EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000004885 (Gene tree)
Gene ID: -
Gene Symbol: ptrhd1
Alias: si:dkey-34f16.5
Full Name: peptidyl-tRNA hydrolase domain containing 1
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 4185 bases
Position: chr2:29951026-29955210
Accession: 108279518
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000007049	PTH2	PF01981.16	1.8e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000007358	-	360	XM_017493828	ENSIPUP00000007049	119 (aa)	XP_017349317	-

Gene Model

Click here to download ENSIPUG00000004885's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000004885's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000004885	ptrhd1	97	56.034	ENSG00000184924	PTRHD1	83	56.034	Homo_sapiens
ENSIPUG00000004885	ptrhd1	98	75.214	ENSAPOG00000024433	ptrhd1	93	75.214	Acanthochromis_polyacanthus
ENSIPUG00000004885	ptrhd1	97	56.034	ENSAMEG00000002651	PTRHD1	83	56.034	Ailuropoda_melanoleuca
ENSIPUG00000004885	ptrhd1	98	76.068	ENSACIG00000002596	ptrhd1	93	76.068	Amphilophus_citrinellus
ENSIPUG00000004885	ptrhd1	98	75.214	ENSAOCG00000007632	ptrhd1	93	75.214	Amphiprion_ocellaris
ENSIPUG00000004885	ptrhd1	98	75.214	ENSAPEG00000011491	ptrhd1	93	75.214	Amphiprion_percula
ENSIPUG00000004885	ptrhd1	98	76.068	ENSATEG00000019199	ptrhd1	93	76.068	Anabas_testudineus
ENSIPUG00000004885	ptrhd1	97	56.034	ENSANAG00000019089	PTRHD1	83	56.034	Aotus_nancymaae
ENSIPUG00000004885	ptrhd1	98	76.923	ENSACLG00000000814	ptrhd1	93	76.923	Astatotilapia_calliptera
ENSIPUG00000004885	ptrhd1	97	81.739	ENSAMXG00000034266	ptrhd1	80	81.739	Astyanax_mexicanus
ENSIPUG00000004885	ptrhd1	97	58.621	ENSBTAG00000015012	PTRHD1	83	58.621	Bos_taurus
ENSIPUG00000004885	ptrhd1	95	50.442	WBGene00050885	Y94H6A.12	100	48.387	Caenorhabditis_elegans
ENSIPUG00000004885	ptrhd1	97	55.172	ENSCJAG00000008012	PTRHD1	83	55.172	Callithrix_jacchus
ENSIPUG00000004885	ptrhd1	97	56.897	ENSCAFG00000024865	PTRHD1	83	56.897	Canis_familiaris
ENSIPUG00000004885	ptrhd1	97	58.621	ENSCHIG00000014757	PTRHD1	83	58.621	Capra_hircus
ENSIPUG00000004885	ptrhd1	97	55.172	ENSTSYG00000009995	PTRHD1	83	55.172	Carlito_syrichta
ENSIPUG00000004885	ptrhd1	97	56.034	ENSCPOG00000005561	PTRHD1	83	56.034	Cavia_porcellus
ENSIPUG00000004885	ptrhd1	97	56.034	ENSCCAG00000033856	PTRHD1	83	56.034	Cebus_capucinus
ENSIPUG00000004885	ptrhd1	97	55.652	ENSCATG00000033690	PTRHD1	83	55.652	Cercocebus_atys
ENSIPUG00000004885	ptrhd1	97	56.897	ENSCLAG00000006505	PTRHD1	80	56.897	Chinchilla_lanigera
ENSIPUG00000004885	ptrhd1	97	56.034	ENSCSAG00000008490	PTRHD1	83	56.034	Chlorocebus_sabaeus
