EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSIPUG00000005694 (Gene tree)
Gene ID
108273091
Gene Symbol
chd4
Alias
im:7143343|si:ch211-51m24.3
Full Name
chromodomain helicase DNA binding protein 4
Gene Type
protein_coding
Species
Ictalurus_punctatus
Status
putative
Strand
Plus strand
Length
29727 bases
Position
chr12:13034650-13064376
Accession
108273091
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSIPUP00000008697ResIIIPF04851.151.2e-0911
ENSIPUP00000008607ResIIIPF04851.151.4e-0911
ENSIPUP00000008647ResIIIPF04851.151.4e-0911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSIPUT00000009023-8567XM_017482091ENSIPUP000000086471946 (aa)XP_017337580A0A2D0S5T1
ENSIPUT00000008980-9251XM_017482090ENSIPUP000000086071946 (aa)XP_017337579A0A2D0S5T1
ENSIPUT00000009074-5610-ENSIPUP000000086971869 (aa)--
Gene Model
Click here to download ENSIPUG00000005694's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000005694's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSIPUG00000005694chd48180.255ENSIPUG00000003271chd38980.255
ENSIPUG00000005694chd49370.930ENSIPUG00000005446chd59570.906
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSIPUG00000005694chd49680.666ENSG00000111642CHD49983.398Homo_sapiens
ENSIPUG00000005694chd49369.016ENSAPOG00000020502-8473.261Acanthochromis_polyacanthus
ENSIPUG00000005694chd48798.636ENSAPOG00000008935chd4a9986.798Acanthochromis_polyacanthus
ENSIPUG00000005694chd49680.262ENSAMEG00000014179-9480.044Ailuropoda_melanoleuca
ENSIPUG00000005694chd49379.344ENSACIG00000012387-9578.652Amphilophus_citrinellus
ENSIPUG00000005694chd49784.701ENSACIG00000019310chd4a9593.173Amphilophus_citrinellus
ENSIPUG00000005694chd49980.324ENSAOCG00000000507-9980.385Amphiprion_ocellaris
ENSIPUG00000005694chd49486.937ENSAOCG00000016412-9987.013Amphiprion_ocellaris
ENSIPUG00000005694chd48987.692ENSAPEG00000005957-9978.478Amphiprion_percula
ENSIPUG00000005694chd49685.525ENSAPEG00000001757chd4a9985.774Amphiprion_percula
ENSIPUG00000005694chd48678.603ENSAPEG00000020306-9178.603Amphiprion_percula
ENSIPUG00000005694chd49370.022ENSATEG00000000976-9769.369Anabas_testudineus
ENSIPUG00000005694chd49982.437ENSATEG00000016428chd4a9692.653Anabas_testudineus
ENSIPUG00000005694chd48578.735ENSATEG00000021141-9878.669Anabas_testudineus
ENSIPUG00000005694chd49578.270ENSAPLG00000014146-9577.796Anas_platyrhynchos
ENSIPUG00000005694chd49579.413ENSACAG00000006231-9678.961Anolis_carolinensis
ENSIPUG00000005694chd49680.919ENSANAG00000035685-9680.098Aotus_nancymaae
ENSIPUG00000005694chd49584.428ENSACLG00000015837chd4a9983.587Astatotilapia_calliptera
ENSIPUG00000005694chd49781.376ENSACLG00000024468-9884.291Astatotilapia_calliptera
ENSIPUG00000005694chd49691.278ENSAMXG00000019969chd4a9890.670Astyanax_mexicanus
ENSIPUG00000005694chd49681.068ENSAMXG00000010614-9690.244Astyanax_mexicanus
ENSIPUG00000005694chd49580.913ENSBTAG00000014734CHD49580.293Bos_taurus
ENSIPUG00000005694chd49680.874ENSCJAG00000008114-9580.054Callithrix_jacchus
ENSIPUG00000005694chd49680.645ENSCAFG00000014929CHD49580.152Canis_familiaris
ENSIPUG00000005694chd49680.548ENSCAFG00020002892-9580.654Canis_lupus_dingo
ENSIPUG00000005694chd49581.023ENSCHIG00000020766-9680.000Capra_hircus
ENSIPUG00000005694chd49680.903ENSTSYG00000006069-9579.891Carlito_syrichta
