EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000005757 (Gene tree)
Gene ID: 108271886
Gene Symbol: prpf38a
Alias: fa04h11|fc83e08|wu:fa04h11|wu:fc83e08|zgc:92059
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 10555 bases
Position: chr11:6869379-6879933
Accession: 108271886
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000008457	PRP38	PF03371.15	3.1e-63	1	1
ENSIPUP00000008438	PRP38	PF03371.15	3.8e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000008824	-	879	-	ENSIPUP00000008457	292 (aa)	-	-
ENSIPUT00000008805	-	2418	XM_017479801	ENSIPUP00000008438	311 (aa)	XP_017335290	W5UFD4

Gene Model

Click here to download ENSIPUG00000005757's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000005757's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000005757	prpf38a	75	87.500	ENSG00000134748	PRPF38A	74	87.500	Homo_sapiens
ENSIPUG00000005757	prpf38a	96	91.304	ENSAPOG00000011652	prpf38a	90	81.851	Acanthochromis_polyacanthus
ENSIPUG00000005757	prpf38a	75	87.500	ENSAMEG00000009319	PRPF38A	74	87.500	Ailuropoda_melanoleuca
ENSIPUG00000005757	prpf38a	71	89.640	ENSACIG00000012292	prpf38a	76	89.655	Amphilophus_citrinellus
ENSIPUG00000005757	prpf38a	96	91.304	ENSAOCG00000018004	prpf38a	90	81.851	Amphiprion_ocellaris
ENSIPUG00000005757	prpf38a	96	91.304	ENSAPEG00000021414	prpf38a	90	81.851	Amphiprion_percula
ENSIPUG00000005757	prpf38a	71	90.090	ENSATEG00000004608	prpf38a	90	78.246	Anabas_testudineus
ENSIPUG00000005757	prpf38a	54	82.635	ENSAPLG00000005827	PRPF38A	67	83.234	Anas_platyrhynchos
ENSIPUG00000005757	prpf38a	75	85.776	ENSACAG00000008249	PRPF38A	74	86.207	Anolis_carolinensis
ENSIPUG00000005757	prpf38a	100	54.603	ENSANAG00000029204	-	84	48.496	Aotus_nancymaae
ENSIPUG00000005757	prpf38a	75	87.500	ENSANAG00000027839	PRPF38A	74	87.500	Aotus_nancymaae
ENSIPUG00000005757	prpf38a	71	90.090	ENSACLG00000021595	prpf38a	90	78.445	Astatotilapia_calliptera
ENSIPUG00000005757	prpf38a	100	94.212	ENSAMXG00000029274	prpf38a	90	83.039	Astyanax_mexicanus
ENSIPUG00000005757	prpf38a	82	83.784	ENSBTAG00000002720	PRPF38A	78	87.500	Bos_taurus
ENSIPUG00000005757	prpf38a	67	64.103	WBGene00008380	prp-38	59	65.957	Caenorhabditis_elegans
ENSIPUG00000005757	prpf38a	82	83.398	ENSCJAG00000021594	PRPF38A	77	87.500	Callithrix_jacchus
ENSIPUG00000005757	prpf38a	75	87.500	ENSCAFG00000003740	PRPF38A	74	87.500	Canis_familiaris
ENSIPUG00000005757	prpf38a	75	87.500	ENSCAFG00020010939	PRPF38A	74	87.500	Canis_lupus_dingo
ENSIPUG00000005757	prpf38a	75	87.500	ENSCHIG00000024730	PRPF38A	74	87.500	Capra_hircus