ENSIPUG00000004885	ptrhd1	97	45.217	ENSCHOG00000001920	PTRHD1	84	45.217	Choloepus_hoffmanni
ENSIPUG00000004885	ptrhd1	97	56.034	ENSCPBG00000022276	PTRHD1	82	56.034	Chrysemys_picta_bellii
ENSIPUG00000004885	ptrhd1	97	58.261	ENSCING00000019647	-	97	58.261	Ciona_intestinalis
ENSIPUG00000004885	ptrhd1	97	56.034	ENSCANG00000034444	PTRHD1	83	56.034	Colobus_angolensis_palliatus
ENSIPUG00000004885	ptrhd1	97	55.172	ENSCGRG00001003289	Ptrhd1	55	55.172	Cricetulus_griseus_chok1gshd
ENSIPUG00000004885	ptrhd1	97	55.172	ENSCGRG00000011834	Ptrhd1	83	55.172	Cricetulus_griseus_crigri
ENSIPUG00000004885	ptrhd1	98	75.424	ENSCSEG00000006943	ptrhd1	93	75.424	Cynoglossus_semilaevis
ENSIPUG00000004885	ptrhd1	98	76.923	ENSCVAG00000016345	ptrhd1	93	76.923	Cyprinodon_variegatus
ENSIPUG00000004885	ptrhd1	97	81.897	ENSDARG00000016122	ptrhd1	92	81.897	Danio_rerio
ENSIPUG00000004885	ptrhd1	97	55.172	ENSDNOG00000043646	PTRHD1	77	55.172	Dasypus_novemcinctus
ENSIPUG00000004885	ptrhd1	97	56.034	ENSDORG00000026776	Ptrhd1	83	56.034	Dipodomys_ordii
ENSIPUG00000004885	ptrhd1	98	64.103	FBgn0038446	CG14903	98	64.103	Drosophila_melanogaster
ENSIPUG00000004885	ptrhd1	50	56.667	ENSETEG00000001615	-	71	56.667	Echinops_telfairi
ENSIPUG00000004885	ptrhd1	97	47.826	ENSETEG00000009379	-	85	47.826	Echinops_telfairi
ENSIPUG00000004885	ptrhd1	100	57.983	ENSEBUG00000002249	ptrhd1	98	57.983	Eptatretus_burgeri
ENSIPUG00000004885	ptrhd1	97	41.379	ENSEASG00005001302	-	82	41.379	Equus_asinus_asinus
ENSIPUG00000004885	ptrhd1	97	55.172	ENSECAG00000017730	PTRHD1	83	55.172	Equus_caballus
ENSIPUG00000004885	ptrhd1	97	41.379	ENSECAG00000005314	-	79	41.379	Equus_caballus
ENSIPUG00000004885	ptrhd1	97	54.310	ENSEEUG00000004263	PTRHD1	83	54.310	Erinaceus_europaeus
ENSIPUG00000004885	ptrhd1	97	80.172	ENSELUG00000003837	ptrhd1	92	80.172	Esox_lucius
ENSIPUG00000004885	ptrhd1	97	56.034	ENSFCAG00000003648	PTRHD1	83	56.034	Felis_catus
ENSIPUG00000004885	ptrhd1	97	56.034	ENSFDAG00000004017	PTRHD1	83	56.034	Fukomys_damarensis
ENSIPUG00000004885	ptrhd1	98	76.068	ENSFHEG00000009135	ptrhd1	93	76.068	Fundulus_heteroclitus
ENSIPUG00000004885	ptrhd1	97	57.391	ENSGALG00000016610	PTRHD1	82	57.391	Gallus_gallus
ENSIPUG00000004885	ptrhd1	98	75.214	ENSGAFG00000005717	ptrhd1	93	75.214	Gambusia_affinis
ENSIPUG00000004885	ptrhd1	98	76.068	ENSGACG00000006743	ptrhd1	92	76.068	Gasterosteus_aculeatus
ENSIPUG00000004885	ptrhd1	97	56.897	ENSGAGG00000023951	PTRHD1	91	56.897	Gopherus_agassizii
ENSIPUG00000004885	ptrhd1	97	55.172	ENSGGOG00000043870	PTRHD1	92	55.172	Gorilla_gorilla
