EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000005027 (Gene tree)
Gene ID: 100528371
Gene Symbol: if4e
Alias: -
Full Name: eukaryotic translation initiation factor 4e
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 8800 bases
Position: chr3:20864582-20873381
Accession: 100528371
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000007355	IF4E	PF01652.18	5.9e-57	1	1
ENSIPUP00000007344	IF4E	PF01652.18	7e-57	1	1
ENSIPUP00000007326	IF4E	PF01652.18	2.6e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000007674	-	2206	-	ENSIPUP00000007355	212 (aa)	-	E3TEU5
ENSIPUT00000007643	-	606	-	ENSIPUP00000007326	201 (aa)	-	-
ENSIPUT00000007660	-	3175	XM_017462579	ENSIPUP00000007344	227 (aa)	XP_017318068	-

Gene Model

Click here to download ENSIPUG00000005027's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03013	RNA transport	KEGG
ipu04150	mTOR signaling pathway	KEGG
ipu04910	Insulin signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000005027's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000005027	if4e	86	30.851	ENSIPUG00000007049	eif4e3	82	30.851
ENSIPUG00000005027	if4e	89	37.113	ENSIPUG00000018927	eif4e2	80	37.113
ENSIPUG00000005027	if4e	89	34.783	ENSIPUG00000003906	eif4e2rs1	54	37.158
ENSIPUG00000005027	if4e	89	71.429	ENSIPUG00000007404	eif4eb	73	66.667
ENSIPUG00000005027	if4e	100	67.593	ENSIPUG00000003156	eif4ea	100	67.593
ENSIPUG00000005027	if4e	92	64.362	ENSIPUG00000020654	eif4e1b	97	58.852

