EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000005073 (Gene tree)
Gene ID: 108280593
Gene Symbol: nmd3
Alias: nmd3l|zgc:113103
Full Name: NMD3 ribosome export adaptor
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 13485 bases
Position: chr20:4559573-4573057
Accession: 108280593
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000007436	NMD3	PF04981.13	3.6e-81	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000007760	-	2275	XM_017495738	ENSIPUP00000007436	504 (aa)	XP_017351227	W5U7A4

Gene Model

Click here to download ENSIPUG00000005073's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03008	Ribosome biogenesis in eukaryotes	KEGG
ipu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000005073's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000005073	nmd3	99	78.571	ENSG00000169251	NMD3	100	81.651	Homo_sapiens
ENSIPUG00000005073	nmd3	100	85.913	ENSAPOG00000022912	nmd3	100	85.913	Acanthochromis_polyacanthus
ENSIPUG00000005073	nmd3	99	78.020	ENSAMEG00000001584	NMD3	99	78.020	Ailuropoda_melanoleuca
ENSIPUG00000005073	nmd3	100	83.532	ENSACIG00000015196	nmd3	100	83.532	Amphilophus_citrinellus
ENSIPUG00000005073	nmd3	100	86.508	ENSAOCG00000009086	nmd3	100	86.508	Amphiprion_ocellaris
ENSIPUG00000005073	nmd3	100	86.508	ENSAPEG00000000329	nmd3	100	86.508	Amphiprion_percula
ENSIPUG00000005073	nmd3	100	87.698	ENSATEG00000014351	nmd3	100	87.698	Anabas_testudineus
ENSIPUG00000005073	nmd3	100	76.634	ENSAPLG00000014786	NMD3	100	76.634	Anas_platyrhynchos
ENSIPUG00000005073	nmd3	100	82.178	ENSACAG00000007349	NMD3	100	82.178	Anolis_carolinensis
ENSIPUG00000005073	nmd3	99	78.156	ENSANAG00000026434	NMD3	99	78.156	Aotus_nancymaae
ENSIPUG00000005073	nmd3	100	88.095	ENSACLG00000015520	nmd3	100	88.095	Astatotilapia_calliptera
ENSIPUG00000005073	nmd3	100	90.476	ENSAMXG00000014415	nmd3	100	90.476	Astyanax_mexicanus
ENSIPUG00000005073	nmd3	99	78.373	ENSBTAG00000016228	NMD3	100	78.373	Bos_taurus
ENSIPUG00000005073	nmd3	96	48.381	WBGene00012030	T25G3.3	96	48.381	Caenorhabditis_elegans
ENSIPUG00000005073	nmd3	99	78.313	ENSCJAG00000002900	NMD3	97	78.313	Callithrix_jacchus
ENSIPUG00000005073	nmd3	99	78.514	ENSCAFG00000014352	NMD3	97	78.514	Canis_familiaris
ENSIPUG00000005073	nmd3	99	78.175	ENSCAFG00020021145	NMD3	99	78.175	Canis_lupus_dingo
ENSIPUG00000005073	nmd3	99	78.175	ENSCHIG00000016015	NMD3	100	78.175	Capra_hircus
ENSIPUG00000005073	nmd3	99	78.968	ENSTSYG00000002155	NMD3	99	78.968	Carlito_syrichta
ENSIPUG00000005073	nmd3	79	78.250	ENSCAPG00000017861	NMD3	93	78.250	Cavia_aperea
ENSIPUG00000005073	nmd3	87	78.947	ENSCPOG00000005953	NMD3	94	78.947	Cavia_porcellus
ENSIPUG00000005073	nmd3	99	78.175	ENSCCAG00000037460	NMD3	100	78.175	Cebus_capucinus