ENSIPUG00000004885	ptrhd1	98	76.923	ENSHBUG00000014289	ptrhd1	93	76.923	Haplochromis_burtoni
ENSIPUG00000004885	ptrhd1	97	56.897	ENSHGLG00000008203	PTRHD1	83	56.897	Heterocephalus_glaber_female
ENSIPUG00000004885	ptrhd1	97	55.172	ENSHGLG00100004341	-	85	55.172	Heterocephalus_glaber_male
ENSIPUG00000004885	ptrhd1	97	56.034	ENSHGLG00100012553	PTRHD1	83	56.034	Heterocephalus_glaber_male
ENSIPUG00000004885	ptrhd1	98	76.068	ENSHCOG00000013504	ptrhd1	92	76.068	Hippocampus_comes
ENSIPUG00000004885	ptrhd1	97	56.897	ENSSTOG00000006030	PTRHD1	83	56.897	Ictidomys_tridecemlineatus
ENSIPUG00000004885	ptrhd1	97	58.621	ENSJJAG00000024180	Ptrhd1	84	58.621	Jaculus_jaculus
ENSIPUG00000004885	ptrhd1	94	76.786	ENSKMAG00000016961	ptrhd1	99	76.786	Kryptolebias_marmoratus
ENSIPUG00000004885	ptrhd1	98	77.778	ENSLBEG00000024406	ptrhd1	93	77.778	Labrus_bergylta
ENSIPUG00000004885	ptrhd1	90	68.224	ENSLACG00000018052	PTRHD1	94	66.102	Latimeria_chalumnae
ENSIPUG00000004885	ptrhd1	97	80.000	ENSLOCG00000015890	ptrhd1	90	80.000	Lepisosteus_oculatus
ENSIPUG00000004885	ptrhd1	97	58.621	ENSLAFG00000014453	PTRHD1	83	58.621	Loxodonta_africana
ENSIPUG00000004885	ptrhd1	97	55.172	ENSMFAG00000040267	PTRHD1	83	55.172	Macaca_fascicularis
ENSIPUG00000004885	ptrhd1	97	55.172	ENSMMUG00000009598	PTRHD1	83	55.172	Macaca_mulatta
ENSIPUG00000004885	ptrhd1	97	55.172	ENSMNEG00000035044	PTRHD1	83	55.172	Macaca_nemestrina
ENSIPUG00000004885	ptrhd1	97	53.913	ENSMLEG00000030314	PTRHD1	83	53.913	Mandrillus_leucophaeus
ENSIPUG00000004885	ptrhd1	98	76.068	ENSMAMG00000021201	ptrhd1	93	76.068	Mastacembelus_armatus
ENSIPUG00000004885	ptrhd1	98	76.923	ENSMZEG00005021808	ptrhd1	93	76.923	Maylandia_zebra
ENSIPUG00000004885	ptrhd1	97	57.759	ENSMAUG00000019251	Ptrhd1	83	57.759	Mesocricetus_auratus
ENSIPUG00000004885	ptrhd1	97	57.759	ENSMICG00000001578	PTRHD1	83	57.759	Microcebus_murinus
ENSIPUG00000004885	ptrhd1	97	56.034	ENSMOCG00000001204	Ptrhd1	83	56.034	Microtus_ochrogaster
ENSIPUG00000004885	ptrhd1	98	75.214	ENSMMOG00000015284	ptrhd1	93	75.214	Mola_mola
ENSIPUG00000004885	ptrhd1	97	56.034	ENSMODG00000015895	PTRHD1	85	56.034	Monodelphis_domestica
ENSIPUG00000004885	ptrhd1	98	76.923	ENSMALG00000003471	ptrhd1	93	76.923	Monopterus_albus
ENSIPUG00000004885	ptrhd1	97	56.897	MGP_CAROLIEiJ_G0017582	Ptrhd1	83	56.897	Mus_caroli
ENSIPUG00000004885	ptrhd1	97	56.897	ENSMUSG00000096199	Ptrhd1	83	56.897	Mus_musculus
ENSIPUG00000004885	ptrhd1	97	56.897	MGP_SPRETEiJ_G0018426	Ptrhd1	83	56.897	Mus_spretus