ENSIPUG00000005694chd49580.437ENSCPOG00000008504-9680.152Cavia_porcellus
ENSIPUG00000005694chd49680.919ENSCCAG00000009686-9680.152Cebus_capucinus
ENSIPUG00000005694chd49680.700ENSCATG00000006345-9680.207Cercocebus_atys
ENSIPUG00000005694chd49580.968ENSCLAG00000012244-9580.098Chinchilla_lanigera
ENSIPUG00000005694chd49680.817ENSCSAG00000010429-9580.174Chlorocebus_sabaeus
ENSIPUG00000005694chd47495.575ENSCHOG00000000277-8492.742Choloepus_hoffmanni
ENSIPUG00000005694chd49581.195ENSCPBG00000027716-9180.228Chrysemys_picta_bellii
ENSIPUG00000005694chd48675.122ENSCSAVG00000004448-9962.051Ciona_savignyi
ENSIPUG00000005694chd48292.800ENSCANG00000035317-9579.284Colobus_angolensis_palliatus
ENSIPUG00000005694chd49580.229ENSCGRG00001020662Chd49579.386Cricetulus_griseus_chok1gshd
ENSIPUG00000005694chd49580.557ENSCGRG00000015920Chd49679.730Cricetulus_griseus_crigri
ENSIPUG00000005694chd48896.667ENSCSEG00000017173chd4a9395.885Cynoglossus_semilaevis
ENSIPUG00000005694chd49369.440ENSCSEG00000018096-9568.726Cynoglossus_semilaevis
ENSIPUG00000005694chd49781.033ENSCSEG00000019943-9981.022Cynoglossus_semilaevis
ENSIPUG00000005694chd49369.641ENSCVAG00000016412-8473.516Cyprinodon_variegatus
ENSIPUG00000005694chd49680.556ENSCVAG00000001128-9981.632Cyprinodon_variegatus
ENSIPUG00000005694chd48995.745ENSCVAG00000004940chd4a9695.745Cyprinodon_variegatus
ENSIPUG00000005694chd49985.291ENSDARG00000063535chd4a10085.495Danio_rerio
ENSIPUG00000005694chd49680.601ENSDNOG00000001134-9580.272Dasypus_novemcinctus
ENSIPUG00000005694chd49679.501ENSDORG00000001847Chd49479.652Dipodomys_ordii
ENSIPUG00000005694chd47873.121ENSEBUG00000012670chd4a9673.028Eptatretus_burgeri
ENSIPUG00000005694chd49680.919ENSEASG00005016150-9580.098Equus_asinus_asinus
ENSIPUG00000005694chd49680.797ENSECAG00000022005CHD49679.314Equus_caballus
ENSIPUG00000005694chd49580.939ENSELUG00000018086-9980.551Esox_lucius
ENSIPUG00000005694chd49386.791ENSELUG00000021276chd4a9495.851Esox_lucius
ENSIPUG00000005694chd49681.848ENSFCAG00000006877-9581.112Felis_catus
ENSIPUG00000005694chd47884.925ENSFALG00000004785-9184.324Ficedula_albicollis
ENSIPUG00000005694chd49578.525ENSFDAG00000020219-9578.054Fukomys_damarensis
ENSIPUG00000005694chd49682.656ENSFHEG00000002013chd4a9983.425Fundulus_heteroclitus
ENSIPUG00000005694chd48780.543ENSFHEG00000003253-8577.119Fundulus_heteroclitus
ENSIPUG00000005694chd49180.429ENSFHEG00000012736-9982.061Fundulus_heteroclitus
ENSIPUG00000005694chd45288.000ENSGMOG00000003394-7688.000Gadus_morhua
ENSIPUG00000005694chd45587.320ENSGMOG00000015722chd4a9587.320Gadus_morhua
ENSIPUG00000005694chd47397.619ENSGMOG00000017923-7985.366Gadus_morhua
ENSIPUG00000005694chd46181.898ENSGALG00000013565-9780.628Gallus_gallus
ENSIPUG00000005694chd49982.419ENSGAFG00000002778chd4a9982.622Gambusia_affinis
ENSIPUG00000005694chd48593.607ENSGAFG00000014337-9993.363Gambusia_affinis
ENSIPUG00000005694chd49978.281ENSGACG00000018705chd4a9980.423Gasterosteus_aculeatus
ENSIPUG00000005694chd45682.740ENSGACG00000010099-9683.534Gasterosteus_aculeatus
ENSIPUG00000005694chd49581.051ENSGAGG00000001416-9380.141Gopherus_agassizii
ENSIPUG00000005694chd49680.700ENSGGOG00000001930CHD49680.261Gorilla_gorilla
ENSIPUG00000005694chd49585.582ENSHBUG00000019146chd4a9289.894Haplochromis_burtoni
