EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000005695 (Gene tree)
Gene ID: 108268824
Gene Symbol: edc3
Alias: im:7151288|lsm16|wu:fb82d07|yjdc|zgc:112006
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 9840 bases
Position: chr8:16702480-16712319
Accession: 108268824
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000008268	FDF	PF09532.10	2.9e-10	1	1
ENSIPUP00000008257	FDF	PF09532.10	2.9e-10	1	1
ENSIPUP00000008268	LSM14	PF12701.7	5e-11	1	1
ENSIPUP00000008257	LSM14	PF12701.7	5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000008631	-	5906	XM_017474059	ENSIPUP00000008268	498 (aa)	XP_017329548	A0A2D0RG88
ENSIPUT00000008620	-	1760	-	ENSIPUP00000008257	499 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000005695's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000005695's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000005695	edc3	100	70.450	ENSG00000179151	EDC3	100	77.778	Homo_sapiens
ENSIPUG00000005695	edc3	99	58.858	ENSAPOG00000008655	EDC3	99	58.858	Acanthochromis_polyacanthus
ENSIPUG00000005695	edc3	100	80.522	ENSAPOG00000010791	edc3	99	80.522	Acanthochromis_polyacanthus
ENSIPUG00000005695	edc3	100	70.254	ENSAMEG00000008963	EDC3	99	70.254	Ailuropoda_melanoleuca
ENSIPUG00000005695	edc3	100	78.514	ENSACIG00000017751	edc3	99	78.514	Amphilophus_citrinellus
ENSIPUG00000005695	edc3	100	65.476	ENSACIG00000005330	EDC3	99	65.476	Amphilophus_citrinellus
ENSIPUG00000005695	edc3	100	80.522	ENSAOCG00000005431	edc3	99	80.522	Amphiprion_ocellaris
ENSIPUG00000005695	edc3	99	63.147	ENSAOCG00000009103	-	99	63.147	Amphiprion_ocellaris
ENSIPUG00000005695	edc3	99	62.874	ENSAPEG00000007841	EDC3	99	62.874	Amphiprion_percula
ENSIPUG00000005695	edc3	100	80.522	ENSAPEG00000000968	edc3	99	80.522	Amphiprion_percula
ENSIPUG00000005695	edc3	100	79.920	ENSATEG00000015505	edc3	99	79.920	Anabas_testudineus
ENSIPUG00000005695	edc3	99	64.811	ENSATEG00000004205	-	99	64.811	Anabas_testudineus
ENSIPUG00000005695	edc3	89	69.869	ENSAPLG00000008957	EDC3	99	69.869	Anas_platyrhynchos
ENSIPUG00000005695	edc3	78	67.669	ENSACAG00000000460	-	100	67.669	Anolis_carolinensis
ENSIPUG00000005695	edc3	100	69.863	ENSANAG00000024078	EDC3	99	69.863	Aotus_nancymaae
ENSIPUG00000005695	edc3	100	62.823	ENSACLG00000018776	-	99	62.823	Astatotilapia_calliptera
ENSIPUG00000005695	edc3	100	79.116	ENSACLG00000007232	edc3	99	79.116	Astatotilapia_calliptera
ENSIPUG00000005695	edc3	100	89.662	ENSAMXG00000001589	edc3	99	89.662	Astyanax_mexicanus
ENSIPUG00000005695	edc3	100	70.254	ENSBTAG00000007308	EDC3	99	70.254	Bos_taurus
ENSIPUG00000005695	edc3	100	70.059	ENSCJAG00000017681	EDC3	99	70.059	Callithrix_jacchus
ENSIPUG00000005695	edc3	100	69.863	ENSCAFG00000017935	EDC3	99	70.059	Canis_familiaris
ENSIPUG00000005695	edc3	100	69.863	ENSCAFG00020003909	EDC3	99	70.059	Canis_lupus_dingo
ENSIPUG00000005695	edc3	100	70.450	ENSCHIG00000023658	EDC3	99	70.450	Capra_hircus
