EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000005581 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 2528 bases
Position: chr10:1838047-1840574
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000008111	zf-C2H2	PF00096.26	2.7e-33	1	6
ENSIPUP00000008111	zf-C2H2	PF00096.26	2.7e-33	2	6
ENSIPUP00000008111	zf-C2H2	PF00096.26	2.7e-33	3	6
ENSIPUP00000008111	zf-C2H2	PF00096.26	2.7e-33	4	6
ENSIPUP00000008111	zf-C2H2	PF00096.26	2.7e-33	5	6
ENSIPUP00000008111	zf-C2H2	PF00096.26	2.7e-33	6	6
ENSIPUP00000008111	zf-met	PF12874.7	3.6e-10	1	2
ENSIPUP00000008111	zf-met	PF12874.7	3.6e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000008470	-	918	-	ENSIPUP00000008111	305 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000005581's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000005581's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000005581	-	71	45.699	ENSIPUG00000012109	ZN12	51	45.699
ENSIPUG00000005581	-	80	65.000	ENSIPUG00000015400	-	94	64.286
ENSIPUG00000005581	-	70	40.909	ENSIPUG00000005547	-	51	42.466
ENSIPUG00000005581	-	77	57.971	ENSIPUG00000002655	-	98	57.971
ENSIPUG00000005581	-	82	58.716	ENSIPUG00000021518	-	99	58.716
ENSIPUG00000005581	-	77	60.829	ENSIPUG00000021515	-	88	60.829
ENSIPUG00000005581	-	84	61.502	ENSIPUG00000015177	-	73	61.502
ENSIPUG00000005581	-	74	35.514	ENSIPUG00000015037	znf711	51	35.514
ENSIPUG00000005581	-	72	38.793	ENSIPUG00000000131	snai2	51	38.793
ENSIPUG00000005581	-	77	59.843	ENSIPUG00000021527	-	95	61.828
ENSIPUG00000005581	-	77	59.149	ENSIPUG00000017575	-	66	61.468
ENSIPUG00000005581	-	81	56.682	ENSIPUG00000013315	-	95	56.682
ENSIPUG00000005581	-	74	64.455	ENSIPUG00000013065	-	99	67.431
ENSIPUG00000005581	-	77	43.590	ENSIPUG00000008581	znf319b	87	43.590
ENSIPUG00000005581	-	91	59.677	ENSIPUG00000015203	-	70	59.677
ENSIPUG00000005581	-	77	59.633	ENSIPUG00000015121	-	59	59.633
ENSIPUG00000005581	-	71	33.488	ENSIPUG00000013526	-	71	33.488
ENSIPUG00000005581	-	74	57.676	ENSIPUG00000006936	-	93	58.553
ENSIPUG00000005581	-	77	62.626	ENSIPUG00000021472	-	76	62.626
ENSIPUG00000005581	-	72	42.727	ENSIPUG00000024011	-	52	42.667
ENSIPUG00000005581	-	81	34.197	ENSIPUG00000018102	znf646	66	34.742
ENSIPUG00000005581	-	77	70.068	ENSIPUG00000011073	-	98	70.068
ENSIPUG00000005581	-	78	58.065	ENSIPUG00000021434	-	93	58.065
ENSIPUG00000005581	-	78	44.651	ENSIPUG00000011652	znf648	77	45.699
ENSIPUG00000005581	-	71	61.345	ENSIPUG00000005339	-	83	61.345
ENSIPUG00000005581	-	80	66.667	ENSIPUG00000016075	-	96	62.981
ENSIPUG00000005581	-	69	41.912	ENSIPUG00000012830	-	77	41.912
ENSIPUG00000005581	-	89	66.667	ENSIPUG00000015468	-	79	66.667
ENSIPUG00000005581	-	70	32.500	ENSIPUG00000015844	snai1b	57	32.500
ENSIPUG00000005581	-	72	73.684	ENSIPUG00000007934	-	94	73.684
ENSIPUG00000005581	-	76	63.590	ENSIPUG00000023513	-	51	61.137
ENSIPUG00000005581	-	72	45.933	ENSIPUG00000007076	-	91	38.942
ENSIPUG00000005581	-	78	57.143	ENSIPUG00000005733	-	67	57.143
ENSIPUG00000005581	-	73	47.222	ENSIPUG00000019205	-	67	47.222