ENSIPUG00000005757	prpf38a	75	87.500	ENSTSYG00000009868	-	74	87.500	Carlito_syrichta
ENSIPUG00000005757	prpf38a	61	84.127	ENSTSYG00000031994	-	67	84.127	Carlito_syrichta
ENSIPUG00000005757	prpf38a	100	81.029	ENSCPOG00000005079	PRPF38A	75	87.500	Cavia_porcellus
ENSIPUG00000005757	prpf38a	75	87.500	ENSCCAG00000026502	PRPF38A	74	87.500	Cebus_capucinus
ENSIPUG00000005757	prpf38a	94	52.721	ENSCATG00000044190	-	69	52.155	Cercocebus_atys
ENSIPUG00000005757	prpf38a	75	87.500	ENSCATG00000032296	PRPF38A	74	87.500	Cercocebus_atys
ENSIPUG00000005757	prpf38a	75	87.500	ENSCLAG00000005816	PRPF38A	74	87.500	Chinchilla_lanigera
ENSIPUG00000005757	prpf38a	75	86.638	ENSCPBG00000014791	PRPF38A	74	86.638	Chrysemys_picta_bellii
ENSIPUG00000005757	prpf38a	95	57.770	ENSCSAVG00000009580	-	74	68.103	Ciona_savignyi
ENSIPUG00000005757	prpf38a	75	87.500	ENSCANG00000032608	PRPF38A	77	87.500	Colobus_angolensis_palliatus
ENSIPUG00000005757	prpf38a	75	73.276	ENSCGRG00001002557	-	77	73.799	Cricetulus_griseus_chok1gshd
ENSIPUG00000005757	prpf38a	75	87.500	ENSCGRG00001018502	-	74	87.500	Cricetulus_griseus_chok1gshd
ENSIPUG00000005757	prpf38a	75	87.500	ENSCGRG00000014868	Prpf38a	74	87.500	Cricetulus_griseus_crigri
ENSIPUG00000005757	prpf38a	71	88.739	ENSCSEG00000001269	prpf38a	79	88.793	Cynoglossus_semilaevis
ENSIPUG00000005757	prpf38a	71	91.892	ENSCVAG00000012305	prpf38a	90	83.513	Cyprinodon_variegatus
ENSIPUG00000005757	prpf38a	100	92.926	ENSDARG00000039213	prpf38a	90	81.625	Danio_rerio
ENSIPUG00000005757	prpf38a	75	87.500	ENSDNOG00000042326	PRPF38A	75	87.500	Dasypus_novemcinctus
ENSIPUG00000005757	prpf38a	85	96.875	ENSDORG00000023857	-	95	96.875	Dipodomys_ordii
ENSIPUG00000005757	prpf38a	93	71.379	ENSDORG00000023691	-	78	80.263	Dipodomys_ordii
ENSIPUG00000005757	prpf38a	93	71.379	ENSDORG00000025371	-	78	80.263	Dipodomys_ordii
ENSIPUG00000005757	prpf38a	69	71.642	FBgn0050342	Prp38	57	74.074	Drosophila_melanogaster
ENSIPUG00000005757	prpf38a	77	82.845	ENSEBUG00000012588	prpf38a	96	69.103	Eptatretus_burgeri
ENSIPUG00000005757	prpf38a	75	87.500	ENSEASG00005014427	PRPF38A	74	87.500	Equus_asinus_asinus
ENSIPUG00000005757	prpf38a	75	87.500	ENSECAG00000022628	PRPF38A	74	87.500	Equus_caballus
ENSIPUG00000005757	prpf38a	71	93.694	ENSELUG00000021094	prpf38a	95	81.720	Esox_lucius
ENSIPUG00000005757	prpf38a	75	87.500	ENSFCAG00000002518	PRPF38A	74	87.500	Felis_catus
ENSIPUG00000005757	prpf38a	100	72.524	ENSFALG00000003612	-	77	80.603	Ficedula_albicollis
ENSIPUG00000005757	prpf38a	61	83.770	ENSFALG00000005598	-	82	72.000	Ficedula_albicollis