ENSIPUG00000005073	nmd3	99	78.373	ENSCATG00000030022	NMD3	100	78.373	Cercocebus_atys
ENSIPUG00000005073	nmd3	99	79.563	ENSCLAG00000003155	NMD3	100	79.563	Chinchilla_lanigera
ENSIPUG00000005073	nmd3	99	78.373	ENSCSAG00000012333	NMD3	100	78.373	Chlorocebus_sabaeus
ENSIPUG00000005073	nmd3	80	77.465	ENSCHOG00000001240	NMD3	80	77.465	Choloepus_hoffmanni
ENSIPUG00000005073	nmd3	99	82.341	ENSCPBG00000018318	NMD3	99	82.700	Chrysemys_picta_bellii
ENSIPUG00000005073	nmd3	97	53.252	ENSCING00000002129	-	97	53.252	Ciona_intestinalis
ENSIPUG00000005073	nmd3	87	53.636	ENSCSAVG00000001120	-	97	53.636	Ciona_savignyi
ENSIPUG00000005073	nmd3	99	73.360	ENSCANG00000042939	NMD3	95	73.360	Colobus_angolensis_palliatus
ENSIPUG00000005073	nmd3	91	70.870	ENSCGRG00001001792	Nmd3	96	70.870	Cricetulus_griseus_chok1gshd
ENSIPUG00000005073	nmd3	97	79.022	ENSCGRG00000007947	Nmd3	98	79.022	Cricetulus_griseus_crigri
ENSIPUG00000005073	nmd3	100	86.706	ENSCSEG00000017954	nmd3	100	86.706	Cynoglossus_semilaevis
ENSIPUG00000005073	nmd3	100	78.373	ENSCVAG00000004672	nmd3	100	78.571	Cyprinodon_variegatus
ENSIPUG00000005073	nmd3	100	84.356	ENSDARG00000015676	nmd3	100	84.356	Danio_rerio
ENSIPUG00000005073	nmd3	99	77.183	ENSDNOG00000045222	NMD3	100	77.183	Dasypus_novemcinctus
ENSIPUG00000005073	nmd3	97	71.166	ENSDORG00000005716	Nmd3	100	68.421	Dipodomys_ordii
ENSIPUG00000005073	nmd3	98	52.104	FBgn0023542	Nmd3	95	52.104	Drosophila_melanogaster
ENSIPUG00000005073	nmd3	99	68.651	ENSETEG00000003168	NMD3	99	68.651	Echinops_telfairi
ENSIPUG00000005073	nmd3	89	56.347	ENSEBUG00000014316	nmd3	97	56.347	Eptatretus_burgeri
ENSIPUG00000005073	nmd3	99	77.976	ENSEASG00005018672	NMD3	100	77.976	Equus_asinus_asinus
ENSIPUG00000005073	nmd3	99	78.313	ENSECAG00000000188	NMD3	97	78.313	Equus_caballus
ENSIPUG00000005073	nmd3	94	57.203	ENSEEUG00000010642	-	100	57.203	Erinaceus_europaeus
ENSIPUG00000005073	nmd3	100	86.310	ENSELUG00000024123	nmd3	100	86.310	Esox_lucius
ENSIPUG00000005073	nmd3	99	78.313	ENSFCAG00000022867	NMD3	99	78.175	Felis_catus
ENSIPUG00000005073	nmd3	94	80.211	ENSFALG00000008711	NMD3	100	80.211	Ficedula_albicollis
ENSIPUG00000005073	nmd3	99	78.416	ENSFDAG00000013724	-	100	78.416	Fukomys_damarensis
ENSIPUG00000005073	nmd3	97	65.720	ENSFDAG00000012197	-	98	66.119	Fukomys_damarensis
ENSIPUG00000005073	nmd3	100	85.119	ENSFHEG00000000415	nmd3	100	85.119	Fundulus_heteroclitus
ENSIPUG00000005073	nmd3	97	82.209	ENSGMOG00000009675	nmd3	100	82.209	Gadus_morhua
ENSIPUG00000005073	nmd3	100	80.594	ENSGALG00000009533	NMD3	100	80.594	Gallus_gallus
ENSIPUG00000005073	nmd3	99	85.915	ENSGAFG00000012798	nmd3	94	85.915	Gambusia_affinis
ENSIPUG00000005073	nmd3	100	84.127	ENSGACG00000010028	nmd3	100	84.127	Gasterosteus_aculeatus