ENSIPUG00000005581	-	79	56.422	ENSIPUG00000021441	-	90	56.422
ENSIPUG00000005581	-	77	61.290	ENSIPUG00000006916	-	84	61.290
ENSIPUG00000005581	-	71	48.571	ENSIPUG00000022266	ZNF135	70	48.571
ENSIPUG00000005581	-	93	64.091	ENSIPUG00000023635	-	92	71.429
ENSIPUG00000005581	-	78	62.238	ENSIPUG00000021556	-	90	62.238
ENSIPUG00000005581	-	79	45.349	ENSIPUG00000004905	znf236	58	42.478
ENSIPUG00000005581	-	73	58.549	ENSIPUG00000004428	-	73	58.549
ENSIPUG00000005581	-	88	60.185	ENSIPUG00000015233	-	70	60.185
ENSIPUG00000005581	-	77	60.000	ENSIPUG00000022741	-	81	60.000
ENSIPUG00000005581	-	71	40.102	ENSIPUG00000003040	zbtb47a	81	40.102
ENSIPUG00000005581	-	77	43.125	ENSIPUG00000012769	gfi1b	51	43.125
ENSIPUG00000005581	-	80	41.919	ENSIPUG00000011258	-	85	41.919
ENSIPUG00000005581	-	85	32.716	ENSIPUG00000024004	-	93	32.716
ENSIPUG00000005581	-	88	41.667	ENSIPUG00000011399	zbtb47b	84	40.722
ENSIPUG00000005581	-	71	56.477	ENSIPUG00000023761	-	62	56.477
ENSIPUG00000005581	-	80	68.981	ENSIPUG00000023688	-	99	68.246
ENSIPUG00000005581	-	76	35.833	ENSIPUG00000002075	znf341	55	35.833
ENSIPUG00000005581	-	71	42.045	ENSIPUG00000021407	-	52	42.045
ENSIPUG00000005581	-	78	72.018	ENSIPUG00000021998	-	98	72.018
ENSIPUG00000005581	-	82	55.026	ENSIPUG00000003960	-	87	55.026
ENSIPUG00000005581	-	72	64.444	ENSIPUG00000021484	-	98	64.444
ENSIPUG00000005581	-	77	65.138	ENSIPUG00000022751	-	91	70.233
ENSIPUG00000005581	-	89	63.590	ENSIPUG00000015601	-	78	63.590
ENSIPUG00000005581	-	72	69.318	ENSIPUG00000012960	-	63	69.318
ENSIPUG00000005581	-	71	64.055	ENSIPUG00000009750	-	80	64.055
ENSIPUG00000005581	-	80	52.727	ENSIPUG00000016009	znf596	72	52.727
ENSIPUG00000005581	-	71	60.759	ENSIPUG00000001941	-	83	60.759
ENSIPUG00000005581	-	73	70.922	ENSIPUG00000015294	-	72	70.922
ENSIPUG00000005581	-	77	39.234	ENSIPUG00000001248	prdm5	73	40.230
ENSIPUG00000005581	-	78	32.065	ENSIPUG00000002510	-	71	32.065

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000005581	-	76	58.796	ENSATEG00000003344	-	76	58.796	Anabas_testudineus
ENSIPUG00000005581	-	77	54.286	ENSACLG00000011642	-	80	54.286	Astatotilapia_calliptera
ENSIPUG00000005581	-	78	51.515	ENSACLG00000019270	-	85	51.515	Astatotilapia_calliptera
ENSIPUG00000005581	-	71	45.498	ENSCING00000020618	-	91	45.498	Ciona_intestinalis
ENSIPUG00000005581	-	77	42.222	ENSCING00000000609	-	96	42.222	Ciona_intestinalis
ENSIPUG00000005581	-	71	52.830	ENSCING00000003072	-	95	52.830	Ciona_intestinalis
ENSIPUG00000005581	-	71	57.143	ENSDARG00000110710	CU210890.1	96	57.143	Danio_rerio
ENSIPUG00000005581	-	84	53.807	ENSDNOG00000045100	-	96	53.807	Dasypus_novemcinctus
ENSIPUG00000005581	-	87	50.282	ENSEBUG00000015661	-	88	50.000	Eptatretus_burgeri
ENSIPUG00000005581	-	71	41.475	ENSEBUG00000015155	-	70	41.475	Eptatretus_burgeri
ENSIPUG00000005581	-	76	64.352	MGP_CAROLIEiJ_G0015655	-	79	64.352	Mus_caroli
ENSIPUG00000005581	-	76	53.676	ENSSLDG00000005868	-	79	53.676	Seriola_lalandi_dorsalis
ENSIPUG00000005581	-	76	53.676	ENSSLDG00000006217	-	77	53.676	Seriola_lalandi_dorsalis