ENSIPUG00000004885	ptrhd1	97	56.897	ENSMPUG00000014016	PTRHD1	83	56.897	Mustela_putorius_furo
ENSIPUG00000004885	ptrhd1	97	56.897	ENSMLUG00000014127	PTRHD1	83	56.897	Myotis_lucifugus
ENSIPUG00000004885	ptrhd1	97	57.759	ENSNGAG00000016335	Ptrhd1	83	57.759	Nannospalax_galili
ENSIPUG00000004885	ptrhd1	98	76.923	ENSNBRG00000009690	ptrhd1	93	76.923	Neolamprologus_brichardi
ENSIPUG00000004885	ptrhd1	97	56.034	ENSNLEG00000000990	PTRHD1	83	56.034	Nomascus_leucogenys
ENSIPUG00000004885	ptrhd1	50	58.333	ENSMEUG00000010482	-	72	58.333	Notamacropus_eugenii
ENSIPUG00000004885	ptrhd1	97	58.621	ENSOPRG00000008600	PTRHD1	83	58.621	Ochotona_princeps
ENSIPUG00000004885	ptrhd1	97	56.897	ENSODEG00000007805	PTRHD1	80	56.897	Octodon_degus
ENSIPUG00000004885	ptrhd1	98	76.923	ENSONIG00000015722	ptrhd1	86	76.923	Oreochromis_niloticus
ENSIPUG00000004885	ptrhd1	97	57.759	ENSOCUG00000015432	PTRHD1	83	57.759	Oryctolagus_cuniculus
ENSIPUG00000004885	ptrhd1	97	73.504	ENSORLG00000028768	ptrhd1	99	73.504	Oryzias_latipes
ENSIPUG00000004885	ptrhd1	97	73.504	ENSORLG00020002857	ptrhd1	99	73.504	Oryzias_latipes_hni
ENSIPUG00000004885	ptrhd1	97	73.504	ENSORLG00015018271	ptrhd1	100	73.504	Oryzias_latipes_hsok
ENSIPUG00000004885	ptrhd1	97	71.552	ENSOMEG00000017594	ptrhd1	91	71.552	Oryzias_melastigma
ENSIPUG00000004885	ptrhd1	97	54.310	ENSOGAG00000000756	PTRHD1	83	54.310	Otolemur_garnettii
ENSIPUG00000004885	ptrhd1	97	58.621	ENSOARG00000018052	PTRHD1	83	58.621	Ovis_aries
ENSIPUG00000004885	ptrhd1	97	56.034	ENSPPAG00000035395	PTRHD1	83	56.034	Pan_paniscus
ENSIPUG00000004885	ptrhd1	97	56.034	ENSPPRG00000022961	PTRHD1	83	56.034	Panthera_pardus
ENSIPUG00000004885	ptrhd1	97	56.034	ENSPTIG00000012136	PTRHD1	83	56.034	Panthera_tigris_altaica
ENSIPUG00000004885	ptrhd1	97	56.034	ENSPTRG00000011716	PTRHD1	83	56.034	Pan_troglodytes
ENSIPUG00000004885	ptrhd1	97	55.172	ENSPANG00000006781	PTRHD1	83	55.172	Papio_anubis
ENSIPUG00000004885	ptrhd1	97	78.448	ENSPKIG00000015207	ptrhd1	79	78.448	Paramormyrops_kingsleyae
ENSIPUG00000004885	ptrhd1	97	77.586	ENSPMGG00000020297	ptrhd1	93	77.778	Periophthalmus_magnuspinnatus
ENSIPUG00000004885	ptrhd1	92	64.545	ENSPMAG00000007352	ptrhd1	94	65.546	Petromyzon_marinus
ENSIPUG00000004885	ptrhd1	97	56.034	ENSPCIG00000025242	PTRHD1	92	56.034	Phascolarctos_cinereus
ENSIPUG00000004885	ptrhd1	98	74.359	ENSPFOG00000004468	ptrhd1	83	74.359	Poecilia_formosa
ENSIPUG00000004885	ptrhd1	98	74.359	ENSPLAG00000018019	ptrhd1	93	74.359	Poecilia_latipinna
ENSIPUG00000004885	ptrhd1	98	75.214	ENSPMEG00000001321	ptrhd1	93	75.214	Poecilia_mexicana
