EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000005808 (Gene tree)
Gene ID: -
Gene Symbol: oscp1a
Alias: oscp1|zgc:171454
Full Name: organic solute carrier partner 1a
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 1577 bases
Position: chr14:3114276-3115852
Accession: ZDB-GENE-080204-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000008452	LSM	PF01423.22	4.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000008819	-	348	-	ENSIPUP00000008452	115 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000005808's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000005808's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000005808	oscp1a	91	66.667	ENSG00000181817	LSM10	85	66.667	Homo_sapiens
ENSIPUG00000005808	oscp1a	97	64.286	ENSAMEG00000019854	LSM10	91	64.286	Ailuropoda_melanoleuca
ENSIPUG00000005808	oscp1a	90	72.816	ENSACIG00000015420	oscp1a	68	72.816	Amphilophus_citrinellus
ENSIPUG00000005808	oscp1a	94	72.222	ENSAOCG00000015618	LSM10	89	72.222	Amphiprion_ocellaris
ENSIPUG00000005808	oscp1a	94	72.222	ENSAOCG00000014654	-	89	72.222	Amphiprion_ocellaris
ENSIPUG00000005808	oscp1a	92	75.472	ENSAOCG00000015607	LSM10	81	75.472	Amphiprion_ocellaris
ENSIPUG00000005808	oscp1a	94	72.222	ENSAPEG00000021845	-	89	72.222	Amphiprion_percula
ENSIPUG00000005808	oscp1a	92	75.472	ENSAPEG00000021851	LSM10	81	75.472	Amphiprion_percula
ENSIPUG00000005808	oscp1a	90	72.115	ENSATEG00000006310	oscp1a	77	72.115	Anabas_testudineus
ENSIPUG00000005808	oscp1a	91	63.810	ENSACAG00000001231	LSM10	85	63.810	Anolis_carolinensis
ENSIPUG00000005808	oscp1a	91	66.667	ENSANAG00000018759	-	85	66.667	Aotus_nancymaae
ENSIPUG00000005808	oscp1a	91	65.714	ENSANAG00000031489	-	86	65.714	Aotus_nancymaae
ENSIPUG00000005808	oscp1a	94	71.296	ENSACLG00000004728	oscp1a	88	71.296	Astatotilapia_calliptera
ENSIPUG00000005808	oscp1a	99	80.702	ENSAMXG00000025301	oscp1a	95	80.702	Astyanax_mexicanus
ENSIPUG00000005808	oscp1a	92	67.925	ENSBTAG00000024096	LSM10	87	67.925	Bos_taurus
ENSIPUG00000005808	oscp1a	91	66.667	ENSCJAG00000044880	LSM10	85	66.667	Callithrix_jacchus
ENSIPUG00000005808	oscp1a	92	68.868	ENSCAFG00000003382	LSM10	86	68.868	Canis_familiaris
ENSIPUG00000005808	oscp1a	92	68.868	ENSCAFG00020008920	LSM10	86	68.868	Canis_lupus_dingo
ENSIPUG00000005808	oscp1a	92	67.925	ENSCHIG00000009398	LSM10	87	67.925	Capra_hircus
ENSIPUG00000005808	oscp1a	92	67.925	ENSCAPG00000012567	LSM10	86	67.925	Cavia_aperea
ENSIPUG00000005808	oscp1a	92	67.925	ENSCPOG00000039302	LSM10	86	67.925	Cavia_porcellus
