUG00000004876	ddx20	99	50.670	ENSSSCG00000006783	DDX20	69	62.284	Sus_scrofa
ENSIPUG00000004876	ddx20	79	57.751	ENSTGUG00000013660	DDX20	89	59.520	Taeniopygia_guttata
ENSIPUG00000004876	ddx20	71	69.792	ENSTRUG00000023712	ddx20	99	56.511	Takifugu_rubripes
ENSIPUG00000004876	ddx20	99	57.985	ENSTNIG00000019425	ddx20	100	57.740	Tetraodon_nigroviridis
ENSIPUG00000004876	ddx20	52	75.000	ENSTTRG00000005131	DDX20	54	75.000	Tursiops_truncatus
ENSIPUG00000004876	ddx20	99	48.171	ENSUAMG00000018924	DDX20	95	49.146	Ursus_americanus
ENSIPUG00000004876	ddx20	62	59.961	ENSUMAG00000013897	DDX20	65	60.155	Ursus_maritimus
ENSIPUG00000004876	ddx20	69	62.674	ENSVPAG00000010031	DDX20	70	62.674	Vicugna_pacos
ENSIPUG00000004876	ddx20	99	50.243	ENSVVUG00000016236	DDX20	95	50.607	Vulpes_vulpes
ENSIPUG00000004876	ddx20	74	64.685	ENSXETG00000013568	ddx20	81	64.643	Xenopus_tropicalis
ENSIPUG00000004876	ddx20	99	56.495	ENSXCOG00000007952	ddx20	98	56.258	Xiphophorus_couchianus
ENSIPUG00000004876	ddx20	99	57.213	ENSXMAG00000007573	ddx20	99	56.601	Xiphophorus_maculatus