ENSIPUG00000005695	edc3	100	70.727	ENSTSYG00000004822	EDC3	99	70.727	Carlito_syrichta
ENSIPUG00000005695	edc3	100	70.530	ENSCPOG00000015595	EDC3	99	70.530	Cavia_porcellus
ENSIPUG00000005695	edc3	100	70.059	ENSCCAG00000021663	EDC3	99	70.059	Cebus_capucinus
ENSIPUG00000005695	edc3	100	69.745	ENSCATG00000037511	EDC3	99	69.745	Cercocebus_atys
ENSIPUG00000005695	edc3	100	70.727	ENSCLAG00000005700	EDC3	99	70.727	Chinchilla_lanigera
ENSIPUG00000005695	edc3	100	69.745	ENSCSAG00000014239	EDC3	99	69.745	Chlorocebus_sabaeus
ENSIPUG00000005695	edc3	100	70.097	ENSCPBG00000024239	EDC3	99	70.097	Chrysemys_picta_bellii
ENSIPUG00000005695	edc3	99	39.499	ENSCING00000022142	-	99	39.499	Ciona_intestinalis
ENSIPUG00000005695	edc3	100	69.745	ENSCANG00000028699	EDC3	99	69.745	Colobus_angolensis_palliatus
ENSIPUG00000005695	edc3	100	70.450	ENSCGRG00001013874	Edc3	99	70.450	Cricetulus_griseus_chok1gshd
ENSIPUG00000005695	edc3	100	70.450	ENSCGRG00000011885	Edc3	99	70.450	Cricetulus_griseus_crigri
ENSIPUG00000005695	edc3	100	78.916	ENSCSEG00000012996	edc3	99	78.916	Cynoglossus_semilaevis
ENSIPUG00000005695	edc3	100	77.912	ENSCVAG00000008023	edc3	99	77.912	Cyprinodon_variegatus
ENSIPUG00000005695	edc3	100	83.168	ENSDARG00000051931	edc3	99	83.366	Danio_rerio
ENSIPUG00000005695	edc3	100	62.257	ENSDNOG00000030661	EDC3	99	62.257	Dasypus_novemcinctus
ENSIPUG00000005695	edc3	66	77.778	ENSETEG00000002398	-	64	77.778	Echinops_telfairi
ENSIPUG00000005695	edc3	100	69.863	ENSEASG00005005071	EDC3	99	69.863	Equus_asinus_asinus
ENSIPUG00000005695	edc3	100	69.863	ENSECAG00000017994	EDC3	99	69.863	Equus_caballus
ENSIPUG00000005695	edc3	100	73.705	ENSELUG00000005794	edc3	99	73.705	Esox_lucius
ENSIPUG00000005695	edc3	100	68.056	ENSELUG00000007607	EDC3	99	68.056	Esox_lucius
ENSIPUG00000005695	edc3	100	70.059	ENSFCAG00000002014	EDC3	99	70.059	Felis_catus
ENSIPUG00000005695	edc3	98	68.390	ENSFALG00000004543	EDC3	96	68.390	Ficedula_albicollis
ENSIPUG00000005695	edc3	100	70.254	ENSFDAG00000012582	EDC3	99	70.254	Fukomys_damarensis
ENSIPUG00000005695	edc3	100	78.916	ENSFHEG00000009375	edc3	99	78.916	Fundulus_heteroclitus
ENSIPUG00000005695	edc3	100	78.000	ENSGMOG00000002715	edc3	99	78.600	Gadus_morhua
ENSIPUG00000005695	edc3	100	70.254	ENSGALG00000040181	EDC3	99	70.254	Gallus_gallus
ENSIPUG00000005695	edc3	100	77.510	ENSGAFG00000014433	edc3	99	77.711	Gambusia_affinis
ENSIPUG00000005695	edc3	100	78.514	ENSGACG00000009783	edc3	99	78.514	Gasterosteus_aculeatus
ENSIPUG00000005695	edc3	100	61.644	ENSGACG00000014671	EDC3	99	62.157	Gasterosteus_aculeatus
ENSIPUG00000005695	edc3	100	70.254	ENSGAGG00000023477	EDC3	99	70.059	Gopherus_agassizii
ENSIPUG00000005695	edc3	100	70.450	ENSGGOG00000003552	EDC3	99	70.450	Gorilla_gorilla
ENSIPUG00000005695	edc3	100	62.823	ENSHBUG00000020817	EDC3	99	62.823	Haplochromis_burtoni
ENSIPUG00000005695	edc3	100	79.116	ENSHBUG00000003635	edc3	99	79.116	Haplochromis_burtoni