ENSIPUG00000005757	prpf38a	100	80.707	ENSFDAG00000011287	PRPF38A	75	87.500	Fukomys_damarensis
ENSIPUG00000005757	prpf38a	70	92.202	ENSFHEG00000014317	prpf38a	95	80.212	Fundulus_heteroclitus
ENSIPUG00000005757	prpf38a	57	97.590	ENSGMOG00000011384	prpf38a	54	97.590	Gadus_morhua
ENSIPUG00000005757	prpf38a	75	87.069	ENSGALG00000010627	PRPF38A	74	87.069	Gallus_gallus
ENSIPUG00000005757	prpf38a	71	91.892	ENSGAFG00000012422	prpf38a	90	80.556	Gambusia_affinis
ENSIPUG00000005757	prpf38a	71	87.946	ENSGACG00000005423	prpf38a	90	77.778	Gasterosteus_aculeatus
ENSIPUG00000005757	prpf38a	75	87.069	ENSGAGG00000020547	PRPF38A	74	87.069	Gopherus_agassizii
ENSIPUG00000005757	prpf38a	75	87.500	ENSGGOG00000003940	PRPF38A	74	87.500	Gorilla_gorilla
ENSIPUG00000005757	prpf38a	65	94.180	ENSHBUG00000020572	prpf38a	80	94.180	Haplochromis_burtoni
ENSIPUG00000005757	prpf38a	100	71.565	ENSHGLG00000007918	-	75	76.623	Heterocephalus_glaber_female
ENSIPUG00000005757	prpf38a	75	87.500	ENSHGLG00000000475	PRPF38A	74	87.500	Heterocephalus_glaber_female
ENSIPUG00000005757	prpf38a	75	87.500	ENSHGLG00100008935	PRPF38A	74	87.500	Heterocephalus_glaber_male
ENSIPUG00000005757	prpf38a	100	71.565	ENSHGLG00100003928	-	75	76.623	Heterocephalus_glaber_male
ENSIPUG00000005757	prpf38a	62	92.308	ENSHCOG00000020781	prpf38a	60	92.593	Hippocampus_comes
ENSIPUG00000005757	prpf38a	75	87.500	ENSSTOG00000015610	PRPF38A	74	87.500	Ictidomys_tridecemlineatus
ENSIPUG00000005757	prpf38a	75	86.638	ENSJJAG00000015811	Prpf38a	74	86.638	Jaculus_jaculus
ENSIPUG00000005757	prpf38a	71	92.342	ENSKMAG00000006588	prpf38a	90	83.513	Kryptolebias_marmoratus
ENSIPUG00000005757	prpf38a	96	84.281	ENSLBEG00000020585	prpf38a	90	78.246	Labrus_bergylta
ENSIPUG00000005757	prpf38a	73	85.841	ENSLACG00000011495	PRPF38A	74	86.207	Latimeria_chalumnae
ENSIPUG00000005757	prpf38a	71	94.595	ENSLOCG00000006262	prpf38a	91	79.167	Lepisosteus_oculatus
ENSIPUG00000005757	prpf38a	75	87.500	ENSLAFG00000025862	PRPF38A	74	87.500	Loxodonta_africana
ENSIPUG00000005757	prpf38a	82	83.398	ENSMFAG00000039449	PRPF38A	77	87.500	Macaca_fascicularis
ENSIPUG00000005757	prpf38a	61	84.817	ENSMMUG00000014333	PRPF38A	69	84.375	Macaca_mulatta
ENSIPUG00000005757	prpf38a	94	52.041	ENSMNEG00000040242	-	68	51.965	Macaca_nemestrina
ENSIPUG00000005757	prpf38a	75	87.500	ENSMNEG00000031221	PRPF38A	74	87.500	Macaca_nemestrina
ENSIPUG00000005757	prpf38a	75	87.500	ENSMLEG00000041105	PRPF38A	74	87.500	Mandrillus_leucophaeus
ENSIPUG00000005757	prpf38a	71	91.892	ENSMAMG00000015431	prpf38a	90	80.212	Mastacembelus_armatus
