EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000005249 (Gene tree)
Gene ID: 108260888
Gene Symbol: si:dkey-85a20.4
Alias: -
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 57276 bases
Position: chr29:4433900-4491175
Accession: 108260888
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000007708	SpoU_methylase	PF00588.19	6.8e-28	1	1
ENSIPUP00000007609	SpoU_methylase	PF00588.19	7.2e-28	1	1
ENSIPUP00000007648	SpoU_methylase	PF00588.19	7.3e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000008044	-	4857	XM_017461574	ENSIPUP00000007708	1618 (aa)	XP_017317063	-
ENSIPUT00000007941	-	5022	-	ENSIPUP00000007609	1673 (aa)	-	-
ENSIPUT00000007981	-	5046	-	ENSIPUP00000007648	1681 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000005249's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000005249's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000005249	si:dkey-85a20.4	84	43.500	ENSG00000059588	TARBP1	99	40.423	Homo_sapiens
ENSIPUG00000005249	si:dkey-85a20.4	98	53.424	ENSAPOG00000016419	si:dkey-85a20.4	96	57.390	Acanthochromis_polyacanthus
ENSIPUG00000005249	si:dkey-85a20.4	81	43.434	ENSAMEG00000003359	TARBP1	98	43.358	Ailuropoda_melanoleuca
ENSIPUG00000005249	si:dkey-85a20.4	99	53.491	ENSATEG00000020266	si:dkey-85a20.4	97	57.541	Anabas_testudineus
ENSIPUG00000005249	si:dkey-85a20.4	81	44.696	ENSAPLG00000007666	TARBP1	98	45.434	Anas_platyrhynchos
ENSIPUG00000005249	si:dkey-85a20.4	81	43.068	ENSACAG00000001142	TARBP1	99	39.290	Anolis_carolinensis
ENSIPUG00000005249	si:dkey-85a20.4	83	42.390	ENSANAG00000022031	TARBP1	88	42.426	Aotus_nancymaae
ENSIPUG00000005249	si:dkey-85a20.4	81	50.289	ENSBTAG00000004517	TARBP1	99	50.289	Bos_taurus
ENSIPUG00000005249	si:dkey-85a20.4	98	40.387	ENSCJAG00000018155	TARBP1	99	40.691	Callithrix_jacchus
ENSIPUG00000005249	si:dkey-85a20.4	84	43.008	ENSCAFG00000011533	TARBP1	99	42.867	Canis_familiaris
ENSIPUG00000005249	si:dkey-85a20.4	84	43.188	ENSCAFG00020027141	TARBP1	99	40.206	Canis_lupus_dingo
ENSIPUG00000005249	si:dkey-85a20.4	85	42.420	ENSCHIG00000011437	TARBP1	99	39.771	Capra_hircus
ENSIPUG00000005249	si:dkey-85a20.4	78	43.615	ENSTSYG00000010382	TARBP1	95	43.077	Carlito_syrichta
ENSIPUG00000005249	si:dkey-85a20.4	77	41.890	ENSCAPG00000010831	TARBP1	98	41.890	Cavia_aperea
ENSIPUG00000005249	si:dkey-85a20.4	81	43.608	ENSCPOG00000013995	TARBP1	84	43.599	Cavia_porcellus
ENSIPUG00000005249	si:dkey-85a20.4	84	43.500	ENSCCAG00000037278	TARBP1	99	39.988	Cebus_capucinus
ENSIPUG00000005249	si:dkey-85a20.4	84	43.592	ENSCATG00000011754	TARBP1	99	40.375	Cercocebus_atys