ENSIPUG00000005694chd49681.973ENSHBUG00000016000-9981.868Haplochromis_burtoni
ENSIPUG00000005694chd49580.273ENSHGLG00000003093-9580.207Heterocephalus_glaber_female
ENSIPUG00000005694chd49580.273ENSHGLG00100007450-9580.207Heterocephalus_glaber_male
ENSIPUG00000005694chd48980.036ENSHCOG00000017525-9687.500Hippocampus_comes
ENSIPUG00000005694chd48267.884ENSHCOG00000014308-7678.272Hippocampus_comes
ENSIPUG00000005694chd49580.911ENSSTOG00000007601-9579.880Ictidomys_tridecemlineatus
ENSIPUG00000005694chd49680.470ENSJJAG00000012394Chd49680.044Jaculus_jaculus
ENSIPUG00000005694chd49979.284ENSKMAG00000007932-9979.022Kryptolebias_marmoratus
ENSIPUG00000005694chd49369.647ENSKMAG00000017827-9577.215Kryptolebias_marmoratus
ENSIPUG00000005694chd49684.164ENSKMAG00000019286chd4a9791.200Kryptolebias_marmoratus
ENSIPUG00000005694chd47772.783ENSLBEG00000026652-9572.549Labrus_bergylta
ENSIPUG00000005694chd49979.820ENSLBEG00000012434CHD49979.421Labrus_bergylta
ENSIPUG00000005694chd49486.562ENSLOCG00000007438chd4a9978.153Lepisosteus_oculatus
ENSIPUG00000005694chd49677.983ENSLAFG00000022842-9577.307Loxodonta_africana
ENSIPUG00000005694chd49680.700ENSMFAG00000003188-9680.261Macaca_fascicularis
ENSIPUG00000005694chd49679.483ENSMMUG00000018685-9579.057Macaca_mulatta
ENSIPUG00000005694chd49678.953ENSMNEG00000044776-9678.358Macaca_nemestrina
ENSIPUG00000005694chd49679.301ENSMLEG00000024661-9678.847Mandrillus_leucophaeus
ENSIPUG00000005694chd49493.671ENSMAMG00000018954chd4a9493.671Mastacembelus_armatus
ENSIPUG00000005694chd48679.638ENSMAMG00000002137-7979.638Mastacembelus_armatus
ENSIPUG00000005694chd49979.008ENSMAMG00000002584-9388.755Mastacembelus_armatus
ENSIPUG00000005694chd49984.694ENSMZEG00005001706chd4a10084.307Maylandia_zebra
ENSIPUG00000005694chd49781.649ENSMZEG00005017761-9981.546Maylandia_zebra
ENSIPUG00000005694chd49580.568ENSMGAG00000014084-9580.032Meleagris_gallopavo
ENSIPUG00000005694chd49680.919ENSMICG00000006588-9680.152Microcebus_murinus
ENSIPUG00000005694chd49580.404ENSMOCG00000020624Chd49679.773Microtus_ochrogaster
ENSIPUG00000005694chd48268.324ENSMMOG00000013429-8173.443Mola_mola
ENSIPUG00000005694chd49683.912ENSMMOG00000000073chd4a9983.830Mola_mola
ENSIPUG00000005694chd49679.344ENSMMOG00000015971-9488.889Mola_mola
ENSIPUG00000005694chd48280.898ENSMODG00000018094-9981.290Monodelphis_domestica
ENSIPUG00000005694chd49980.050ENSMALG00000022494-9979.536Monopterus_albus
ENSIPUG00000005694chd49783.649ENSMALG00000005766chd4a9396.889Monopterus_albus
ENSIPUG00000005694chd49580.404ENSMUSG00000063870Chd49679.773Mus_musculus
ENSIPUG00000005694chd49280.277MGP_SPRETEiJ_G0029911Chd49679.633Mus_spretus
ENSIPUG00000005694chd49681.137ENSMPUG00000016859-9580.152Mustela_putorius_furo
ENSIPUG00000005694chd49681.069ENSMLUG00000014343-9579.989Myotis_lucifugus
ENSIPUG00000005694chd49579.605ENSNGAG00000016920Chd49578.023Nannospalax_galili
ENSIPUG00000005694chd49681.918ENSNBRG00000021576-9981.590Neolamprologus_brichardi
ENSIPUG00000005694chd49680.240ENSNLEG00000004330-9379.805Nomascus_leucogenys
ENSIPUG00000005694chd48393.548ENSMEUG00000015294-8193.548Notamacropus_eugenii
ENSIPUG00000005694chd48187.097ENSOPRG00000003477-7687.097Ochotona_princeps
ENSIPUG00000005694chd49680.932ENSODEG00000003114-9580.262Octodon_degus
