EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000005537 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 1832 bases
Position: chr1:14758651-14760482
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000008034	RRM_1	PF00076.22	8.8e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000008388	-	387	-	ENSIPUP00000008034	128 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000005537's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000005537's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000005537	-	91	30.233	ENSIPUG00000021261	tial1	62	30.233
ENSIPUG00000005537	-	93	62.810	ENSIPUG00000024435	-	85	62.810
ENSIPUG00000005537	-	98	30.208	ENSIPUG00000014082	elavl1a	50	30.208
ENSIPUG00000005537	-	92	59.167	ENSIPUG00000006760	-	60	59.167
ENSIPUG00000005537	-	96	69.600	ENSIPUG00000010020	-	63	69.600
ENSIPUG00000005537	-	100	63.846	ENSIPUG00000008848	pabpc1a	52	63.846
ENSIPUG00000005537	-	64	30.952	ENSIPUG00000006525	rbm8a	52	31.325
ENSIPUG00000005537	-	94	31.148	ENSIPUG00000016702	tia1	68	31.148
ENSIPUG00000005537	-	92	59.167	ENSIPUG00000006780	-	58	59.167
ENSIPUG00000005537	-	100	63.077	ENSIPUG00000010791	-	54	63.077

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000005537	-	100	64.615	ENSG00000101104	PABPC1L	98	64.615	Homo_sapiens
ENSIPUG00000005537	-	100	63.846	ENSAMEG00000004099	PABPC1L	51	63.846	Ailuropoda_melanoleuca
ENSIPUG00000005537	-	100	60.000	ENSAPEG00000010558	-	60	61.290	Amphiprion_percula
ENSIPUG00000005537	-	100	64.615	ENSANAG00000026826	PABPC1L	53	64.615	Aotus_nancymaae
ENSIPUG00000005537	-	100	63.846	ENSBTAG00000055300	-	77	63.846	Bos_taurus
ENSIPUG00000005537	-	100	64.615	ENSCJAG00000017628	PABPC1L	53	64.615	Callithrix_jacchus
ENSIPUG00000005537	-	100	57.143	ENSCJAG00000038506	-	76	57.143	Callithrix_jacchus
ENSIPUG00000005537	-	100	64.615	ENSCAFG00020013828	PABPC1L	53	64.615	Canis_lupus_dingo
ENSIPUG00000005537	-	100	61.538	ENSTSYG00000006645	PABPC1L	53	61.538	Carlito_syrichta
ENSIPUG00000005537	-	100	63.846	ENSCCAG00000023338	PABPC1L	53	63.846	Cebus_capucinus
ENSIPUG00000005537	-	100	64.615	ENSCATG00000034065	PABPC1L	53	64.615	Cercocebus_atys
ENSIPUG00000005537	-	98	66.116	ENSCLAG00000005298	PABPC1L	51	66.116	Chinchilla_lanigera
ENSIPUG00000005537	-	100	60.769	ENSCPBG00000017755	-	60	60.769	Chrysemys_picta_bellii
ENSIPUG00000005537	-	99	59.690	ENSCSAVG00000003102	-	81	61.983	Ciona_savignyi
ENSIPUG00000005537	-	100	64.615	ENSCANG00000037530	PABPC1L	53	64.615	Colobus_angolensis_palliatus
ENSIPUG00000005537	-	100	58.462	ENSCVAG00000015943	-	86	58.462	Cyprinodon_variegatus
ENSIPUG00000005537	-	100	58.462	ENSDARG00000002597	pabpc1l	88	58.462	Danio_rerio
ENSIPUG00000005537	-	100	61.538	ENSDNOG00000048450	PABPC1L	53	61.538	Dasypus_novemcinctus
ENSIPUG00000005537	-	100	63.846	ENSEASG00005023408	-	77	63.846	Equus_asinus_asinus
ENSIPUG00000005537	-	100	63.846	ENSFCAG00000011692	PABPC1L	53	63.846	Felis_catus
ENSIPUG00000005537	-	100	60.000	ENSGALG00000004123	PABPC1L	64	60.000	Gallus_gallus
ENSIPUG00000005537	-	100	64.615	ENSGGOG00000004584	PABPC1L	53	64.615	Gorilla_gorilla
ENSIPUG00000005537	-	100	63.846	ENSHGLG00100019506	-	73	63.846	Heterocephalus_glaber_male
ENSIPUG00000005537	-	100	61.538	ENSSTOG00000003739	PABPC1L	53	61.538	Ictidomys_tridecemlineatus