ENSIPUG00000005073	nmd3	99	82.540	ENSGAGG00000006556	NMD3	99	82.540	Gopherus_agassizii
ENSIPUG00000005073	nmd3	99	78.968	ENSGGOG00000007157	NMD3	100	78.968	Gorilla_gorilla
ENSIPUG00000005073	nmd3	99	64.016	ENSGGOG00000028590	-	99	64.016	Gorilla_gorilla
ENSIPUG00000005073	nmd3	100	88.095	ENSHBUG00000001781	nmd3	100	88.095	Haplochromis_burtoni
ENSIPUG00000005073	nmd3	99	63.690	ENSHGLG00000010477	-	100	63.690	Heterocephalus_glaber_female
ENSIPUG00000005073	nmd3	99	78.571	ENSHGLG00000014451	-	100	78.571	Heterocephalus_glaber_female
ENSIPUG00000005073	nmd3	99	63.690	ENSHGLG00100001042	-	100	63.690	Heterocephalus_glaber_male
ENSIPUG00000005073	nmd3	99	78.571	ENSHGLG00100006613	-	100	78.571	Heterocephalus_glaber_male
ENSIPUG00000005073	nmd3	99	86.056	ENSHCOG00000004292	nmd3	92	86.056	Hippocampus_comes
ENSIPUG00000005073	nmd3	99	79.365	ENSSTOG00000001899	NMD3	100	79.365	Ictidomys_tridecemlineatus
ENSIPUG00000005073	nmd3	97	78.937	ENSJJAG00000019759	Nmd3	99	78.937	Jaculus_jaculus
ENSIPUG00000005073	nmd3	100	85.317	ENSKMAG00000020427	nmd3	100	85.317	Kryptolebias_marmoratus
ENSIPUG00000005073	nmd3	100	84.980	ENSLBEG00000022216	nmd3	100	84.980	Labrus_bergylta
ENSIPUG00000005073	nmd3	99	74.749	ENSLACG00000005731	NMD3	99	78.261	Latimeria_chalumnae
ENSIPUG00000005073	nmd3	100	83.960	ENSLOCG00000003561	nmd3	100	83.960	Lepisosteus_oculatus
ENSIPUG00000005073	nmd3	99	76.040	ENSLAFG00000007231	NMD3	100	76.040	Loxodonta_africana
ENSIPUG00000005073	nmd3	99	78.175	ENSMFAG00000040934	NMD3	100	78.175	Macaca_fascicularis
ENSIPUG00000005073	nmd3	99	77.336	ENSMMUG00000009564	NMD3	99	76.923	Macaca_mulatta
ENSIPUG00000005073	nmd3	99	78.175	ENSMNEG00000034626	NMD3	100	78.175	Macaca_nemestrina
ENSIPUG00000005073	nmd3	88	79.054	ENSMLEG00000002741	NMD3	100	79.054	Mandrillus_leucophaeus
ENSIPUG00000005073	nmd3	100	85.913	ENSMAMG00000012427	nmd3	100	85.913	Mastacembelus_armatus
ENSIPUG00000005073	nmd3	100	88.095	ENSMZEG00005016888	nmd3	100	88.095	Maylandia_zebra
ENSIPUG00000005073	nmd3	100	79.604	ENSMGAG00000010498	NMD3	100	79.604	Meleagris_gallopavo
ENSIPUG00000005073	nmd3	99	78.175	ENSMAUG00000000633	Nmd3	100	78.175	Mesocricetus_auratus
ENSIPUG00000005073	nmd3	99	78.373	ENSMICG00000049196	NMD3	100	78.373	Microcebus_murinus
ENSIPUG00000005073	nmd3	99	77.535	ENSMOCG00000005180	Nmd3	100	77.535	Microtus_ochrogaster
ENSIPUG00000005073	nmd3	100	86.139	ENSMMOG00000012765	nmd3	100	86.139	Mola_mola
ENSIPUG00000005073	nmd3	99	64.286	ENSMODG00000016296	NMD3	100	64.038	Monodelphis_domestica
ENSIPUG00000005073	nmd3	100	87.103	ENSMALG00000009256	nmd3	100	87.103	Monopterus_albus
ENSIPUG00000005073	nmd3	99	77.579	MGP_CAROLIEiJ_G0025069	Nmd3	100	77.579	Mus_caroli
ENSIPUG00000005073	nmd3	99	77.579	ENSMUSG00000027787	Nmd3	100	77.579	Mus_musculus