ENSIPUG00000005694chd49984.796ENSONIG00000006992chd4a10084.272Oreochromis_niloticus
ENSIPUG00000005694chd49979.490ENSONIG00000012953-9979.969Oreochromis_niloticus
ENSIPUG00000005694chd49579.703ENSOCUG00000008215-9579.065Oryctolagus_cuniculus
ENSIPUG00000005694chd410083.927ENSORLG00000006310chd4a10083.782Oryzias_latipes
ENSIPUG00000005694chd49768.736ENSORLG00000017190-8080.631Oryzias_latipes
ENSIPUG00000005694chd49979.808ENSORLG00000012477-9980.519Oryzias_latipes
ENSIPUG00000005694chd48368.003ENSORLG00020011739-7578.642Oryzias_latipes_hni
ENSIPUG00000005694chd410083.927ENSORLG00020006529chd4a10083.782Oryzias_latipes_hni
ENSIPUG00000005694chd49979.757ENSORLG00020004891-9979.331Oryzias_latipes_hni
ENSIPUG00000005694chd49979.808ENSORLG00015010692-9981.140Oryzias_latipes_hsok
ENSIPUG00000005694chd410083.680ENSORLG00015019674chd4a10083.579Oryzias_latipes_hsok
ENSIPUG00000005694chd49366.704ENSOMEG00000014929-9280.455Oryzias_melastigma
ENSIPUG00000005694chd49780.260ENSOMEG00000013408-9481.374Oryzias_melastigma
ENSIPUG00000005694chd410083.629ENSOMEG00000016394chd4a9790.196Oryzias_melastigma
ENSIPUG00000005694chd49679.688ENSOGAG00000010031-9578.675Otolemur_garnettii
ENSIPUG00000005694chd49580.934ENSOARG00000007398-9780.206Ovis_aries
ENSIPUG00000005694chd49680.721ENSPPAG00000029007-9580.282Pan_paniscus
ENSIPUG00000005694chd49680.830ENSPPRG00000001388-9580.240Panthera_pardus
ENSIPUG00000005694chd49680.645ENSPTIG00000010979-9580.152Panthera_tigris_altaica
ENSIPUG00000005694chd49680.700ENSPTRG00000004580CHD49680.261Pan_troglodytes
ENSIPUG00000005694chd49680.776ENSPANG00000025409-9680.261Papio_anubis
ENSIPUG00000005694chd49674.388ENSPKIG00000012023-9973.301Paramormyrops_kingsleyae
ENSIPUG00000005694chd49984.592ENSPKIG00000008268chd4a10083.157Paramormyrops_kingsleyae
ENSIPUG00000005694chd49678.853ENSPSIG00000015546-9578.698Pelodiscus_sinensis
ENSIPUG00000005694chd47982.530ENSPMGG00000007681-8582.530Periophthalmus_magnuspinnatus
ENSIPUG00000005694chd49384.142ENSPMGG00000022981chd4a9784.607Periophthalmus_magnuspinnatus
ENSIPUG00000005694chd49579.657ENSPEMG00000010290Chd49578.595Peromyscus_maniculatus_bairdii
ENSIPUG00000005694chd49381.060ENSPCIG00000001846-9980.958Phascolarctos_cinereus
ENSIPUG00000005694chd49778.497ENSPFOG00000013889-9978.466Poecilia_formosa
ENSIPUG00000005694chd49984.906ENSPFOG00000009089chd4a9984.705Poecilia_formosa
ENSIPUG00000005694chd48768.099ENSPFOG00000016981-9566.799Poecilia_formosa
ENSIPUG00000005694chd49981.862ENSPLAG00000012712chd4a9598.500Poecilia_latipinna
ENSIPUG00000005694chd49979.141ENSPLAG00000004006-9979.019Poecilia_latipinna
ENSIPUG00000005694chd49097.758ENSPMEG00000009633chd4a9597.758Poecilia_mexicana
ENSIPUG00000005694chd49370.698ENSPMEG00000015657-8374.127Poecilia_mexicana
ENSIPUG00000005694chd49778.094ENSPMEG00000006064-9978.420Poecilia_mexicana
ENSIPUG00000005694chd49979.154ENSPREG00000011359-9978.831Poecilia_reticulata
ENSIPUG00000005694chd49098.500ENSPREG00000001202chd4a9598.500Poecilia_reticulata
ENSIPUG00000005694chd49069.289ENSPREG00000014285-7781.325Poecilia_reticulata
ENSIPUG00000005694chd49678.691ENSPPYG00000004192-9678.268Pongo_abelii
ENSIPUG00000005694chd47389.157ENSPCAG00000007120-8588.855Procavia_capensis