ENSIPUG00000005537	-	100	62.308	ENSLAFG00000003553	PABPC1L	52	62.308	Loxodonta_africana
ENSIPUG00000005537	-	100	64.615	ENSMFAG00000040365	PABPC1L	53	64.615	Macaca_fascicularis
ENSIPUG00000005537	-	100	64.615	ENSMNEG00000032298	PABPC1L	53	64.615	Macaca_nemestrina
ENSIPUG00000005537	-	100	64.615	ENSMLEG00000043139	PABPC1L	53	64.615	Mandrillus_leucophaeus
ENSIPUG00000005537	-	100	60.000	ENSMMOG00000020574	-	90	59.231	Mola_mola
ENSIPUG00000005537	-	98	63.636	MGP_CAROLIEiJ_G0024627	Pabpc1l	52	63.636	Mus_caroli
ENSIPUG00000005537	-	98	63.636	ENSMUSG00000054582	Pabpc1l	52	63.636	Mus_musculus
ENSIPUG00000005537	-	98	62.903	MGP_PahariEiJ_G0026071	Pabpc1l	52	63.636	Mus_pahari
ENSIPUG00000005537	-	98	63.636	MGP_SPRETEiJ_G0025549	Pabpc1l	52	63.636	Mus_spretus
ENSIPUG00000005537	-	100	63.846	ENSMPUG00000017646	PABPC1L	52	63.846	Mustela_putorius_furo
ENSIPUG00000005537	-	100	64.615	ENSMLUG00000006324	PABPC1L	52	64.615	Myotis_lucifugus
ENSIPUG00000005537	-	98	63.636	ENSNGAG00000010458	Pabpc1l	52	63.636	Nannospalax_galili
ENSIPUG00000005537	-	100	56.154	ENSODEG00000002920	-	77	56.154	Octodon_degus
ENSIPUG00000005537	-	100	63.077	ENSOGAG00000032999	PABPC1L	52	63.077	Otolemur_garnettii
ENSIPUG00000005537	-	100	63.846	ENSPPRG00000019327	-	78	63.846	Panthera_pardus
ENSIPUG00000005537	-	98	65.854	ENSPTIG00000006524	PABPC1L	53	65.854	Panthera_tigris_altaica
ENSIPUG00000005537	-	100	64.615	ENSPTRG00000013531	PABPC1L	81	64.615	Pan_troglodytes
ENSIPUG00000005537	-	100	64.615	ENSPANG00000018788	PABPC1L	53	64.615	Papio_anubis
ENSIPUG00000005537	-	52	50.725	ENSPKIG00000016801	-	85	50.725	Paramormyrops_kingsleyae
ENSIPUG00000005537	-	100	61.538	ENSPKIG00000016810	-	92	61.538	Paramormyrops_kingsleyae
ENSIPUG00000005537	-	100	60.769	ENSPSIG00000013289	PABPC1L	64	60.769	Pelodiscus_sinensis
ENSIPUG00000005537	-	100	60.000	ENSPMGG00000023117	pabpc1l	90	59.231	Periophthalmus_magnuspinnatus
ENSIPUG00000005537	-	100	61.538	ENSPEMG00000020671	Pabpc1l	53	61.538	Peromyscus_maniculatus_bairdii
ENSIPUG00000005537	-	100	59.231	ENSPLAG00000023686	-	92	59.231	Poecilia_latipinna
ENSIPUG00000005537	-	100	59.231	ENSPMEG00000009185	-	88	59.231	Poecilia_mexicana
ENSIPUG00000005537	-	100	59.231	ENSPREG00000015886	pabpc1l	65	59.231	Poecilia_reticulata
ENSIPUG00000005537	-	100	64.615	ENSPPYG00000011042	PABPC1L	53	64.615	Pongo_abelii
ENSIPUG00000005537	-	100	63.077	ENSPCOG00000020630	PABPC1L	53	63.077	Propithecus_coquereli
ENSIPUG00000005537	-	100	63.846	ENSRBIG00000035381	PABPC1L	53	63.846	Rhinopithecus_bieti
ENSIPUG00000005537	-	100	64.615	ENSSBOG00000009532	-	53	64.615	Saimiri_boliviensis_boliviensis
ENSIPUG00000005537	-	100	60.000	ENSSMAG00000010516	pabpc1l	93	59.690	Scophthalmus_maximus
ENSIPUG00000005537	-	100	59.231	ENSSLDG00000006981	pabpc1l	54	59.231	Seriola_lalandi_dorsalis
ENSIPUG00000005537	-	100	63.077	ENSSSCG00000007382	PABPC1L	54	63.077	Sus_scrofa
ENSIPUG00000005537	-	100	63.846	ENSUAMG00000017682	PABPC1L	55	63.846	Ursus_americanus
ENSIPUG00000005537	-	98	72.727	ENSUMAG00000025436	PABPC1L	67	72.727	Ursus_maritimus
ENSIPUG00000005537	-	98	74.576	ENSVVUG00000018939	PABPC1L	55	74.576	Vulpes_vulpes
ENSIPUG00000005537	-	100	59.231	ENSXCOG00000005459	pabpc1l	92	59.231	Xiphophorus_couchianus