ENSIPUG00000005249	si:dkey-85a20.4	78	43.369	ENSCLAG00000003655	TARBP1	95	43.359	Chinchilla_lanigera
ENSIPUG00000005249	si:dkey-85a20.4	77	44.841	ENSCSAG00000010100	TARBP1	98	44.841	Chlorocebus_sabaeus
ENSIPUG00000005249	si:dkey-85a20.4	77	43.134	ENSCPBG00000005587	TARBP1	92	40.357	Chrysemys_picta_bellii
ENSIPUG00000005249	si:dkey-85a20.4	81	44.379	ENSCANG00000034343	TARBP1	98	44.379	Colobus_angolensis_palliatus
ENSIPUG00000005249	si:dkey-85a20.4	83	42.426	ENSCGRG00001016690	Tarbp1	87	42.426	Cricetulus_griseus_chok1gshd
ENSIPUG00000005249	si:dkey-85a20.4	83	42.426	ENSCGRG00000016893	Tarbp1	93	42.426	Cricetulus_griseus_crigri
ENSIPUG00000005249	si:dkey-85a20.4	98	50.155	ENSCSEG00000005255	si:dkey-85a20.4	99	57.640	Cynoglossus_semilaevis
ENSIPUG00000005249	si:dkey-85a20.4	98	59.913	ENSDARG00000079055	si:dkey-85a20.4	97	72.887	Danio_rerio
ENSIPUG00000005249	si:dkey-85a20.4	83	42.686	ENSDNOG00000008637	TARBP1	99	39.845	Dasypus_novemcinctus
ENSIPUG00000005249	si:dkey-85a20.4	78	44.037	ENSDORG00000007984	Tarbp1	99	43.960	Dipodomys_ordii
ENSIPUG00000005249	si:dkey-85a20.4	84	43.741	ENSEASG00005000252	TARBP1	99	40.765	Equus_asinus_asinus
ENSIPUG00000005249	si:dkey-85a20.4	84	43.737	ENSECAG00000023673	TARBP1	98	46.282	Equus_caballus
ENSIPUG00000005249	si:dkey-85a20.4	93	58.984	ENSELUG00000012193	si:dkey-85a20.4	97	58.984	Esox_lucius
ENSIPUG00000005249	si:dkey-85a20.4	83	42.049	ENSFCAG00000014183	TARBP1	99	38.916	Felis_catus
ENSIPUG00000005249	si:dkey-85a20.4	78	45.538	ENSFALG00000013565	TARBP1	98	45.073	Ficedula_albicollis
ENSIPUG00000005249	si:dkey-85a20.4	77	42.901	ENSFDAG00000001308	TARBP1	98	42.901	Fukomys_damarensis
ENSIPUG00000005249	si:dkey-85a20.4	92	62.198	ENSFHEG00000007565	si:dkey-85a20.4	97	62.198	Fundulus_heteroclitus
ENSIPUG00000005249	si:dkey-85a20.4	83	54.618	ENSGMOG00000004549	si:dkey-85a20.4	98	54.978	Gadus_morhua
ENSIPUG00000005249	si:dkey-85a20.4	82	42.784	ENSGALG00000011000	TARBP1	96	42.936	Gallus_gallus
ENSIPUG00000005249	si:dkey-85a20.4	98	51.391	ENSGAFG00000007387	si:dkey-85a20.4	97	55.766	Gambusia_affinis
ENSIPUG00000005249	si:dkey-85a20.4	83	56.152	ENSGACG00000005865	si:dkey-85a20.4	98	56.080	Gasterosteus_aculeatus
ENSIPUG00000005249	si:dkey-85a20.4	81	45.182	ENSGAGG00000012102	TARBP1	93	42.515	Gopherus_agassizii
ENSIPUG00000005249	si:dkey-85a20.4	82	43.149	ENSGGOG00000022879	TARBP1	98	43.389	Gorilla_gorilla
ENSIPUG00000005249	si:dkey-85a20.4	98	53.486	ENSHBUG00000008877	si:dkey-85a20.4	96	58.327	Haplochromis_burtoni
ENSIPUG00000005249	si:dkey-85a20.4	81	44.111	ENSHGLG00000011592	TARBP1	84	43.590	Heterocephalus_glaber_female
