EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000005379 (Gene tree)
Gene ID: 108281033
Gene Symbol: e4f1
Alias: zgc:114190
Full Name: E4F transcription factor 1
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 16694 bases
Position: chr2:12422423-12439116
Accession: 108281033
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000007860	zf-C2H2	PF00096.26	1e-34	1	7
ENSIPUP00000007860	zf-C2H2	PF00096.26	1e-34	2	7
ENSIPUP00000007860	zf-C2H2	PF00096.26	1e-34	3	7
ENSIPUP00000007860	zf-C2H2	PF00096.26	1e-34	4	7
ENSIPUP00000007860	zf-C2H2	PF00096.26	1e-34	5	7
ENSIPUP00000007860	zf-C2H2	PF00096.26	1e-34	6	7
ENSIPUP00000007860	zf-C2H2	PF00096.26	1e-34	7	7
ENSIPUP00000007860	zf-met	PF12874.7	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000008200	-	2079	XM_017496582	ENSIPUP00000007860	692 (aa)	XP_017352071	-

Gene Model

Click here to download ENSIPUG00000005379's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000005379's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000005379	e4f1	72	38.509	ENSIPUG00000015233	-	57	38.554
ENSIPUG00000005379	e4f1	53	32.174	ENSIPUG00000015037	znf711	52	32.174
ENSIPUG00000005379	e4f1	71	38.509	ENSIPUG00000013065	-	93	38.509
ENSIPUG00000005379	e4f1	70	42.373	ENSIPUG00000021434	-	93	42.373
ENSIPUG00000005379	e4f1	52	39.474	ENSIPUG00000008581	znf319b	92	39.474
ENSIPUG00000005379	e4f1	72	35.204	ENSIPUG00000011258	-	90	36.872
ENSIPUG00000005379	e4f1	72	41.667	ENSIPUG00000023688	-	96	41.096
ENSIPUG00000005379	e4f1	55	44.928	ENSIPUG00000023761	-	71	44.928
ENSIPUG00000005379	e4f1	57	39.521	ENSIPUG00000017575	-	56	39.521
ENSIPUG00000005379	e4f1	74	39.535	ENSIPUG00000015400	-	96	39.189
ENSIPUG00000005379	e4f1	54	41.333	ENSIPUG00000007076	-	98	33.152
ENSIPUG00000005379	e4f1	72	41.358	ENSIPUG00000015468	-	79	41.290
ENSIPUG00000005379	e4f1	50	39.521	ENSIPUG00000015177	-	60	39.521
ENSIPUG00000005379	e4f1	72	41.667	ENSIPUG00000001248	prdm5	77	39.506
ENSIPUG00000005379	e4f1	54	42.623	ENSIPUG00000002075	znf341	54	42.623
ENSIPUG00000005379	e4f1	72	42.169	ENSIPUG00000021441	-	94	39.752
ENSIPUG00000005379	e4f1	71	37.736	ENSIPUG00000021527	-	92	39.759
ENSIPUG00000005379	e4f1	73	40.909	ENSIPUG00000016075	-	94	40.909
ENSIPUG00000005379	e4f1	79	35.106	ENSIPUG00000018102	znf646	56	40.909
ENSIPUG00000005379	e4f1	71	38.650	ENSIPUG00000021518	-	83	41.026
ENSIPUG00000005379	e4f1	71	32.589	ENSIPUG00000021515	-	90	38.323
ENSIPUG00000005379	e4f1	54	40.000	ENSIPUG00000011652	znf648	89	38.272
ENSIPUG00000005379	e4f1	72	40.404	ENSIPUG00000023635	-	97	40.491
ENSIPUG00000005379	e4f1	63	38.816	ENSIPUG00000021472	-	92	38.816
ENSIPUG00000005379	e4f1	71	37.333	ENSIPUG00000006916	-	77	41.615
ENSIPUG00000005379	e4f1	62	43.103	ENSIPUG00000004905	znf236	78	43.103
ENSIPUG00000005379	e4f1	51	38.158	ENSIPUG00000003040	zbtb47a	68	38.158
ENSIPUG00000005379	e4f1	53	40.120	ENSIPUG00000001941	-	89	51.220
ENSIPUG00000005379	e4f1	71	42.000	ENSIPUG00000022751	-	99	40.476
ENSIPUG00000005379	e4f1	59	40.506	ENSIPUG00000005733	-	69	40.506
ENSIPUG00000005379	e4f1	71	42.857	ENSIPUG00000016009	znf596	73	42.857
ENSIPUG00000005379	e4f1	71	44.643	ENSIPUG00000002655	-	98	44.643
ENSIPUG00000005379	e4f1	52	41.317	ENSIPUG00000003011	-	53	41.317
ENSIPUG00000005379	e4f1	72	40.719	ENSIPUG00000009750	-	81	40.719
ENSIPUG00000005379	e4f1	50	41.071	ENSIPUG00000011073	-	100	41.071
ENSIPUG00000005379	e4f1	71	40.000	ENSIPUG00000021998	-	90	40.000
ENSIPUG00000005379	e4f1	52	40.252	ENSIPUG00000021556	-	95	40.252
ENSIPUG00000005379	e4f1	56	38.889	ENSIPUG00000022266	ZNF135	64	38.889
ENSIPUG00000005379	e4f1	70	40.523	ENSIPUG00000006936	-	89	38.857
ENSIPUG00000005379	e4f1	72	35.135	ENSIPUG00000019205	-	79	37.654
ENSIPUG00000005379	e4f1	72	40.719	ENSIPUG00000022741	-	79	40.719