ENSIPUG00000005694chd49580.947ENSPCOG00000018635-9680.152Propithecus_coquereli
ENSIPUG00000005694chd49679.731ENSPVAG00000012574-9778.885Pteropus_vampyrus
ENSIPUG00000005694chd49685.317ENSPNYG00000002663chd4a9884.632Pundamilia_nyererei
ENSIPUG00000005694chd49979.486ENSPNYG00000023020-9979.505Pundamilia_nyererei
ENSIPUG00000005694chd49780.140ENSPNAG00000011129-9979.601Pygocentrus_nattereri
ENSIPUG00000005694chd410092.725ENSPNAG00000009629chd4a10092.879Pygocentrus_nattereri
ENSIPUG00000005694chd49978.245ENSRNOG00000018309Chd49679.461Rattus_norvegicus
ENSIPUG00000005694chd49380.339ENSRBIG00000041491-9579.888Rhinopithecus_bieti
ENSIPUG00000005694chd49680.668ENSRROG00000042446-9680.207Rhinopithecus_roxellana
ENSIPUG00000005694chd49681.713ENSSBOG00000020782-9680.502Saimiri_boliviensis_boliviensis
ENSIPUG00000005694chd47586.957ENSSHAG00000015079-9086.957Sarcophilus_harrisii
ENSIPUG00000005694chd410085.081ENSSFOG00015002908chd49792.829Scleropages_formosus
ENSIPUG00000005694chd49982.843ENSSMAG00000012594chd4a9985.097Scophthalmus_maximus
ENSIPUG00000005694chd49482.806ENSSMAG00000010969-9781.686Scophthalmus_maximus
ENSIPUG00000005694chd49367.962ENSSMAG00000017926-9169.684Scophthalmus_maximus
ENSIPUG00000005694chd49583.110ENSSDUG00000012051-9782.310Seriola_dumerili
ENSIPUG00000005694chd49386.788ENSSDUG00000002891chd4a9786.273Seriola_dumerili
ENSIPUG00000005694chd49369.719ENSSLDG00000019750-9568.872Seriola_lalandi_dorsalis
ENSIPUG00000005694chd49980.419ENSSLDG00000018645chd4a9782.689Seriola_lalandi_dorsalis
ENSIPUG00000005694chd49978.417ENSSLDG00000023821-9389.741Seriola_lalandi_dorsalis
ENSIPUG00000005694chd46495.954ENSSARG00000012988-6395.954Sorex_araneus
ENSIPUG00000005694chd49580.447ENSSPUG00000015131-9579.624Sphenodon_punctatus
ENSIPUG00000005694chd49093.953ENSSPAG00000013983chd4a9984.789Stegastes_partitus
ENSIPUG00000005694chd49370.051ENSSPAG00000018749-9469.580Stegastes_partitus
ENSIPUG00000005694chd49680.960ENSSSCG00000000697-9580.207Sus_scrofa
ENSIPUG00000005694chd49679.828ENSTGUG00000013329-9579.828Taeniopygia_guttata
ENSIPUG00000005694chd49579.933ENSTRUG00000007202-9980.353Takifugu_rubripes
ENSIPUG00000005694chd48481.279ENSTRUG00000007623-9081.279Takifugu_rubripes
ENSIPUG00000005694chd49780.788ENSTNIG00000008031-9981.178Tetraodon_nigroviridis
ENSIPUG00000005694chd49870.402ENSTNIG00000004095-8486.213Tetraodon_nigroviridis
ENSIPUG00000005694chd48480.110ENSTBEG00000011379-8980.536Tupaia_belangeri
ENSIPUG00000005694chd49594.872ENSTTRG00000016102-9775.013Tursiops_truncatus
ENSIPUG00000005694chd49680.467ENSUAMG00000016452-9687.363Ursus_americanus
ENSIPUG00000005694chd49188.235ENSUMAG00000005336-9488.235Ursus_maritimus
ENSIPUG00000005694chd49680.668ENSVVUG00000011414-9580.152Vulpes_vulpes
ENSIPUG00000005694chd45277.277ENSXETG00000018961-9575.345Xenopus_tropicalis
ENSIPUG00000005694chd46482.609ENSXETG00000026410chd49987.982Xenopus_tropicalis
ENSIPUG00000005694chd49778.849ENSXCOG00000019269-9979.208Xiphophorus_couchianus
ENSIPUG00000005694chd47788.302ENSXMAG00000001037chd4a9983.467Xiphophorus_maculatus
ENSIPUG00000005694chd49778.740ENSXMAG00000011263-9979.153Xiphophorus_maculatus
ENSIPUG00000005694chd48480.631ENSXMAG00000014686-9267.821Xiphophorus_maculatus

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