ENSIPUG00000005695	edc3	100	76.400	ENSHCOG00000016834	edc3	99	77.200	Hippocampus_comes
ENSIPUG00000005695	edc3	100	70.254	ENSSTOG00000013936	EDC3	99	70.254	Ictidomys_tridecemlineatus
ENSIPUG00000005695	edc3	100	69.667	ENSJJAG00000008074	Edc3	99	69.667	Jaculus_jaculus
ENSIPUG00000005695	edc3	100	79.317	ENSKMAG00000001243	edc3	99	79.317	Kryptolebias_marmoratus
ENSIPUG00000005695	edc3	99	61.493	ENSKMAG00000001987	EDC3	99	61.493	Kryptolebias_marmoratus
ENSIPUG00000005695	edc3	100	79.116	ENSLBEG00000013435	edc3	99	79.116	Labrus_bergylta
ENSIPUG00000005695	edc3	100	62.425	ENSLBEG00000017984	EDC3	99	62.425	Labrus_bergylta
ENSIPUG00000005695	edc3	100	71.622	ENSLACG00000014149	EDC3	99	71.622	Latimeria_chalumnae
ENSIPUG00000005695	edc3	100	72.763	ENSLOCG00000014625	edc3	99	73.161	Lepisosteus_oculatus
ENSIPUG00000005695	edc3	100	70.866	ENSLAFG00000002992	EDC3	99	70.866	Loxodonta_africana
ENSIPUG00000005695	edc3	100	69.941	ENSMFAG00000043074	EDC3	99	70.254	Macaca_fascicularis
ENSIPUG00000005695	edc3	100	69.941	ENSMMUG00000011071	EDC3	99	70.254	Macaca_mulatta
ENSIPUG00000005695	edc3	100	69.941	ENSMNEG00000035316	EDC3	99	70.254	Macaca_nemestrina
ENSIPUG00000005695	edc3	100	69.745	ENSMLEG00000030372	EDC3	99	69.745	Mandrillus_leucophaeus
ENSIPUG00000005695	edc3	100	80.321	ENSMAMG00000000505	edc3	99	80.321	Mastacembelus_armatus
ENSIPUG00000005695	edc3	99	64.471	ENSMAMG00000005423	-	99	64.471	Mastacembelus_armatus
ENSIPUG00000005695	edc3	100	63.618	ENSMZEG00005005654	EDC3	99	63.618	Maylandia_zebra
ENSIPUG00000005695	edc3	100	79.317	ENSMZEG00005004892	edc3	99	79.317	Maylandia_zebra
ENSIPUG00000005695	edc3	100	69.625	ENSMGAG00000002617	EDC3	99	69.625	Meleagris_gallopavo
ENSIPUG00000005695	edc3	100	70.841	ENSMICG00000043190	EDC3	99	70.841	Microcebus_murinus
ENSIPUG00000005695	edc3	100	70.450	ENSMOCG00000016205	Edc3	99	70.450	Microtus_ochrogaster
ENSIPUG00000005695	edc3	100	79.719	ENSMMOG00000012278	edc3	99	79.719	Mola_mola
ENSIPUG00000005695	edc3	100	69.981	ENSMODG00000009442	EDC3	99	69.981	Monodelphis_domestica
ENSIPUG00000005695	edc3	100	80.120	ENSMALG00000008658	edc3	99	80.120	Monopterus_albus
ENSIPUG00000005695	edc3	100	69.745	MGP_CAROLIEiJ_G0032280	Edc3	100	76.923	Mus_caroli
ENSIPUG00000005695	edc3	100	69.745	ENSMUSG00000038957	Edc3	100	76.923	Mus_musculus
ENSIPUG00000005695	edc3	100	69.745	MGP_PahariEiJ_G0015146	Edc3	100	76.923	Mus_pahari
ENSIPUG00000005695	edc3	100	69.548	MGP_SPRETEiJ_G0033420	Edc3	100	76.923	Mus_spretus
ENSIPUG00000005695	edc3	100	70.254	ENSMPUG00000017293	EDC3	99	70.254	Mustela_putorius_furo
ENSIPUG00000005695	edc3	100	70.370	ENSMLUG00000016382	EDC3	99	70.370	Myotis_lucifugus
ENSIPUG00000005695	edc3	100	69.667	ENSNGAG00000010923	Edc3	99	69.667	Nannospalax_galili
ENSIPUG00000005695	edc3	100	78.715	ENSNBRG00000002434	edc3	99	78.715	Neolamprologus_brichardi
ENSIPUG00000005695	edc3	100	64.016	ENSNBRG00000007881	EDC3	99	64.016	Neolamprologus_brichardi