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000005379	e4f1	99	46.826	ENSCSEG00000015852	e4f1	96	57.344	Cynoglossus_semilaevis
ENSIPUG00000005379	e4f1	99	54.068	ENSCVAG00000002788	e4f1	100	52.756	Cyprinodon_variegatus
ENSIPUG00000005379	e4f1	72	39.894	ENSEBUG00000016435	e4f1	50	48.746	Eptatretus_burgeri
ENSIPUG00000005379	e4f1	99	53.053	ENSFHEG00000022551	e4f1	97	52.911	Fundulus_heteroclitus
ENSIPUG00000005379	e4f1	99	54.396	ENSGMOG00000011409	e4f1	100	54.396	Gadus_morhua
ENSIPUG00000005379	e4f1	99	56.716	ENSGACG00000011808	e4f1	100	56.309	Gasterosteus_aculeatus
ENSIPUG00000005379	e4f1	99	50.000	ENSHCOG00000016455	e4f1	100	50.064	Hippocampus_comes
ENSIPUG00000005379	e4f1	99	52.806	ENSLBEG00000026373	e4f1	100	53.316	Labrus_bergylta
ENSIPUG00000005379	e4f1	99	57.044	ENSMMOG00000007612	e4f1	100	56.492	Mola_mola
ENSIPUG00000005379	e4f1	99	54.167	ENSMALG00000007314	e4f1	100	54.297	Monopterus_albus
ENSIPUG00000005379	e4f1	99	51.876	ENSORLG00000009160	e4f1	100	52.979	Oryzias_latipes
ENSIPUG00000005379	e4f1	57	50.570	ENSORLG00020017974	e4f1	100	51.378	Oryzias_latipes_hni
ENSIPUG00000005379	e4f1	99	51.425	ENSORLG00015007385	e4f1	100	53.117	Oryzias_latipes_hsok
ENSIPUG00000005379	e4f1	99	53.558	ENSOMEG00000012220	e4f1	100	53.368	Oryzias_melastigma
ENSIPUG00000005379	e4f1	94	59.339	ENSPKIG00000001942	e4f1	99	53.510	Paramormyrops_kingsleyae
ENSIPUG00000005379	e4f1	96	49.821	ENSPMGG00000020527	e4f1	80	58.456	Periophthalmus_magnuspinnatus
ENSIPUG00000005379	e4f1	99	53.436	ENSSFOG00015021291	e4f1	99	52.875	Scleropages_formosus
ENSIPUG00000005379	e4f1	99	51.531	ENSSMAG00000014720	e4f1	100	53.205	Scophthalmus_maximus
ENSIPUG00000005379	e4f1	97	45.370	ENSSPUG00000011420	E4F1	95	46.042	Sphenodon_punctatus
ENSIPUG00000005379	e4f1	99	50.063	ENSTRUG00000005176	e4f1	100	49.624	Takifugu_rubripes
ENSIPUG00000005379	e4f1	95	50.067	ENSTNIG00000018001	e4f1	100	50.200	Tetraodon_nigroviridis
ENSIPUG00000005379	e4f1	78	69.912	ENSXETG00000016091	e4f1	100	69.912	Xenopus_tropicalis