ENSIPUG00000005757	prpf38a	71	90.090	ENSMZEG00005017838	prpf38a	90	78.445	Maylandia_zebra
ENSIPUG00000005757	prpf38a	75	87.069	ENSMGAG00000011176	PRPF38A	77	87.069	Meleagris_gallopavo
ENSIPUG00000005757	prpf38a	86	82.900	ENSMAUG00000018029	-	87	83.621	Mesocricetus_auratus
ENSIPUG00000005757	prpf38a	75	87.500	ENSMICG00000014193	PRPF38A	74	87.500	Microcebus_murinus
ENSIPUG00000005757	prpf38a	75	87.500	ENSMOCG00000013080	Prpf38a	74	87.500	Microtus_ochrogaster
ENSIPUG00000005757	prpf38a	82	85.547	ENSMMOG00000016972	prpf38a	81	91.379	Mola_mola
ENSIPUG00000005757	prpf38a	75	87.500	ENSMODG00000000644	PRPF38A	74	87.500	Monodelphis_domestica
ENSIPUG00000005757	prpf38a	71	91.441	ENSMALG00000019363	prpf38a	88	79.298	Monopterus_albus
ENSIPUG00000005757	prpf38a	75	87.069	MGP_CAROLIEiJ_G0026269	Prpf38a	74	87.069	Mus_caroli
ENSIPUG00000005757	prpf38a	75	87.069	ENSMUSG00000063800	Prpf38a	74	87.069	Mus_musculus
ENSIPUG00000005757	prpf38a	75	87.069	MGP_PahariEiJ_G0028602	Prpf38a	74	87.069	Mus_pahari
ENSIPUG00000005757	prpf38a	75	87.069	MGP_SPRETEiJ_G0027238	Prpf38a	93	92.063	Mus_spretus
ENSIPUG00000005757	prpf38a	75	87.500	ENSMPUG00000006896	PRPF38A	74	87.500	Mustela_putorius_furo
ENSIPUG00000005757	prpf38a	100	81.350	ENSNGAG00000011884	Prpf38a	75	87.500	Nannospalax_galili
ENSIPUG00000005757	prpf38a	71	88.739	ENSNBRG00000004013	prpf38a	74	88.793	Neolamprologus_brichardi
ENSIPUG00000005757	prpf38a	98	60.784	ENSNLEG00000012592	-	97	57.191	Nomascus_leucogenys
ENSIPUG00000005757	prpf38a	67	86.603	ENSNLEG00000017999	PRPF38A	67	86.603	Nomascus_leucogenys
ENSIPUG00000005757	prpf38a	94	53.741	ENSNLEG00000033398	-	64	50.862	Nomascus_leucogenys
ENSIPUG00000005757	prpf38a	75	83.621	ENSMEUG00000003860	PRPF38A	74	83.621	Notamacropus_eugenii
ENSIPUG00000005757	prpf38a	74	87.773	ENSOPRG00000008985	PRPF38A	96	87.500	Ochotona_princeps
ENSIPUG00000005757	prpf38a	75	87.500	ENSODEG00000005869	PRPF38A	74	87.500	Octodon_degus
ENSIPUG00000005757	prpf38a	71	90.090	ENSONIG00000007816	prpf38a	90	78.445	Oreochromis_niloticus
ENSIPUG00000005757	prpf38a	100	48.562	ENSOANG00000009541	-	96	49.169	Ornithorhynchus_anatinus
ENSIPUG00000005757	prpf38a	75	87.500	ENSOCUG00000000963	PRPF38A	74	87.500	Oryctolagus_cuniculus
ENSIPUG00000005757	prpf38a	96	84.950	ENSORLG00000013485	prpf38a	94	82.079	Oryzias_latipes
ENSIPUG00000005757	prpf38a	96	84.950	ENSORLG00020002130	prpf38a	94	82.079	Oryzias_latipes_hni
ENSIPUG00000005757	prpf38a	96	84.615	ENSORLG00015021393	prpf38a	95	78.596	Oryzias_latipes_hsok
