EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000005446 (Gene tree)
Gene ID: 108280983
Gene Symbol: chd5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 49116 bases
Position: chr21:12245039-12294154
Accession: 108280983
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000008600	ResIII	PF04851.15	1.3e-08	1	1
ENSIPUP00000008418	ResIII	PF04851.15	1.6e-08	1	1
ENSIPUP00000008582	ResIII	PF04851.15	1.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000008784	-	5427	XM_017496488	ENSIPUP00000008418	1809 (aa)	XP_017351977	-
ENSIPUT00000008952	-	5421	-	ENSIPUP00000008582	1806 (aa)	-	-
ENSIPUT00000008973	-	3525	-	ENSIPUP00000008600	1174 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000005446's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000005446's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000005446	chd5	86	85.350	ENSIPUG00000003271	chd3	94	71.588
ENSIPUG00000005446	chd5	95	70.906	ENSIPUG00000005694	chd4	93	70.930

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000005446	chd5	98	76.948	ENSG00000116254	CHD5	90	87.290	Homo_sapiens
ENSIPUG00000005446	chd5	98	77.141	ENSAMEG00000009880	CHD5	95	77.614	Ailuropoda_melanoleuca
ENSIPUG00000005446	chd5	100	85.097	ENSACIG00000012582	chd5	99	84.665	Amphilophus_citrinellus
ENSIPUG00000005446	chd5	99	84.358	ENSAOCG00000020356	chd5	93	83.387	Amphiprion_ocellaris
ENSIPUG00000005446	chd5	91	91.549	ENSAPLG00000015475	CHD5	95	74.162	Anas_platyrhynchos
ENSIPUG00000005446	chd5	98	76.227	ENSACAG00000002441	CHD5	94	76.093	Anolis_carolinensis
ENSIPUG00000005446	chd5	90	77.185	ENSANAG00000001078	CHD5	91	78.261	Aotus_nancymaae
ENSIPUG00000005446	chd5	98	80.144	ENSACLG00000003012	chd5	96	80.979	Astatotilapia_calliptera
ENSIPUG00000005446	chd5	95	87.312	ENSAMXG00000008921	chd5	97	91.170	Astyanax_mexicanus
ENSIPUG00000005446	chd5	97	76.605	ENSBTAG00000040477	CHD5	99	78.125	Bos_taurus
ENSIPUG00000005446	chd5	97	77.887	ENSCJAG00000000101	CHD5	94	78.346	Callithrix_jacchus
ENSIPUG00000005446	chd5	97	77.839	ENSCAFG00000019545	CHD5	99	78.325	Canis_familiaris
ENSIPUG00000005446	chd5	98	79.443	ENSCAFG00020008689	CHD5	91	79.206	Canis_lupus_dingo
ENSIPUG00000005446	chd5	98	76.948	ENSCHIG00000015027	CHD5	91	78.470	Capra_hircus
ENSIPUG00000005446	chd5	98	74.329	ENSTSYG00000033991	CHD5	94	76.538	Carlito_syrichta
ENSIPUG00000005446	chd5	98	79.284	ENSCAPG00000009294	CHD5	95	78.791	Cavia_aperea
ENSIPUG00000005446	chd5	98	79.284	ENSCPOG00000025080	CHD5	95	78.791	Cavia_porcellus
ENSIPUG00000005446	chd5	97	78.019	ENSCCAG00000024756	CHD5	94	77.977	Cebus_capucinus
ENSIPUG00000005446	chd5	98	77.098	ENSCATG00000043011	CHD5	94	78.420	Cercocebus_atys
ENSIPUG00000005446	chd5	98	79.160	ENSCLAG00000010589	CHD5	95	78.780	Chinchilla_lanigera
ENSIPUG00000005446	chd5	98	77.098	ENSCSAG00000000733	CHD5	94	78.400	Chlorocebus_sabaeus
ENSIPUG00000005446	chd5	98	77.280	ENSCPBG00000019363	CHD5	99	78.057	Chrysemys_picta_bellii
ENSIPUG00000005446	chd5	98	78.069	ENSCANG00000032302	CHD5	94	78.455	Colobus_angolensis_palliatus
ENSIPUG00000005446	chd5	84	80.697	ENSCGRG00001011042	Chd5	95	81.028	Cricetulus_griseus_chok1gshd
ENSIPUG00000005446	chd5	98	79.477	ENSCGRG00000011341	Chd5	95	79.139	Cricetulus_griseus_crigri
ENSIPUG00000005446	chd5	95	68.309	ENSDARG00000025789	chd4b	93	68.433	Danio_rerio
