EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000005007 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 5223 bases
Position: chr4:23523209-23528431
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000007245	RVT_1	PF00078.27	1.6e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000007560	-	1074	-	ENSIPUP00000007245	357 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000005007's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000005007's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000005007	-	89	84.591	ENSIPUG00000002922	-	83	84.591
ENSIPUG00000005007	-	90	92.260	ENSIPUG00000013500	-	83	92.260
ENSIPUG00000005007	-	71	92.941	ENSIPUG00000000982	-	66	91.860
ENSIPUG00000005007	-	65	92.704	ENSIPUG00000008041	-	80	92.704

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000005007	-	98	42.655	ENSAPEG00000022086	-	82	42.655	Amphiprion_percula
ENSIPUG00000005007	-	53	46.809	ENSORLG00000028489	-	73	46.809	Oryzias_latipes
ENSIPUG00000005007	-	53	46.277	ENSORLG00020011085	-	66	46.277	Oryzias_latipes_hni
ENSIPUG00000005007	-	89	45.741	ENSORLG00020003735	-	78	45.741	Oryzias_latipes_hni
ENSIPUG00000005007	-	82	44.966	ENSORLG00020009713	-	76	44.966	Oryzias_latipes_hni
ENSIPUG00000005007	-	53	45.745	ENSORLG00015019974	-	67	45.745	Oryzias_latipes_hsok
ENSIPUG00000005007	-	53	43.085	ENSORLG00015002242	-	67	43.085	Oryzias_latipes_hsok
ENSIPUG00000005007	-	53	46.277	ENSORLG00015009826	-	68	46.277	Oryzias_latipes_hsok
ENSIPUG00000005007	-	93	46.802	ENSSFOG00015014491	-	79	46.802	Scleropages_formosus
ENSIPUG00000005007	-	87	48.726	ENSSFOG00015000428	-	77	48.726	Scleropages_formosus
ENSIPUG00000005007	-	86	48.077	ENSSFOG00015015781	-	79	48.077	Scleropages_formosus