ENSIPUG00000005695	edc3	100	60.861	ENSNLEG00000014577	EDC3	99	60.861	Nomascus_leucogenys
ENSIPUG00000005695	edc3	100	70.450	ENSMEUG00000009077	EDC3	99	70.450	Notamacropus_eugenii
ENSIPUG00000005695	edc3	81	77.778	ENSOPRG00000009540	-	78	77.778	Ochotona_princeps
ENSIPUG00000005695	edc3	100	63.158	ENSONIG00000002932	-	99	63.158	Oreochromis_niloticus
ENSIPUG00000005695	edc3	100	79.317	ENSONIG00000008434	edc3	99	79.317	Oreochromis_niloticus
ENSIPUG00000005695	edc3	78	67.337	ENSOCUG00000017740	EDC3	86	67.337	Oryctolagus_cuniculus
ENSIPUG00000005695	edc3	99	61.829	ENSORLG00000014399	-	98	61.829	Oryzias_latipes
ENSIPUG00000005695	edc3	100	76.707	ENSORLG00000004883	edc3	99	76.707	Oryzias_latipes
ENSIPUG00000005695	edc3	99	61.829	ENSORLG00020019446	-	99	61.829	Oryzias_latipes_hni
ENSIPUG00000005695	edc3	100	77.108	ENSORLG00020012262	edc3	99	77.108	Oryzias_latipes_hni
ENSIPUG00000005695	edc3	100	77.108	ENSORLG00015005634	edc3	99	77.108	Oryzias_latipes_hsok
ENSIPUG00000005695	edc3	99	62.028	ENSORLG00015017635	-	95	62.028	Oryzias_latipes_hsok
ENSIPUG00000005695	edc3	99	61.677	ENSOMEG00000017354	EDC3	99	61.677	Oryzias_melastigma
ENSIPUG00000005695	edc3	100	77.711	ENSOMEG00000014026	edc3	99	77.711	Oryzias_melastigma
ENSIPUG00000005695	edc3	100	70.059	ENSOGAG00000014441	EDC3	99	70.450	Otolemur_garnettii
ENSIPUG00000005695	edc3	100	69.727	ENSOARG00000003476	EDC3	99	70.117	Ovis_aries
ENSIPUG00000005695	edc3	100	70.450	ENSPPAG00000040143	EDC3	99	70.450	Pan_paniscus
ENSIPUG00000005695	edc3	100	70.254	ENSPPRG00000006257	EDC3	99	70.254	Panthera_pardus
ENSIPUG00000005695	edc3	100	70.254	ENSPTIG00000017424	EDC3	99	70.254	Panthera_tigris_altaica
ENSIPUG00000005695	edc3	100	70.450	ENSPTRG00000007279	EDC3	99	70.450	Pan_troglodytes
ENSIPUG00000005695	edc3	100	69.745	ENSPANG00000015997	EDC3	99	69.745	Papio_anubis
ENSIPUG00000005695	edc3	100	74.606	ENSPKIG00000004416	edc3	99	74.606	Paramormyrops_kingsleyae
ENSIPUG00000005695	edc3	99	75.100	ENSPKIG00000019810	EDC3	99	75.100	Paramormyrops_kingsleyae
ENSIPUG00000005695	edc3	100	65.029	ENSPSIG00000008474	EDC3	99	65.422	Pelodiscus_sinensis
ENSIPUG00000005695	edc3	100	78.088	ENSPMGG00000007223	edc3	99	78.088	Periophthalmus_magnuspinnatus
ENSIPUG00000005695	edc3	100	70.530	ENSPEMG00000015260	Edc3	99	70.530	Peromyscus_maniculatus_bairdii
ENSIPUG00000005695	edc3	100	70.059	ENSPCIG00000006276	EDC3	70	70.059	Phascolarctos_cinereus
ENSIPUG00000005695	edc3	100	78.313	ENSPFOG00000012204	edc3	99	78.313	Poecilia_formosa
ENSIPUG00000005695	edc3	100	78.313	ENSPLAG00000014420	edc3	99	78.313	Poecilia_latipinna
ENSIPUG00000005695	edc3	100	78.313	ENSPMEG00000023289	edc3	99	78.313	Poecilia_mexicana
ENSIPUG00000005695	edc3	100	78.514	ENSPREG00000016022	edc3	99	78.514	Poecilia_reticulata
ENSIPUG00000005695	edc3	100	69.276	ENSPPYG00000006642	EDC3	99	69.276	Pongo_abelii