ENSIPUG00000005446	chd5	99	86.714	ENSDARG00000105083	chd5	99	87.604	Danio_rerio
ENSIPUG00000005446	chd5	93	79.898	ENSDNOG00000046342	CHD5	94	73.636	Dasypus_novemcinctus
ENSIPUG00000005446	chd5	98	79.111	ENSDORG00000005923	Chd5	95	79.008	Dipodomys_ordii
ENSIPUG00000005446	chd5	89	90.173	ENSEASG00005021464	CHD5	93	90.173	Equus_asinus_asinus
ENSIPUG00000005446	chd5	88	87.619	ENSECAG00000025043	CHD5	95	86.809	Equus_caballus
ENSIPUG00000005446	chd5	71	86.385	ENSEEUG00000002772	CHD5	70	83.410	Erinaceus_europaeus
ENSIPUG00000005446	chd5	97	83.776	ENSELUG00000010742	chd5	92	87.698	Esox_lucius
ENSIPUG00000005446	chd5	98	77.936	ENSFCAG00000006319	CHD5	94	78.249	Felis_catus
ENSIPUG00000005446	chd5	98	77.300	ENSFALG00000009740	CHD5	95	76.812	Ficedula_albicollis
ENSIPUG00000005446	chd5	98	78.263	ENSFDAG00000012881	CHD5	94	76.915	Fukomys_damarensis
ENSIPUG00000005446	chd5	98	77.221	ENSGALG00000000747	CHD5	94	77.472	Gallus_gallus
ENSIPUG00000005446	chd5	84	85.344	ENSGACG00000004389	chd5	97	84.383	Gasterosteus_aculeatus
ENSIPUG00000005446	chd5	90	89.767	ENSGAGG00000001590	CHD5	96	90.816	Gopherus_agassizii
ENSIPUG00000005446	chd5	98	76.948	ENSGGOG00000000708	CHD5	95	78.626	Gorilla_gorilla
ENSIPUG00000005446	chd5	97	81.544	ENSHBUG00000013453	chd5	96	81.925	Haplochromis_burtoni
ENSIPUG00000005446	chd5	98	78.706	ENSHGLG00000018184	CHD5	97	77.591	Heterocephalus_glaber_female
ENSIPUG00000005446	chd5	82	73.542	ENSHGLG00100013261	CHD5	94	71.367	Heterocephalus_glaber_male
ENSIPUG00000005446	chd5	98	79.232	ENSSTOG00000002778	CHD5	95	78.997	Ictidomys_tridecemlineatus
ENSIPUG00000005446	chd5	98	79.466	ENSJJAG00000019072	Chd5	94	78.962	Jaculus_jaculus
ENSIPUG00000005446	chd5	61	85.991	ENSLACG00000022233	-	99	84.761	Latimeria_chalumnae
ENSIPUG00000005446	chd5	99	84.341	ENSLOCG00000004944	chd5	94	83.324	Lepisosteus_oculatus
ENSIPUG00000005446	chd5	98	77.981	ENSLAFG00000006348	CHD5	100	77.396	Loxodonta_africana
ENSIPUG00000005446	chd5	98	77.044	ENSMFAG00000033993	CHD5	99	78.368	Macaca_fascicularis
ENSIPUG00000005446	chd5	98	78.489	ENSMMUG00000016838	CHD5	94	79.040	Macaca_mulatta
ENSIPUG00000005446	chd5	98	77.098	ENSMNEG00000040044	CHD5	94	78.400	Macaca_nemestrina
ENSIPUG00000005446	chd5	98	75.027	ENSMLEG00000039166	CHD5	95	75.322	Mandrillus_leucophaeus
ENSIPUG00000005446	chd5	97	79.578	ENSMZEG00005000841	chd5	94	85.290	Maylandia_zebra
ENSIPUG00000005446	chd5	98	76.860	ENSMGAG00000001055	CHD5	94	77.538	Meleagris_gallopavo
ENSIPUG00000005446	chd5	98	77.638	ENSMICG00000017862	CHD5	93	78.950	Microcebus_murinus
ENSIPUG00000005446	chd5	98	79.324	ENSMOCG00000011049	Chd5	94	79.282	Microtus_ochrogaster
ENSIPUG00000005446	chd5	77	86.614	ENSMODG00000006294	CHD5	66	83.333	Monodelphis_domestica
ENSIPUG00000005446	chd5	99	83.369	ENSMALG00000002831	chd5	96	83.620	Monopterus_albus
ENSIPUG00000005446	chd5	98	78.420	MGP_CAROLIEiJ_G0026857	Chd5	94	77.850	Mus_caroli
ENSIPUG00000005446	chd5	98	79.900	ENSMUSG00000005045	Chd5	94	79.350	Mus_musculus
ENSIPUG00000005446	chd5	98	79.867	MGP_PahariEiJ_G0029205	Chd5	94	79.337	Mus_pahari
ENSIPUG00000005446	chd5	98	79.900	MGP_SPRETEiJ_G0027850	Chd5	94	79.350	Mus_spretus
ENSIPUG00000005446	chd5	96	80.070	ENSMPUG00000007122	CHD5	87	82.227	Mustela_putorius_furo
ENSIPUG00000005446	chd5	98	77.694	ENSNGAG00000019812	Chd5	92	76.997	Nannospalax_galili