ENSIPUG00000005073	nmd3	99	77.579	MGP_PahariEiJ_G0026512	Nmd3	100	77.579	Mus_pahari
ENSIPUG00000005073	nmd3	99	77.778	MGP_SPRETEiJ_G0026011	Nmd3	100	77.778	Mus_spretus
ENSIPUG00000005073	nmd3	99	78.175	ENSMPUG00000002955	NMD3	99	78.175	Mustela_putorius_furo
ENSIPUG00000005073	nmd3	97	74.797	ENSMLUG00000000701	NMD3	97	74.797	Myotis_lucifugus
ENSIPUG00000005073	nmd3	99	78.330	ENSNGAG00000012307	Nmd3	99	78.330	Nannospalax_galili
ENSIPUG00000005073	nmd3	100	87.698	ENSNBRG00000003324	nmd3	100	87.698	Neolamprologus_brichardi
ENSIPUG00000005073	nmd3	99	78.968	ENSNLEG00000004655	NMD3	100	78.968	Nomascus_leucogenys
ENSIPUG00000005073	nmd3	73	70.175	ENSOPRG00000007690	-	73	70.175	Ochotona_princeps
ENSIPUG00000005073	nmd3	99	78.571	ENSODEG00000006270	NMD3	100	78.571	Octodon_degus
ENSIPUG00000005073	nmd3	100	88.294	ENSONIG00000003643	nmd3	100	88.294	Oreochromis_niloticus
ENSIPUG00000005073	nmd3	99	78.044	ENSOCUG00000017454	NMD3	100	78.044	Oryctolagus_cuniculus
ENSIPUG00000005073	nmd3	100	86.310	ENSORLG00000006279	nmd3	100	86.310	Oryzias_latipes
ENSIPUG00000005073	nmd3	100	86.111	ENSORLG00020003843	nmd3	100	86.111	Oryzias_latipes_hni
ENSIPUG00000005073	nmd3	100	86.111	ENSORLG00015006379	nmd3	100	86.111	Oryzias_latipes_hsok
ENSIPUG00000005073	nmd3	100	86.706	ENSOMEG00000012144	nmd3	100	86.706	Oryzias_melastigma
ENSIPUG00000005073	nmd3	99	77.778	ENSOGAG00000014910	NMD3	100	77.778	Otolemur_garnettii
ENSIPUG00000005073	nmd3	99	78.400	ENSOARG00000001883	NMD3	97	78.400	Ovis_aries
ENSIPUG00000005073	nmd3	99	78.571	ENSPPAG00000043829	NMD3	100	78.571	Pan_paniscus
ENSIPUG00000005073	nmd3	99	78.557	ENSPPRG00000000724	NMD3	97	78.557	Panthera_pardus
ENSIPUG00000005073	nmd3	99	77.976	ENSPTIG00000016761	NMD3	99	77.976	Panthera_tigris_altaica
ENSIPUG00000005073	nmd3	99	78.571	ENSPTRG00000015586	NMD3	100	78.571	Pan_troglodytes
ENSIPUG00000005073	nmd3	99	77.535	ENSPANG00000006665	NMD3	95	77.535	Papio_anubis
ENSIPUG00000005073	nmd3	100	85.119	ENSPKIG00000009928	nmd3	100	85.119	Paramormyrops_kingsleyae
ENSIPUG00000005073	nmd3	100	81.782	ENSPSIG00000007591	NMD3	100	81.782	Pelodiscus_sinensis
ENSIPUG00000005073	nmd3	100	81.548	ENSPMGG00000014015	nmd3	100	81.548	Periophthalmus_magnuspinnatus
ENSIPUG00000005073	nmd3	99	78.571	ENSPEMG00000021880	Nmd3	100	78.571	Peromyscus_maniculatus_bairdii
ENSIPUG00000005073	nmd3	99	81.349	ENSPCIG00000020869	NMD3	100	81.349	Phascolarctos_cinereus
ENSIPUG00000005073	nmd3	100	86.508	ENSPFOG00000012103	nmd3	100	86.508	Poecilia_formosa
ENSIPUG00000005073	nmd3	100	86.706	ENSPLAG00000008087	nmd3	100	86.706	Poecilia_latipinna
ENSIPUG00000005073	nmd3	100	86.508	ENSPMEG00000008506	nmd3	100	86.508	Poecilia_mexicana
ENSIPUG00000005073	nmd3	100	86.905	ENSPREG00000001848	nmd3	100	86.905	Poecilia_reticulata