ENSIPUG00000005695	edc3	90	77.778	ENSPCAG00000002802	EDC3	88	77.778	Procavia_capensis
ENSIPUG00000005695	edc3	100	70.450	ENSPCOG00000013364	EDC3	99	70.450	Propithecus_coquereli
ENSIPUG00000005695	edc3	100	70.530	ENSPVAG00000014733	EDC3	99	70.727	Pteropus_vampyrus
ENSIPUG00000005695	edc3	100	79.116	ENSPNYG00000021797	edc3	99	79.116	Pundamilia_nyererei
ENSIPUG00000005695	edc3	100	62.823	ENSPNYG00000009669	EDC3	99	62.823	Pundamilia_nyererei
ENSIPUG00000005695	edc3	100	89.264	ENSPNAG00000019657	edc3	99	89.264	Pygocentrus_nattereri
ENSIPUG00000005695	edc3	99	69.685	ENSRNOG00000019579	Edc3	99	69.685	Rattus_norvegicus
ENSIPUG00000005695	edc3	100	69.745	ENSRBIG00000019488	EDC3	99	69.745	Rhinopithecus_bieti
ENSIPUG00000005695	edc3	100	69.745	ENSRROG00000034959	EDC3	99	69.745	Rhinopithecus_roxellana
ENSIPUG00000005695	edc3	100	70.138	ENSSBOG00000004896	EDC3	99	70.138	Saimiri_boliviensis_boliviensis
ENSIPUG00000005695	edc3	96	69.919	ENSSHAG00000015075	EDC3	97	68.515	Sarcophilus_harrisii
ENSIPUG00000005695	edc3	99	79.084	ENSSFOG00015016939	edc3	99	80.159	Scleropages_formosus
ENSIPUG00000005695	edc3	100	71.571	ENSSFOG00015002439	edc3	99	72.222	Scleropages_formosus
ENSIPUG00000005695	edc3	100	79.116	ENSSMAG00000010695	edc3	99	79.116	Scophthalmus_maximus
ENSIPUG00000005695	edc3	99	65.010	ENSSMAG00000010176	-	99	65.010	Scophthalmus_maximus
ENSIPUG00000005695	edc3	99	66.068	ENSSDUG00000007671	EDC3	99	66.068	Seriola_dumerili
ENSIPUG00000005695	edc3	100	80.522	ENSSDUG00000021844	edc3	99	81.325	Seriola_dumerili
ENSIPUG00000005695	edc3	100	80.522	ENSSLDG00000022046	edc3	99	81.325	Seriola_lalandi_dorsalis
ENSIPUG00000005695	edc3	80	79.352	ENSSARG00000003907	EDC3	80	79.352	Sorex_araneus
ENSIPUG00000005695	edc3	100	68.616	ENSSPUG00000008232	EDC3	99	68.616	Sphenodon_punctatus
ENSIPUG00000005695	edc3	99	63.673	ENSSPAG00000020327	EDC3	99	64.271	Stegastes_partitus
ENSIPUG00000005695	edc3	100	80.522	ENSSPAG00000010009	edc3	99	80.522	Stegastes_partitus
ENSIPUG00000005695	edc3	100	70.059	ENSSSCG00000001903	EDC3	99	70.059	Sus_scrofa
ENSIPUG00000005695	edc3	100	70.059	ENSTGUG00000004007	EDC3	99	70.059	Taeniopygia_guttata
ENSIPUG00000005695	edc3	100	78.916	ENSTRUG00000017078	edc3	99	78.916	Takifugu_rubripes
ENSIPUG00000005695	edc3	100	77.800	ENSTNIG00000016047	edc3	99	77.800	Tetraodon_nigroviridis
ENSIPUG00000005695	edc3	100	70.588	ENSTTRG00000007990	EDC3	99	70.588	Tursiops_truncatus
ENSIPUG00000005695	edc3	100	70.254	ENSUAMG00000026710	-	99	70.254	Ursus_americanus
ENSIPUG00000005695	edc3	100	70.254	ENSUMAG00000005006	EDC3	95	70.254	Ursus_maritimus
ENSIPUG00000005695	edc3	81	68.519	ENSVPAG00000003499	-	78	68.519	Vicugna_pacos
ENSIPUG00000005695	edc3	100	70.059	ENSVVUG00000018601	EDC3	99	70.059	Vulpes_vulpes
ENSIPUG00000005695	edc3	70	74.499	ENSXETG00000010622	edc3	99	75.358	Xenopus_tropicalis
ENSIPUG00000005695	edc3	100	78.715	ENSXMAG00000007377	edc3	99	78.715	Xiphophorus_maculatus