ENSIPUG00000004885	ptrhd1	98	75.214	ENSPREG00000017624	ptrhd1	93	75.214	Poecilia_reticulata
ENSIPUG00000004885	ptrhd1	97	56.897	ENSPPYG00000012597	PTRHD1	83	56.897	Pongo_abelii
ENSIPUG00000004885	ptrhd1	97	58.621	ENSPCAG00000007535	PTRHD1	83	58.621	Procavia_capensis
ENSIPUG00000004885	ptrhd1	97	56.897	ENSPCOG00000003110	PTRHD1	83	56.897	Propithecus_coquereli
ENSIPUG00000004885	ptrhd1	97	56.897	ENSPVAG00000017514	PTRHD1	83	56.897	Pteropus_vampyrus
ENSIPUG00000004885	ptrhd1	98	76.923	ENSPNYG00000016755	ptrhd1	93	76.923	Pundamilia_nyererei
ENSIPUG00000004885	ptrhd1	97	83.621	ENSPNAG00000028214	ptrhd1	91	83.621	Pygocentrus_nattereri
ENSIPUG00000004885	ptrhd1	97	57.759	ENSRNOG00000004059	Ptrhd1	83	57.759	Rattus_norvegicus
ENSIPUG00000004885	ptrhd1	97	56.034	ENSRBIG00000032190	PTRHD1	83	56.034	Rhinopithecus_bieti
ENSIPUG00000004885	ptrhd1	97	56.034	ENSRROG00000029627	PTRHD1	83	56.034	Rhinopithecus_roxellana
ENSIPUG00000004885	ptrhd1	97	56.897	ENSSBOG00000031751	PTRHD1	83	56.897	Saimiri_boliviensis_boliviensis
ENSIPUG00000004885	ptrhd1	97	55.172	ENSSHAG00000005774	PTRHD1	75	55.172	Sarcophilus_harrisii
ENSIPUG00000004885	ptrhd1	97	77.586	ENSSFOG00015000526	ptrhd1	95	77.586	Scleropages_formosus
ENSIPUG00000004885	ptrhd1	97	76.724	ENSSMAG00000004450	ptrhd1	92	76.923	Scophthalmus_maximus
ENSIPUG00000004885	ptrhd1	98	77.778	ENSSDUG00000004610	ptrhd1	79	77.778	Seriola_dumerili
ENSIPUG00000004885	ptrhd1	98	77.778	ENSSLDG00000006231	ptrhd1	93	77.778	Seriola_lalandi_dorsalis
ENSIPUG00000004885	ptrhd1	97	57.759	ENSSPUG00000002905	PTRHD1	87	57.759	Sphenodon_punctatus
ENSIPUG00000004885	ptrhd1	98	76.068	ENSSPAG00000000997	ptrhd1	93	76.068	Stegastes_partitus
ENSIPUG00000004885	ptrhd1	84	47.000	ENSSSCG00000040441	-	80	47.000	Sus_scrofa
ENSIPUG00000004885	ptrhd1	100	56.667	ENSTGUG00000015169	-	88	56.667	Taeniopygia_guttata
ENSIPUG00000004885	ptrhd1	98	71.795	ENSTRUG00000007201	ptrhd1	93	71.795	Takifugu_rubripes
ENSIPUG00000004885	ptrhd1	98	75.214	ENSTNIG00000019143	ptrhd1	93	75.214	Tetraodon_nigroviridis
ENSIPUG00000004885	ptrhd1	84	57.000	ENSTTRG00000015128	PTRHD1	71	57.000	Tursiops_truncatus
ENSIPUG00000004885	ptrhd1	97	56.897	ENSUAMG00000007305	PTRHD1	83	56.897	Ursus_americanus
ENSIPUG00000004885	ptrhd1	99	56.303	ENSVPAG00000005556	PTRHD1	83	56.897	Vicugna_pacos
ENSIPUG00000004885	ptrhd1	89	65.094	ENSXETG00000021176	ptrhd1	84	64.957	Xenopus_tropicalis
ENSIPUG00000004885	ptrhd1	98	75.214	ENSXCOG00000019083	ptrhd1	93	75.214	Xiphophorus_couchianus
ENSIPUG00000004885	ptrhd1	98	75.214	ENSXMAG00000024458	ptrhd1	93	75.214	Xiphophorus_maculatus