ENSIPUG00000005808	oscp1a	91	66.667	ENSCCAG00000018913	-	85	66.667	Cebus_capucinus
ENSIPUG00000005808	oscp1a	91	66.667	ENSCCAG00000008378	-	85	66.667	Cebus_capucinus
ENSIPUG00000005808	oscp1a	91	66.667	ENSCATG00000006589	LSM10	85	66.667	Cercocebus_atys
ENSIPUG00000005808	oscp1a	92	67.925	ENSCLAG00000008633	LSM10	86	67.925	Chinchilla_lanigera
ENSIPUG00000005808	oscp1a	91	66.667	ENSCSAG00000000134	LSM10	85	66.667	Chlorocebus_sabaeus
ENSIPUG00000005808	oscp1a	91	66.667	ENSCHOG00000008615	LSM10	84	66.667	Choloepus_hoffmanni
ENSIPUG00000005808	oscp1a	94	32.407	ENSCSAVG00000001896	-	87	32.407	Ciona_savignyi
ENSIPUG00000005808	oscp1a	91	66.667	ENSCANG00000019928	LSM10	85	66.667	Colobus_angolensis_palliatus
ENSIPUG00000005808	oscp1a	91	69.524	ENSCGRG00001004317	-	86	69.524	Cricetulus_griseus_chok1gshd
ENSIPUG00000005808	oscp1a	82	65.625	ENSCGRG00001022673	-	78	65.625	Cricetulus_griseus_chok1gshd
ENSIPUG00000005808	oscp1a	91	69.524	ENSCGRG00000014935	-	86	69.524	Cricetulus_griseus_crigri
ENSIPUG00000005808	oscp1a	82	65.625	ENSCGRG00000015514	-	78	65.625	Cricetulus_griseus_crigri
ENSIPUG00000005808	oscp1a	99	64.035	ENSCSEG00000010374	oscp1a	73	66.972	Cynoglossus_semilaevis
ENSIPUG00000005808	oscp1a	89	73.529	ENSCVAG00000001536	oscp1a	79	73.529	Cyprinodon_variegatus
ENSIPUG00000005808	oscp1a	71	76.829	ENSDARG00000109563	CABZ01074453.1	95	76.829	Danio_rerio
ENSIPUG00000005808	oscp1a	97	73.214	ENSDARG00000101222	oscp1a	93	73.214	Danio_rerio
ENSIPUG00000005808	oscp1a	91	68.571	ENSDNOG00000036662	LSM10	85	68.571	Dasypus_novemcinctus
ENSIPUG00000005808	oscp1a	91	70.476	ENSDORG00000007579	Lsm10	85	70.476	Dipodomys_ordii
ENSIPUG00000005808	oscp1a	91	69.524	ENSETEG00000005703	LSM10	87	69.524	Echinops_telfairi
ENSIPUG00000005808	oscp1a	85	60.204	ENSEBUG00000001312	oscp1a	80	60.204	Eptatretus_burgeri
ENSIPUG00000005808	oscp1a	91	69.524	ENSEASG00005012194	LSM10	85	69.524	Equus_asinus_asinus
ENSIPUG00000005808	oscp1a	91	69.524	ENSECAG00000005071	LSM10	85	69.524	Equus_caballus
ENSIPUG00000005808	oscp1a	91	70.476	ENSEEUG00000012032	LSM10	85	70.476	Erinaceus_europaeus
ENSIPUG00000005808	oscp1a	92	74.528	ENSELUG00000007452	oscp1a	87	74.528	Esox_lucius
ENSIPUG00000005808	oscp1a	91	68.571	ENSFALG00000000851	LSM10	85	68.571	Ficedula_albicollis
ENSIPUG00000005808	oscp1a	92	68.868	ENSFDAG00000021056	LSM10	86	68.868	Fukomys_damarensis
ENSIPUG00000005808	oscp1a	87	76.000	ENSFHEG00000001058	oscp1a	86	76.000	Fundulus_heteroclitus
ENSIPUG00000005808	oscp1a	99	70.175	ENSGMOG00000019832	oscp1a	96	70.175	Gadus_morhua
ENSIPUG00000005808	oscp1a	91	70.476	ENSGALG00000002127	LSM10	85	70.476	Gallus_gallus