ENSIPUG00000005249	si:dkey-85a20.4	81	44.314	ENSHGLG00100015169	TARBP1	92	43.800	Heterocephalus_glaber_male
ENSIPUG00000005249	si:dkey-85a20.4	81	44.174	ENSSTOG00000032291	TARBP1	95	44.494	Ictidomys_tridecemlineatus
ENSIPUG00000005249	si:dkey-85a20.4	81	41.569	ENSJJAG00000017840	Tarbp1	92	41.422	Jaculus_jaculus
ENSIPUG00000005249	si:dkey-85a20.4	79	59.724	ENSKMAG00000017546	si:dkey-85a20.4	90	59.724	Kryptolebias_marmoratus
ENSIPUG00000005249	si:dkey-85a20.4	74	63.919	ENSLBEG00000012132	si:dkey-85a20.4	90	63.919	Labrus_bergylta
ENSIPUG00000005249	si:dkey-85a20.4	98	42.623	ENSLACG00000004337	TARBP1	96	46.196	Latimeria_chalumnae
ENSIPUG00000005249	si:dkey-85a20.4	98	51.023	ENSLOCG00000016214	si:dkey-85a20.4	97	54.885	Lepisosteus_oculatus
ENSIPUG00000005249	si:dkey-85a20.4	83	43.324	ENSLAFG00000011394	TARBP1	88	43.232	Loxodonta_africana
ENSIPUG00000005249	si:dkey-85a20.4	84	42.405	ENSMFAG00000041068	TARBP1	99	39.549	Macaca_fascicularis
ENSIPUG00000005249	si:dkey-85a20.4	84	42.335	ENSMMUG00000021703	TARBP1	99	39.191	Macaca_mulatta
ENSIPUG00000005249	si:dkey-85a20.4	84	43.570	ENSMNEG00000045002	TARBP1	99	40.315	Macaca_nemestrina
ENSIPUG00000005249	si:dkey-85a20.4	81	44.297	ENSMLEG00000044182	TARBP1	98	44.297	Mandrillus_leucophaeus
ENSIPUG00000005249	si:dkey-85a20.4	98	53.337	ENSMAMG00000021760	si:dkey-85a20.4	96	58.373	Mastacembelus_armatus
ENSIPUG00000005249	si:dkey-85a20.4	98	53.300	ENSMZEG00005005751	si:dkey-85a20.4	96	58.090	Maylandia_zebra
ENSIPUG00000005249	si:dkey-85a20.4	83	42.374	ENSMAUG00000020968	Tarbp1	87	42.374	Mesocricetus_auratus
ENSIPUG00000005249	si:dkey-85a20.4	76	64.481	ENSMICG00000015280	TARBP1	96	64.481	Microcebus_murinus
ENSIPUG00000005249	si:dkey-85a20.4	83	42.151	ENSMOCG00000004128	Tarbp1	87	41.981	Microtus_ochrogaster
ENSIPUG00000005249	si:dkey-85a20.4	98	51.859	ENSMMOG00000007795	si:dkey-85a20.4	97	56.240	Mola_mola
ENSIPUG00000005249	si:dkey-85a20.4	82	42.920	ENSMODG00000008504	TARBP1	99	39.401	Monodelphis_domestica
ENSIPUG00000005249	si:dkey-85a20.4	98	53.300	ENSMALG00000002916	si:dkey-85a20.4	96	57.335	Monopterus_albus
ENSIPUG00000005249	si:dkey-85a20.4	83	42.919	MGP_CAROLIEiJ_G0031729	Tarbp1	74	59.917	Mus_caroli
ENSIPUG00000005249	si:dkey-85a20.4	83	42.368	ENSMUSG00000090290	Tarbp1	87	42.357	Mus_musculus
ENSIPUG00000005249	si:dkey-85a20.4	83	42.582	MGP_PahariEiJ_G0023326	Tarbp1	87	42.591	Mus_pahari
ENSIPUG00000005249	si:dkey-85a20.4	83	42.511	MGP_SPRETEiJ_G0032846	Tarbp1	87	42.500	Mus_spretus
ENSIPUG00000005249	si:dkey-85a20.4	74	44.418	ENSMPUG00000002802	TARBP1	98	44.640	Mustela_putorius_furo
ENSIPUG00000005249	si:dkey-85a20.4	82	42.638	ENSMLUG00000002414	TARBP1	98	42.743	Myotis_lucifugus