ENSIPUG00000005757	prpf38a	96	83.946	ENSOMEG00000016333	prpf38a	90	78.947	Oryzias_melastigma
ENSIPUG00000005757	prpf38a	75	87.500	ENSOGAG00000005423	PRPF38A	74	87.500	Otolemur_garnettii
ENSIPUG00000005757	prpf38a	75	87.500	ENSOARG00000005373	PRPF38A	74	87.500	Ovis_aries
ENSIPUG00000005757	prpf38a	75	87.500	ENSPPAG00000030905	PRPF38A	74	87.500	Pan_paniscus
ENSIPUG00000005757	prpf38a	94	67.905	ENSPPAG00000033867	-	71	68.996	Pan_paniscus
ENSIPUG00000005757	prpf38a	75	87.500	ENSPPRG00000013268	PRPF38A	74	87.500	Panthera_pardus
ENSIPUG00000005757	prpf38a	75	87.500	ENSPTIG00000015419	PRPF38A	74	87.500	Panthera_tigris_altaica
ENSIPUG00000005757	prpf38a	82	83.398	ENSPTRG00000000739	PRPF38A	77	87.500	Pan_troglodytes
ENSIPUG00000005757	prpf38a	75	87.500	ENSPANG00000015483	PRPF38A	74	87.500	Papio_anubis
ENSIPUG00000005757	prpf38a	71	92.342	ENSPKIG00000011439	prpf38a	91	79.298	Paramormyrops_kingsleyae
ENSIPUG00000005757	prpf38a	75	84.914	ENSPSIG00000017487	PRPF38A	74	85.345	Pelodiscus_sinensis
ENSIPUG00000005757	prpf38a	64	93.085	ENSPMGG00000021352	prpf38a	79	88.793	Periophthalmus_magnuspinnatus
ENSIPUG00000005757	prpf38a	100	77.707	ENSPEMG00000011212	-	86	73.897	Peromyscus_maniculatus_bairdii
ENSIPUG00000005757	prpf38a	75	87.500	ENSPEMG00000023277	-	74	87.500	Peromyscus_maniculatus_bairdii
ENSIPUG00000005757	prpf38a	75	87.069	ENSPCIG00000022369	-	74	87.069	Phascolarctos_cinereus
ENSIPUG00000005757	prpf38a	96	83.444	ENSPFOG00000004248	prpf38a	90	80.556	Poecilia_formosa
ENSIPUG00000005757	prpf38a	97	78.033	ENSPLAG00000010328	prpf38a	90	80.556	Poecilia_latipinna
ENSIPUG00000005757	prpf38a	93	80.756	ENSPMEG00000011804	prpf38a	90	80.556	Poecilia_mexicana
ENSIPUG00000005757	prpf38a	95	78.738	ENSPREG00000002835	prpf38a	58	96.296	Poecilia_reticulata
ENSIPUG00000005757	prpf38a	75	76.371	ENSPPYG00000001348	PRPF38A	74	76.793	Pongo_abelii
ENSIPUG00000005757	prpf38a	75	87.069	ENSPCAG00000013328	PRPF38A	74	87.069	Procavia_capensis
ENSIPUG00000005757	prpf38a	75	87.500	ENSPCOG00000016387	-	74	87.500	Propithecus_coquereli
ENSIPUG00000005757	prpf38a	91	69.149	ENSPCOG00000020709	-	76	70.690	Propithecus_coquereli
ENSIPUG00000005757	prpf38a	75	87.500	ENSPVAG00000009803	PRPF38A	74	87.500	Pteropus_vampyrus
ENSIPUG00000005757	prpf38a	71	90.090	ENSPNYG00000005571	prpf38a	90	78.445	Pundamilia_nyererei
ENSIPUG00000005757	prpf38a	100	93.248	ENSPNAG00000010399	prpf38a	90	81.979	Pygocentrus_nattereri
ENSIPUG00000005757	prpf38a	75	87.931	ENSRNOG00000009451	Prpf38a	74	87.931	Rattus_norvegicus
ENSIPUG00000005757	prpf38a	75	87.500	ENSRBIG00000036442	PRPF38A	77	87.500	Rhinopithecus_bieti