ENSIPUG00000005808	oscp1a	83	72.632	ENSGAFG00000016445	oscp1a	77	72.632	Gambusia_affinis
ENSIPUG00000005808	oscp1a	90	75.962	ENSGACG00000002329	oscp1a	85	75.962	Gasterosteus_aculeatus
ENSIPUG00000005808	oscp1a	91	67.619	ENSGAGG00000024848	LSM10	85	67.619	Gopherus_agassizii
ENSIPUG00000005808	oscp1a	91	66.667	ENSGGOG00000003556	LSM10	85	66.667	Gorilla_gorilla
ENSIPUG00000005808	oscp1a	94	72.222	ENSHBUG00000001722	oscp1a	88	72.222	Haplochromis_burtoni
ENSIPUG00000005808	oscp1a	92	65.094	ENSHGLG00000011625	LSM10	86	65.094	Heterocephalus_glaber_female
ENSIPUG00000005808	oscp1a	92	65.094	ENSHGLG00100001769	LSM10	86	65.094	Heterocephalus_glaber_male
ENSIPUG00000005808	oscp1a	92	68.868	ENSSTOG00000000606	LSM10	86	68.868	Ictidomys_tridecemlineatus
ENSIPUG00000005808	oscp1a	94	73.148	ENSKMAG00000012143	oscp1a	89	73.148	Kryptolebias_marmoratus
ENSIPUG00000005808	oscp1a	88	73.267	ENSLBEG00000017764	oscp1a	83	73.267	Labrus_bergylta
ENSIPUG00000005808	oscp1a	90	65.385	ENSLACG00000015904	LSM10	80	65.385	Latimeria_chalumnae
ENSIPUG00000005808	oscp1a	91	72.381	ENSLOCG00000018277	oscp1a	86	72.381	Lepisosteus_oculatus
ENSIPUG00000005808	oscp1a	98	65.487	ENSLAFG00000009600	LSM10	93	65.487	Loxodonta_africana
ENSIPUG00000005808	oscp1a	91	66.667	ENSMFAG00000009115	LSM10	85	66.667	Macaca_fascicularis
ENSIPUG00000005808	oscp1a	91	66.667	ENSMMUG00000017338	LSM10	85	66.667	Macaca_mulatta
ENSIPUG00000005808	oscp1a	91	66.667	ENSMNEG00000020023	LSM10	85	66.667	Macaca_nemestrina
ENSIPUG00000005808	oscp1a	91	66.667	ENSMLEG00000025150	LSM10	85	66.667	Mandrillus_leucophaeus
ENSIPUG00000005808	oscp1a	92	70.755	ENSMAMG00000004427	oscp1a	87	70.755	Mastacembelus_armatus
ENSIPUG00000005808	oscp1a	94	71.296	ENSMZEG00005026307	oscp1a	88	71.296	Maylandia_zebra
ENSIPUG00000005808	oscp1a	91	69.524	ENSMGAG00000015707	LSM10	85	69.524	Meleagris_gallopavo
ENSIPUG00000005808	oscp1a	91	69.524	ENSMAUG00000016624	Lsm10	86	69.524	Mesocricetus_auratus
ENSIPUG00000005808	oscp1a	91	68.571	ENSMOCG00000021943	Lsm10	86	68.571	Microtus_ochrogaster
ENSIPUG00000005808	oscp1a	93	74.545	ENSMMOG00000013597	oscp1a	82	74.545	Mola_mola
ENSIPUG00000005808	oscp1a	92	67.925	ENSMODG00000023328	LSM10	86	67.925	Monodelphis_domestica
ENSIPUG00000005808	oscp1a	60	68.116	ENSMALG00000012661	oscp1a	54	68.116	Monopterus_albus
ENSIPUG00000005808	oscp1a	91	69.524	MGP_CAROLIEiJ_G0026467	Lsm10	97	71.111	Mus_caroli
ENSIPUG00000005808	oscp1a	91	69.524	ENSMUSG00000050188	Lsm10	97	71.111	Mus_musculus
ENSIPUG00000005808	oscp1a	91	69.524	MGP_PahariEiJ_G0028798	Lsm10	97	71.111	Mus_pahari
