EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000005919 (Gene tree)
Gene ID: 108258046
Gene Symbol: papola
Alias: papolb|si:ch211-199l3.6|wu:fc43b06|wu:fp01g10|zgc:109706
Full Name: poly(A) polymerase alpha
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 25027 bases
Position: chr25:5777911-5802937
Accession: 108258046
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000008720	PAP_RNA-bind	PF04926.15	1.9e-24	1	1
ENSIPUP00000008700	PAP_RNA-bind	PF04926.15	2e-24	1	1
ENSIPUP00000008779	PAP_RNA-bind	PF04926.15	2.6e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000009100	-	6722	XM_017456304	ENSIPUP00000008720	782 (aa)	XP_017311793	A0A2D0PZ78
ENSIPUT00000009079	-	6850	XM_017456302	ENSIPUP00000008700	791 (aa)	XP_017311791	A0A2D0Q277
ENSIPUT00000009159	-	2205	-	ENSIPUP00000008779	734 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000005919's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000005919's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000005919	papola	99	56.943	ENSIPUG00000021642	papolg	99	56.944

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000005919	papola	100	67.254	ENSG00000090060	PAPOLA	94	94.211	Homo_sapiens
ENSIPUG00000005919	papola	99	67.215	ENSAMEG00000014142	PAPOLA	99	68.159	Ailuropoda_melanoleuca
ENSIPUG00000005919	papola	99	65.617	ENSAPLG00000006645	PAPOLA	99	66.497	Anas_platyrhynchos
ENSIPUG00000005919	papola	98	67.054	ENSACAG00000013474	PAPOLA	99	70.255	Anolis_carolinensis
ENSIPUG00000005919	papola	72	78.908	ENSANAG00000027941	-	98	79.588	Aotus_nancymaae
ENSIPUG00000005919	papola	100	67.128	ENSANAG00000018274	PAPOLA	99	83.948	Aotus_nancymaae
ENSIPUG00000005919	papola	100	85.072	ENSAMXG00000018141	papola	99	90.000	Astyanax_mexicanus
ENSIPUG00000005919	papola	100	67.389	ENSBTAG00000004054	PAPOLA	100	68.401	Bos_taurus
ENSIPUG00000005919	papola	90	84.375	ENSCJAG00000006512	PAPOLA	99	83.948	Callithrix_jacchus
ENSIPUG00000005919	papola	100	66.584	ENSCAFG00000017783	PAPOLA	100	67.758	Canis_familiaris
ENSIPUG00000005919	papola	95	80.936	ENSCAFG00020011550	PAPOLA	97	84.066	Canis_lupus_dingo
ENSIPUG00000005919	papola	100	67.462	ENSCHIG00000025004	-	98	74.961	Capra_hircus
ENSIPUG00000005919	papola	99	67.263	ENSTSYG00000012384	PAPOLA	99	67.636	Carlito_syrichta
ENSIPUG00000005919	papola	100	64.304	ENSCPOG00000002648	PAPOLA	100	64.810	Cavia_porcellus
ENSIPUG00000005919	papola	91	85.199	ENSCCAG00000025120	PAPOLA	97	84.730	Cebus_capucinus
ENSIPUG00000005919	papola	100	67.128	ENSCATG00000018815	PAPOLA	99	84.730	Cercocebus_atys
ENSIPUG00000005919	papola	100	68.182	ENSCLAG00000016342	PAPOLA	100	67.970	Chinchilla_lanigera
ENSIPUG00000005919	papola	100	67.038	ENSCSAG00000010516	PAPOLA	100	68.045	Chlorocebus_sabaeus
ENSIPUG00000005919	papola	74	65.455	ENSCHOG00000001115	PAPOLA	72	65.455	Choloepus_hoffmanni
ENSIPUG00000005919	papola	72	85.499	ENSCPBG00000024125	PAPOLA	100	67.934	Chrysemys_picta_bellii