ENSIPUG00000005757	prpf38a	99	54.341	ENSRBIG00000034053	-	67	73.770	Rhinopithecus_bieti
ENSIPUG00000005757	prpf38a	75	87.500	ENSRROG00000032788	PRPF38A	74	87.500	Rhinopithecus_roxellana
ENSIPUG00000005757	prpf38a	99	69.256	ENSRROG00000040003	-	76	71.121	Rhinopithecus_roxellana
ENSIPUG00000005757	prpf38a	99	55.305	ENSRROG00000034606	-	67	50.655	Rhinopithecus_roxellana
ENSIPUG00000005757	prpf38a	75	87.500	ENSSBOG00000019515	PRPF38A	74	87.500	Saimiri_boliviensis_boliviensis
ENSIPUG00000005757	prpf38a	86	78.067	ENSSHAG00000006906	-	95	78.599	Sarcophilus_harrisii
ENSIPUG00000005757	prpf38a	77	72.840	ENSSHAG00000006029	-	74	74.222	Sarcophilus_harrisii
ENSIPUG00000005757	prpf38a	71	91.892	ENSSFOG00015013572	prpf38a	91	78.819	Scleropages_formosus
ENSIPUG00000005757	prpf38a	71	91.892	ENSSMAG00000015379	prpf38a	91	79.298	Scophthalmus_maximus
ENSIPUG00000005757	prpf38a	71	94.144	ENSSDUG00000001324	prpf38a	90	80.702	Seriola_dumerili
ENSIPUG00000005757	prpf38a	71	94.144	ENSSLDG00000014803	prpf38a	90	80.702	Seriola_lalandi_dorsalis
ENSIPUG00000005757	prpf38a	75	64.655	ENSSARG00000014458	PRPF38A	74	65.086	Sorex_araneus
ENSIPUG00000005757	prpf38a	75	84.483	ENSSPUG00000013259	PRPF38A	84	76.336	Sphenodon_punctatus
ENSIPUG00000005757	prpf38a	71	72.973	ENSSPAG00000010449	prpf38a	72	73.707	Stegastes_partitus
ENSIPUG00000005757	prpf38a	75	87.500	ENSSSCG00000028288	PRPF38A	74	87.500	Sus_scrofa
ENSIPUG00000005757	prpf38a	75	81.466	ENSTGUG00000008995	PRPF38A	84	71.805	Taeniopygia_guttata
ENSIPUG00000005757	prpf38a	71	91.441	ENSTRUG00000003374	prpf38a	71	91.379	Takifugu_rubripes
ENSIPUG00000005757	prpf38a	71	88.839	ENSTNIG00000005533	prpf38a	90	77.352	Tetraodon_nigroviridis
ENSIPUG00000005757	prpf38a	75	87.500	ENSTBEG00000000725	PRPF38A	74	87.500	Tupaia_belangeri
ENSIPUG00000005757	prpf38a	75	87.500	ENSTTRG00000016139	PRPF38A	74	87.500	Tursiops_truncatus
ENSIPUG00000005757	prpf38a	75	87.500	ENSUAMG00000000625	PRPF38A	74	87.500	Ursus_americanus
ENSIPUG00000005757	prpf38a	75	87.500	ENSUMAG00000022674	PRPF38A	74	87.500	Ursus_maritimus
ENSIPUG00000005757	prpf38a	75	87.069	ENSVPAG00000000907	PRPF38A	74	87.069	Vicugna_pacos
ENSIPUG00000005757	prpf38a	75	87.500	ENSVVUG00000004475	PRPF38A	74	87.500	Vulpes_vulpes
ENSIPUG00000005757	prpf38a	71	86.036	ENSXETG00000008060	prpf38a	74	86.638	Xenopus_tropicalis
ENSIPUG00000005757	prpf38a	71	89.732	ENSXCOG00000007393	prpf38a	77	89.744	Xiphophorus_couchianus
ENSIPUG00000005757	prpf38a	71	90.991	ENSXMAG00000026143	prpf38a	90	80.556	Xiphophorus_maculatus