ENSIPUG00000005808	oscp1a	91	69.524	MGP_SPRETEiJ_G0027446	Lsm10	97	71.111	Mus_spretus
ENSIPUG00000005808	oscp1a	92	68.868	ENSMPUG00000018593	LSM10	86	68.868	Mustela_putorius_furo
ENSIPUG00000005808	oscp1a	97	64.865	ENSMLUG00000023895	LSM10	90	64.865	Myotis_lucifugus
ENSIPUG00000005808	oscp1a	91	68.571	ENSNGAG00000015011	Lsm10	85	68.571	Nannospalax_galili
ENSIPUG00000005808	oscp1a	90	73.077	ENSNBRG00000014306	oscp1a	85	73.077	Neolamprologus_brichardi
ENSIPUG00000005808	oscp1a	91	67.619	ENSNLEG00000033754	LSM10	85	67.619	Nomascus_leucogenys
ENSIPUG00000005808	oscp1a	92	67.925	ENSMEUG00000006313	LSM10	86	67.925	Notamacropus_eugenii
ENSIPUG00000005808	oscp1a	93	65.421	ENSOPRG00000001699	LSM10	87	65.421	Ochotona_princeps
ENSIPUG00000005808	oscp1a	92	67.925	ENSODEG00000019161	LSM10	86	67.925	Octodon_degus
ENSIPUG00000005808	oscp1a	90	73.077	ENSONIG00000020904	oscp1a	85	73.077	Oreochromis_niloticus
ENSIPUG00000005808	oscp1a	92	66.038	ENSOANG00000002066	LSM10	86	66.038	Ornithorhynchus_anatinus
ENSIPUG00000005808	oscp1a	92	65.094	ENSOCUG00000005333	LSM10	86	65.094	Oryctolagus_cuniculus
ENSIPUG00000005808	oscp1a	92	70.755	ENSORLG00000009504	oscp1a	88	70.755	Oryzias_latipes
ENSIPUG00000005808	oscp1a	92	70.755	ENSORLG00020016201	oscp1a	88	70.755	Oryzias_latipes_hni
ENSIPUG00000005808	oscp1a	92	69.811	ENSORLG00015007794	oscp1a	89	69.811	Oryzias_latipes_hsok
ENSIPUG00000005808	oscp1a	97	66.071	ENSOGAG00000002653	LSM10	91	66.071	Otolemur_garnettii
ENSIPUG00000005808	oscp1a	92	67.925	ENSOARG00000009596	LSM10	87	67.925	Ovis_aries
ENSIPUG00000005808	oscp1a	91	66.667	ENSPPAG00000023465	LSM10	85	66.667	Pan_paniscus
ENSIPUG00000005808	oscp1a	91	69.524	ENSPPRG00000014619	LSM10	85	69.524	Panthera_pardus
ENSIPUG00000005808	oscp1a	91	69.524	ENSPTIG00000004613	LSM10	85	69.524	Panthera_tigris_altaica
ENSIPUG00000005808	oscp1a	91	66.667	ENSPTRG00000000539	LSM10	85	66.667	Pan_troglodytes
ENSIPUG00000005808	oscp1a	91	66.667	ENSPANG00000023172	LSM10	85	66.667	Papio_anubis
ENSIPUG00000005808	oscp1a	92	76.415	ENSPKIG00000003728	oscp1a	85	76.415	Paramormyrops_kingsleyae
ENSIPUG00000005808	oscp1a	91	66.667	ENSPSIG00000000590	LSM10	85	66.667	Pelodiscus_sinensis
ENSIPUG00000005808	oscp1a	65	69.333	ENSPMGG00000015718	oscp1a	97	69.333	Periophthalmus_magnuspinnatus
ENSIPUG00000005808	oscp1a	87	69.000	ENSPCIG00000014865	LSM10	74	69.000	Phascolarctos_cinereus
ENSIPUG00000005808	oscp1a	93	71.028	ENSPFOG00000020490	oscp1a	91	71.028	Poecilia_formosa
ENSIPUG00000005808	oscp1a	93	71.028	ENSPLAG00000016537	oscp1a	82	71.028	Poecilia_latipinna