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000005027	if4e	100	88.679	ENSAPOG00000019534	eif4e1c	100	88.679	Acanthochromis_polyacanthus
ENSIPUG00000005027	if4e	87	94.286	ENSACIG00000021242	eif4e1c	99	93.258	Amphilophus_citrinellus
ENSIPUG00000005027	if4e	100	89.151	ENSAOCG00000004344	eif4e1c	100	89.151	Amphiprion_ocellaris
ENSIPUG00000005027	if4e	100	89.151	ENSAPEG00000013289	eif4e1c	100	89.151	Amphiprion_percula
ENSIPUG00000005027	if4e	100	87.264	ENSATEG00000001670	eif4e1c	99	91.192	Anabas_testudineus
ENSIPUG00000005027	if4e	100	88.679	ENSACLG00000011119	eif4e1c	100	88.679	Astatotilapia_calliptera
ENSIPUG00000005027	if4e	100	93.396	ENSAMXG00000029997	eif4e1c	100	93.396	Astyanax_mexicanus
ENSIPUG00000005027	if4e	91	52.850	WBGene00002061	ife-3	76	52.850	Caenorhabditis_elegans
ENSIPUG00000005027	if4e	96	88.235	ENSCSEG00000006680	eif4e1c	97	86.792	Cynoglossus_semilaevis
ENSIPUG00000005027	if4e	100	87.264	ENSCVAG00000013853	eif4e1c	100	87.264	Cyprinodon_variegatus
ENSIPUG00000005027	if4e	100	92.488	ENSDARG00000012274	eif4e1c	100	94.017	Danio_rerio
ENSIPUG00000005027	if4e	100	85.455	ENSELUG00000022791	eif4e1c	100	85.455	Esox_lucius
ENSIPUG00000005027	if4e	100	87.736	ENSFHEG00000002097	eif4e1c	100	87.736	Fundulus_heteroclitus
ENSIPUG00000005027	if4e	91	89.071	ENSGMOG00000006731	eif4e1c	94	88.542	Gadus_morhua
ENSIPUG00000005027	if4e	100	87.736	ENSGAFG00000009446	eif4e1c	100	87.736	Gambusia_affinis
ENSIPUG00000005027	if4e	99	86.256	ENSGACG00000007799	eif4e1c	100	91.453	Gasterosteus_aculeatus
ENSIPUG00000005027	if4e	100	88.679	ENSHBUG00000022939	eif4e1c	100	88.679	Haplochromis_burtoni
ENSIPUG00000005027	if4e	100	81.604	ENSHCOG00000004116	eif4e1c	100	81.604	Hippocampus_comes
ENSIPUG00000005027	if4e	100	85.849	ENSKMAG00000004557	eif4e1c	100	85.849	Kryptolebias_marmoratus
ENSIPUG00000005027	if4e	100	89.151	ENSLBEG00000007011	eif4e1c	100	89.151	Labrus_bergylta
ENSIPUG00000005027	if4e	98	65.888	ENSLACG00000015230	eif4e1c	98	65.888	Latimeria_chalumnae
ENSIPUG00000005027	if4e	100	90.094	ENSLOCG00000009334	eif4e1c	98	90.094	Lepisosteus_oculatus
ENSIPUG00000005027	if4e	100	87.264	ENSMAMG00000000450	eif4e1c	100	87.264	Mastacembelus_armatus
ENSIPUG00000005027	if4e	100	88.679	ENSMZEG00005027687	eif4e1c	100	88.679	Maylandia_zebra
ENSIPUG00000005027	if4e	100	85.377	ENSMMOG00000010487	eif4e1c	98	87.440	Mola_mola
ENSIPUG00000005027	if4e	100	84.906	ENSMALG00000018219	eif4e1c	100	84.906	Monopterus_albus
ENSIPUG00000005027	if4e	100	86.321	ENSNBRG00000020784	eif4e1c	98	86.321	Neolamprologus_brichardi
ENSIPUG00000005027	if4e	100	88.679	ENSONIG00000018400	eif4e1c	100	88.679	Oreochromis_niloticus
ENSIPUG00000005027	if4e	100	84.906	ENSORLG00000019400	eif4e1c	100	84.906	Oryzias_latipes
ENSIPUG00000005027	if4e	100	84.434	ENSORLG00020003856	eif4e1c	100	84.434	Oryzias_latipes_hni
ENSIPUG00000005027	if4e	100	84.434	ENSORLG00015009011	eif4e1c	100	84.434	Oryzias_latipes_hsok
ENSIPUG00000005027	if4e	100	86.792	ENSOMEG00000003911	eif4e1c	100	86.792	Oryzias_melastigma
ENSIPUG00000005027	if4e	99	86.667	ENSPKIG00000009484	eif4e1c	99	87.379	Paramormyrops_kingsleyae
ENSIPUG00000005027	if4e	99	85.714	ENSPMGG00000010390	eif4e1c	97	81.938	Periophthalmus_magnuspinnatus
ENSIPUG00000005027	if4e	100	87.264	ENSPFOG00000002854	eif4e1c	100	87.264	Poecilia_formosa
ENSIPUG00000005027	if4e	100	87.264	ENSPLAG00000009606	eif4e1c	100	87.264	Poecilia_latipinna
ENSIPUG00000005027	if4e	100	87.264	ENSPMEG00000003072	eif4e1c	100	87.264	Poecilia_mexicana
ENSIPUG00000005027	if4e	100	87.264	ENSPREG00000018571	eif4e1c	97	92.147	Poecilia_reticulata
ENSIPUG00000005027	if4e	100	88.208	ENSPNYG00000007444	eif4e1c	100	88.208	Pundamilia_nyererei
ENSIPUG00000005027	if4e	100	93.396	ENSPNAG00000027050	eif4e1c	100	93.396	Pygocentrus_nattereri
ENSIPUG00000005027	if4e	100	87.264	ENSSFOG00015002672	eif4e1c	100	87.264	Scleropages_formosus
ENSIPUG00000005027	if4e	100	87.736	ENSSMAG00000002255	eif4e1c	100	87.736	Scophthalmus_maximus
ENSIPUG00000005027	if4e	100	88.679	ENSSDUG00000009117	eif4e1c	100	88.679	Seriola_dumerili
ENSIPUG00000005027	if4e	100	88.679	ENSSLDG00000019869	eif4e1c	100	88.679	Seriola_lalandi_dorsalis
ENSIPUG00000005027	if4e	100	89.151	ENSSPAG00000021325	eif4e1c	88	89.151	Stegastes_partitus
ENSIPUG00000005027	if4e	100	85.377	ENSTRUG00000024897	eif4e1c	100	85.377	Takifugu_rubripes
ENSIPUG00000005027	if4e	100	75.000	ENSTNIG00000008670	eif4e1c	100	75.000	Tetraodon_nigroviridis
ENSIPUG00000005027	if4e	100	88.208	ENSXCOG00000012418	eif4e1c	100	88.208	Xiphophorus_couchianus
ENSIPUG00000005027	if4e	100	88.208	ENSXMAG00000023567	eif4e1c	100	88.208	Xiphophorus_maculatus