ENSIPUG00000005249	si:dkey-85a20.4	84	43.570	ENSNLEG00000002518	TARBP1	99	40.315	Nomascus_leucogenys
ENSIPUG00000005249	si:dkey-85a20.4	68	52.365	ENSOPRG00000013822	TARBP1	69	52.365	Ochotona_princeps
ENSIPUG00000005249	si:dkey-85a20.4	84	42.767	ENSODEG00000005238	TARBP1	97	40.936	Octodon_degus
ENSIPUG00000005249	si:dkey-85a20.4	83	57.328	ENSONIG00000009789	si:dkey-85a20.4	98	57.328	Oreochromis_niloticus
ENSIPUG00000005249	si:dkey-85a20.4	84	42.375	ENSOCUG00000017418	TARBP1	98	39.480	Oryctolagus_cuniculus
ENSIPUG00000005249	si:dkey-85a20.4	98	51.765	ENSORLG00000010529	si:dkey-85a20.4	95	55.943	Oryzias_latipes
ENSIPUG00000005249	si:dkey-85a20.4	98	51.393	ENSORLG00020019264	si:dkey-85a20.4	95	55.626	Oryzias_latipes_hni
ENSIPUG00000005249	si:dkey-85a20.4	98	51.269	ENSORLG00015003276	si:dkey-85a20.4	95	55.388	Oryzias_latipes_hsok
ENSIPUG00000005249	si:dkey-85a20.4	84	41.702	ENSOGAG00000002379	TARBP1	99	38.940	Otolemur_garnettii
ENSIPUG00000005249	si:dkey-85a20.4	85	42.431	ENSOARG00000003434	TARBP1	94	42.471	Ovis_aries
ENSIPUG00000005249	si:dkey-85a20.4	81	44.355	ENSPPAG00000028097	TARBP1	98	44.600	Pan_paniscus
ENSIPUG00000005249	si:dkey-85a20.4	81	43.142	ENSPPRG00000013561	TARBP1	86	42.847	Panthera_pardus
ENSIPUG00000005249	si:dkey-85a20.4	80	43.662	ENSPTIG00000009281	TARBP1	98	43.440	Panthera_tigris_altaica
ENSIPUG00000005249	si:dkey-85a20.4	84	43.710	ENSPTRG00000002124	TARBP1	99	40.750	Pan_troglodytes
ENSIPUG00000005249	si:dkey-85a20.4	84	43.662	ENSPANG00000021933	TARBP1	99	40.388	Papio_anubis
ENSIPUG00000005249	si:dkey-85a20.4	98	54.518	ENSPKIG00000016716	si:dkey-85a20.4	96	58.281	Paramormyrops_kingsleyae
ENSIPUG00000005249	si:dkey-85a20.4	77	45.476	ENSPSIG00000010699	TARBP1	98	45.242	Pelodiscus_sinensis
ENSIPUG00000005249	si:dkey-85a20.4	83	43.369	ENSPEMG00000006888	Tarbp1	91	43.369	Peromyscus_maniculatus_bairdii
ENSIPUG00000005249	si:dkey-85a20.4	89	70.556	ENSPCIG00000029710	TARBP1	98	70.556	Phascolarctos_cinereus
ENSIPUG00000005249	si:dkey-85a20.4	83	55.105	ENSPFOG00000013020	si:dkey-85a20.4	98	55.033	Poecilia_formosa
ENSIPUG00000005249	si:dkey-85a20.4	98	51.948	ENSPLAG00000006044	si:dkey-85a20.4	97	56.161	Poecilia_latipinna
ENSIPUG00000005249	si:dkey-85a20.4	98	51.852	ENSPMEG00000017857	si:dkey-85a20.4	97	56.003	Poecilia_mexicana
ENSIPUG00000005249	si:dkey-85a20.4	98	51.824	ENSPREG00000022753	si:dkey-85a20.4	97	56.240	Poecilia_reticulata
ENSIPUG00000005249	si:dkey-85a20.4	75	44.126	ENSPPYG00000000102	TARBP1	98	44.395	Pongo_abelii
ENSIPUG00000005249	si:dkey-85a20.4	61	78.195	ENSPCAG00000004808	TARBP1	66	78.195	Procavia_capensis