ENSIPUG00000005446	chd5	98	75.711	ENSNLEG00000010320	CHD5	95	76.336	Nomascus_leucogenys
ENSIPUG00000005446	chd5	83	77.519	ENSOPRG00000004304	CHD5	80	77.600	Ochotona_princeps
ENSIPUG00000005446	chd5	98	78.773	ENSODEG00000010262	CHD5	95	78.658	Octodon_degus
ENSIPUG00000005446	chd5	99	83.505	ENSONIG00000000619	chd5	95	82.966	Oreochromis_niloticus
ENSIPUG00000005446	chd5	98	67.011	ENSOANG00000001819	CHD5	96	66.361	Ornithorhynchus_anatinus
ENSIPUG00000005446	chd5	98	77.412	ENSOGAG00000005703	CHD5	94	78.261	Otolemur_garnettii
ENSIPUG00000005446	chd5	95	76.644	ENSOARG00000013425	CHD5	93	76.991	Ovis_aries
ENSIPUG00000005446	chd5	98	76.852	ENSPPAG00000034048	CHD5	95	78.583	Pan_paniscus
ENSIPUG00000005446	chd5	98	77.305	ENSPPRG00000009453	CHD5	94	76.944	Panthera_pardus
ENSIPUG00000005446	chd5	98	72.321	ENSPTIG00000013926	CHD5	95	73.287	Panthera_tigris_altaica
ENSIPUG00000005446	chd5	98	76.852	ENSPTRG00000000075	CHD5	94	78.583	Pan_troglodytes
ENSIPUG00000005446	chd5	98	77.098	ENSPANG00000006765	CHD5	94	78.400	Papio_anubis
ENSIPUG00000005446	chd5	98	86.166	ENSPKIG00000004282	chd5	98	85.827	Paramormyrops_kingsleyae
ENSIPUG00000005446	chd5	98	71.652	ENSPSIG00000006414	CHD5	98	71.910	Pelodiscus_sinensis
ENSIPUG00000005446	chd5	84	79.365	ENSPEMG00000014799	Chd5	92	82.446	Peromyscus_maniculatus_bairdii
ENSIPUG00000005446	chd5	99	78.389	ENSPCIG00000028310	CHD5	92	78.649	Phascolarctos_cinereus
ENSIPUG00000005446	chd5	93	90.909	ENSPLAG00000005343	chd5	96	81.658	Poecilia_latipinna
ENSIPUG00000005446	chd5	98	76.700	ENSPPYG00000001952	CHD5	95	79.026	Pongo_abelii
ENSIPUG00000005446	chd5	98	77.478	ENSPCOG00000022930	CHD5	94	78.467	Propithecus_coquereli
ENSIPUG00000005446	chd5	100	83.939	ENSPNYG00000003183	chd5	99	83.939	Pundamilia_nyererei
ENSIPUG00000005446	chd5	98	78.256	ENSRNOG00000011268	Chd5	95	77.730	Rattus_norvegicus
ENSIPUG00000005446	chd5	92	88.353	ENSRBIG00000032140	CHD5	96	78.270	Rhinopithecus_bieti
ENSIPUG00000005446	chd5	98	76.786	ENSRROG00000041146	CHD5	94	78.128	Rhinopithecus_roxellana
ENSIPUG00000005446	chd5	98	75.096	ENSSBOG00000001955	CHD5	98	80.229	Saimiri_boliviensis_boliviensis
ENSIPUG00000005446	chd5	98	72.717	ENSSHAG00000018641	CHD5	97	72.629	Sarcophilus_harrisii
ENSIPUG00000005446	chd5	99	84.876	ENSSFOG00015006296	chd5	96	82.616	Scleropages_formosus
ENSIPUG00000005446	chd5	97	84.452	ENSSDUG00000017526	chd5	97	84.571	Seriola_dumerili
ENSIPUG00000005446	chd5	90	84.706	ENSSPUG00000010622	CHD5	94	74.109	Sphenodon_punctatus
ENSIPUG00000005446	chd5	97	77.132	ENSSSCG00000003366	CHD5	99	78.497	Sus_scrofa
ENSIPUG00000005446	chd5	95	75.712	ENSTGUG00000002634	-	98	75.345	Taeniopygia_guttata
ENSIPUG00000005446	chd5	84	84.562	ENSTNIG00000004346	chd5	99	85.446	Tetraodon_nigroviridis
ENSIPUG00000005446	chd5	98	78.694	ENSTTRG00000010468	CHD5	94	78.623	Tursiops_truncatus
ENSIPUG00000005446	chd5	98	79.420	ENSUAMG00000024509	CHD5	92	88.293	Ursus_americanus
ENSIPUG00000005446	chd5	98	75.308	ENSUMAG00000024173	CHD5	95	75.014	Ursus_maritimus
ENSIPUG00000005446	chd5	85	92.000	ENSVVUG00000026480	CHD5	89	90.667	Vulpes_vulpes
ENSIPUG00000005446	chd5	98	75.151	ENSXETG00000002904	chd5	97	74.601	Xenopus_tropicalis
ENSIPUG00000005446	chd5	84	88.365	ENSXCOG00000014202	chd5	95	87.453	Xiphophorus_couchianus