ENSIPUG00000005073	nmd3	99	78.770	ENSPPYG00000014263	NMD3	100	78.770	Pongo_abelii
ENSIPUG00000005073	nmd3	91	64.783	ENSPCAG00000009851	NMD3	100	64.783	Procavia_capensis
ENSIPUG00000005073	nmd3	85	75.630	ENSPVAG00000003301	NMD3	85	75.630	Pteropus_vampyrus
ENSIPUG00000005073	nmd3	100	88.095	ENSPNYG00000006778	nmd3	100	88.095	Pundamilia_nyererei
ENSIPUG00000005073	nmd3	100	90.278	ENSPNAG00000009442	nmd3	100	90.278	Pygocentrus_nattereri
ENSIPUG00000005073	nmd3	99	77.579	ENSRNOG00000009310	Nmd3	100	77.579	Rattus_norvegicus
ENSIPUG00000005073	nmd3	99	74.802	ENSRBIG00000040379	NMD3	100	74.802	Rhinopithecus_bieti
ENSIPUG00000005073	nmd3	99	78.571	ENSRROG00000036181	NMD3	100	78.571	Rhinopithecus_roxellana
ENSIPUG00000005073	nmd3	89	45.376	YHR170W	NMD3	94	44.064	Saccharomyces_cerevisiae
ENSIPUG00000005073	nmd3	99	78.000	ENSSBOG00000024021	NMD3	99	78.000	Saimiri_boliviensis_boliviensis
ENSIPUG00000005073	nmd3	99	75.397	ENSSHAG00000016044	NMD3	100	75.397	Sarcophilus_harrisii
ENSIPUG00000005073	nmd3	100	87.103	ENSSFOG00015003609	nmd3	100	87.103	Scleropages_formosus
ENSIPUG00000005073	nmd3	100	85.317	ENSSMAG00000012887	nmd3	100	85.317	Scophthalmus_maximus
ENSIPUG00000005073	nmd3	100	87.500	ENSSDUG00000023721	nmd3	100	87.500	Seriola_dumerili
ENSIPUG00000005073	nmd3	100	87.302	ENSSLDG00000006565	nmd3	100	87.302	Seriola_lalandi_dorsalis
ENSIPUG00000005073	nmd3	97	78.323	ENSSARG00000010402	NMD3	99	78.323	Sorex_araneus
ENSIPUG00000005073	nmd3	99	80.200	ENSSPUG00000018791	NMD3	100	80.200	Sphenodon_punctatus
ENSIPUG00000005073	nmd3	100	86.508	ENSSPAG00000014328	nmd3	100	86.508	Stegastes_partitus
ENSIPUG00000005073	nmd3	99	78.112	ENSSSCG00000022952	NMD3	100	77.976	Sus_scrofa
ENSIPUG00000005073	nmd3	91	78.091	ENSTGUG00000015141	-	100	78.091	Taeniopygia_guttata
ENSIPUG00000005073	nmd3	99	79.563	ENSTGUG00000011140	-	100	79.563	Taeniopygia_guttata
ENSIPUG00000005073	nmd3	100	85.516	ENSTRUG00000005958	nmd3	100	85.516	Takifugu_rubripes
ENSIPUG00000005073	nmd3	99	56.944	ENSTBEG00000011783	-	100	56.944	Tupaia_belangeri
ENSIPUG00000005073	nmd3	99	73.611	ENSTTRG00000012938	NMD3	100	73.611	Tursiops_truncatus
ENSIPUG00000005073	nmd3	84	75.177	ENSUAMG00000009305	-	99	78.109	Ursus_americanus
ENSIPUG00000005073	nmd3	99	78.557	ENSUMAG00000011070	NMD3	99	78.514	Ursus_maritimus
ENSIPUG00000005073	nmd3	99	77.381	ENSVPAG00000008779	NMD3	100	77.381	Vicugna_pacos
ENSIPUG00000005073	nmd3	99	78.715	ENSVVUG00000023055	NMD3	99	78.715	Vulpes_vulpes
ENSIPUG00000005073	nmd3	100	82.376	ENSXETG00000027727	nmd3	100	82.376	Xenopus_tropicalis
ENSIPUG00000005073	nmd3	75	72.619	ENSXCOG00000012490	nmd3	83	85.047	Xiphophorus_couchianus
ENSIPUG00000005073	nmd3	100	86.706	ENSXMAG00000018406	nmd3	100	86.706	Xiphophorus_maculatus