ENSIPUG00000005808	oscp1a	89	71.569	ENSPMEG00000000174	oscp1a	89	71.569	Poecilia_mexicana
ENSIPUG00000005808	oscp1a	93	71.028	ENSPREG00000009899	oscp1a	82	71.028	Poecilia_reticulata
ENSIPUG00000005808	oscp1a	91	66.667	ENSPPYG00000001539	LSM10	85	66.667	Pongo_abelii
ENSIPUG00000005808	oscp1a	91	68.571	ENSPCAG00000002520	LSM10	88	68.571	Procavia_capensis
ENSIPUG00000005808	oscp1a	92	67.925	ENSPVAG00000008644	LSM10	86	67.925	Pteropus_vampyrus
ENSIPUG00000005808	oscp1a	94	72.222	ENSPNYG00000003138	oscp1a	88	72.222	Pundamilia_nyererei
ENSIPUG00000005808	oscp1a	99	77.193	ENSPNAG00000028829	oscp1a	95	77.193	Pygocentrus_nattereri
ENSIPUG00000005808	oscp1a	91	68.571	ENSRNOG00000025716	Lsm10	86	68.571	Rattus_norvegicus
ENSIPUG00000005808	oscp1a	91	66.667	ENSRBIG00000001561	LSM10	85	66.667	Rhinopithecus_bieti
ENSIPUG00000005808	oscp1a	91	66.667	ENSRROG00000011414	LSM10	85	66.667	Rhinopithecus_roxellana
ENSIPUG00000005808	oscp1a	91	66.667	ENSSBOG00000036413	-	85	66.667	Saimiri_boliviensis_boliviensis
ENSIPUG00000005808	oscp1a	92	67.925	ENSSHAG00000018056	LSM10	86	67.925	Sarcophilus_harrisii
ENSIPUG00000005808	oscp1a	92	71.698	ENSSFOG00015019954	lsm10	87	71.698	Scleropages_formosus
ENSIPUG00000005808	oscp1a	90	75.000	ENSSMAG00000001297	oscp1a	89	75.000	Scophthalmus_maximus
ENSIPUG00000005808	oscp1a	90	71.845	ENSSDUG00000007090	oscp1a	84	71.845	Seriola_dumerili
ENSIPUG00000005808	oscp1a	93	69.159	ENSSLDG00000000800	oscp1a	88	69.159	Seriola_lalandi_dorsalis
ENSIPUG00000005808	oscp1a	90	69.231	ENSSARG00000004211	LSM10	84	69.524	Sorex_araneus
ENSIPUG00000005808	oscp1a	94	73.148	ENSSPAG00000009229	oscp1a	89	73.148	Stegastes_partitus
ENSIPUG00000005808	oscp1a	98	64.602	ENSSSCG00000038916	LSM10	93	64.602	Sus_scrofa
ENSIPUG00000005808	oscp1a	91	70.476	ENSTGUG00000001602	-	86	70.476	Taeniopygia_guttata
ENSIPUG00000005808	oscp1a	91	69.524	ENSTGUG00000001600	-	86	69.524	Taeniopygia_guttata
ENSIPUG00000005808	oscp1a	90	73.786	ENSTRUG00000010531	oscp1a	83	73.786	Takifugu_rubripes
ENSIPUG00000005808	oscp1a	91	67.619	ENSTBEG00000016674	LSM10	85	67.619	Tupaia_belangeri
ENSIPUG00000005808	oscp1a	92	67.925	ENSUAMG00000020265	LSM10	86	67.925	Ursus_americanus
ENSIPUG00000005808	oscp1a	92	68.868	ENSVVUG00000023209	LSM10	86	68.868	Vulpes_vulpes
ENSIPUG00000005808	oscp1a	91	66.667	ENSXETG00000027631	lsm10	87	66.667	Xenopus_tropicalis
ENSIPUG00000005808	oscp1a	93	71.028	ENSXCOG00000018776	oscp1a	67	71.028	Xiphophorus_couchianus
ENSIPUG00000005808	oscp1a	87	74.000	ENSXMAG00000019963	oscp1a	80	74.000	Xiphophorus_maculatus