ENSIPUG00000005249	si:dkey-85a20.4	84	41.568	ENSPCOG00000005666	TARBP1	99	38.485	Propithecus_coquereli
ENSIPUG00000005249	si:dkey-85a20.4	80	60.150	ENSPVAG00000014798	TARBP1	96	58.333	Pteropus_vampyrus
ENSIPUG00000005249	si:dkey-85a20.4	98	51.985	ENSPNYG00000019135	si:dkey-85a20.4	97	56.439	Pundamilia_nyererei
ENSIPUG00000005249	si:dkey-85a20.4	83	41.286	ENSRNOG00000053574	Tarbp1	87	41.387	Rattus_norvegicus
ENSIPUG00000005249	si:dkey-85a20.4	84	41.226	ENSRBIG00000043362	TARBP1	94	41.297	Rhinopithecus_bieti
ENSIPUG00000005249	si:dkey-85a20.4	84	43.592	ENSRROG00000029527	TARBP1	90	43.148	Rhinopithecus_roxellana
ENSIPUG00000005249	si:dkey-85a20.4	81	44.068	ENSSBOG00000034503	TARBP1	95	44.118	Saimiri_boliviensis_boliviensis
ENSIPUG00000005249	si:dkey-85a20.4	81	43.709	ENSSHAG00000000013	TARBP1	98	43.709	Sarcophilus_harrisii
ENSIPUG00000005249	si:dkey-85a20.4	93	54.325	ENSSFOG00015002660	si:dkey-85a20.4	97	57.371	Scleropages_formosus
ENSIPUG00000005249	si:dkey-85a20.4	98	53.081	ENSSMAG00000007081	si:dkey-85a20.4	96	58.987	Scophthalmus_maximus
ENSIPUG00000005249	si:dkey-85a20.4	98	54.019	ENSSDUG00000023566	si:dkey-85a20.4	96	58.360	Seriola_dumerili
ENSIPUG00000005249	si:dkey-85a20.4	98	55.453	ENSSLDG00000020200	si:dkey-85a20.4	96	59.843	Seriola_lalandi_dorsalis
ENSIPUG00000005249	si:dkey-85a20.4	73	56.174	ENSSARG00000012207	TARBP1	74	56.174	Sorex_araneus
ENSIPUG00000005249	si:dkey-85a20.4	83	42.867	ENSSPUG00000015364	TARBP1	96	43.574	Sphenodon_punctatus
ENSIPUG00000005249	si:dkey-85a20.4	98	53.506	ENSSPAG00000007213	si:dkey-85a20.4	96	57.547	Stegastes_partitus
ENSIPUG00000005249	si:dkey-85a20.4	98	40.707	ENSSSCG00000010160	TARBP1	99	44.444	Sus_scrofa
ENSIPUG00000005249	si:dkey-85a20.4	78	44.801	ENSTGUG00000010214	TARBP1	99	44.725	Taeniopygia_guttata
ENSIPUG00000005249	si:dkey-85a20.4	91	50.688	ENSTNIG00000016586	si:dkey-85a20.4	98	56.264	Tetraodon_nigroviridis
ENSIPUG00000005249	si:dkey-85a20.4	78	40.000	ENSTTRG00000008707	TARBP1	83	40.106	Tursiops_truncatus
ENSIPUG00000005249	si:dkey-85a20.4	79	43.030	ENSUMAG00000006730	TARBP1	96	43.656	Ursus_maritimus
ENSIPUG00000005249	si:dkey-85a20.4	53	70.886	ENSVPAG00000007665	TARBP1	62	70.886	Vicugna_pacos
ENSIPUG00000005249	si:dkey-85a20.4	81	44.224	ENSVVUG00000007460	TARBP1	98	42.014	Vulpes_vulpes
ENSIPUG00000005249	si:dkey-85a20.4	82	39.227	ENSXETG00000016224	tarbp1	99	39.468	Xenopus_tropicalis
ENSIPUG00000005249	si:dkey-85a20.4	85	58.460	ENSXCOG00000011779	si:dkey-85a20.4	99	60.828	Xiphophorus_couchianus
ENSIPUG00000005249	si:dkey-85a20.4	64	54.115	ENSXMAG00000009600	si:dkey-85a20.4	100	54.021	Xiphophorus_maculatus