ENSIPUG00000005919	papola	99	62.500	ENSCANG00000000159	PAPOLA	100	63.442	Colobus_angolensis_palliatus
ENSIPUG00000005919	papola	100	68.274	ENSCGRG00001022693	-	100	68.655	Cricetulus_griseus_chok1gshd
ENSIPUG00000005919	papola	99	59.898	ENSCGRG00001002732	-	99	59.898	Cricetulus_griseus_chok1gshd
ENSIPUG00000005919	papola	100	63.452	ENSCGRG00001000229	-	93	73.862	Cricetulus_griseus_chok1gshd
ENSIPUG00000005919	papola	100	67.975	ENSCGRG00000003664	-	100	68.354	Cricetulus_griseus_crigri
ENSIPUG00000005919	papola	100	59.108	ENSCGRG00000000257	-	100	59.108	Cricetulus_griseus_crigri
ENSIPUG00000005919	papola	98	58.581	ENSCGRG00000001888	-	96	58.839	Cricetulus_griseus_crigri
ENSIPUG00000005919	papola	80	45.397	ENSCSEG00000001841	-	92	45.397	Cynoglossus_semilaevis
ENSIPUG00000005919	papola	100	68.774	ENSDARG00000009585	papola	100	68.774	Danio_rerio
ENSIPUG00000005919	papola	68	56.215	ENSDORG00000013415	-	100	57.143	Dipodomys_ordii
ENSIPUG00000005919	papola	99	59.898	ENSETEG00000004889	PAPOLA	100	60.051	Echinops_telfairi
ENSIPUG00000005919	papola	100	69.231	ENSELUG00000018972	papola	100	69.231	Esox_lucius
ENSIPUG00000005919	papola	100	67.771	ENSFCAG00000006784	PAPOLA	100	68.153	Felis_catus
ENSIPUG00000005919	papola	99	64.684	ENSFALG00000002547	PAPOLA	98	65.012	Ficedula_albicollis
ENSIPUG00000005919	papola	93	82.540	ENSFDAG00000010370	PAPOLA	99	68.462	Fukomys_damarensis
ENSIPUG00000005919	papola	66	87.427	ENSGMOG00000010209	papola	100	86.040	Gadus_morhua
ENSIPUG00000005919	papola	100	66.836	ENSGALG00000033099	PAPOLA	100	67.430	Gallus_gallus
ENSIPUG00000005919	papola	65	53.306	ENSGACG00000006142	-	100	53.542	Gasterosteus_aculeatus
ENSIPUG00000005919	papola	72	85.499	ENSGAGG00000020500	PAPOLA	99	70.663	Gopherus_agassizii
ENSIPUG00000005919	papola	100	67.254	ENSGGOG00000006287	PAPOLA	99	77.106	Gorilla_gorilla
ENSIPUG00000005919	papola	99	60.925	ENSHGLG00000017457	-	97	66.504	Heterocephalus_glaber_female
ENSIPUG00000005919	papola	84	79.947	ENSHGLG00000007467	-	83	75.743	Heterocephalus_glaber_female
ENSIPUG00000005919	papola	97	80.101	ENSHGLG00000007909	-	100	68.020	Heterocephalus_glaber_female
ENSIPUG00000005919	papola	97	79.933	ENSHGLG00100017273	PAPOLA	100	67.893	Heterocephalus_glaber_male
ENSIPUG00000005919	papola	100	67.261	ENSSTOG00000011471	PAPOLA	100	68.020	Ictidomys_tridecemlineatus
ENSIPUG00000005919	papola	99	67.344	ENSJJAG00000024340	Papola	99	68.077	Jaculus_jaculus
ENSIPUG00000005919	papola	99	62.767	ENSLACG00000018136	PAPOLA	99	62.767	Latimeria_chalumnae
ENSIPUG00000005919	papola	99	65.889	ENSLOCG00000008632	papola	99	62.738	Lepisosteus_oculatus
ENSIPUG00000005919	papola	99	67.174	ENSLAFG00000000946	PAPOLA	99	68.333	Loxodonta_africana
ENSIPUG00000005919	papola	100	67.128	ENSMFAG00000001792	PAPOLA	99	84.104	Macaca_fascicularis
ENSIPUG00000005919	papola	100	67.038	ENSMMUG00000018610	PAPOLA	100	68.045	Macaca_mulatta
ENSIPUG00000005919	papola	100	67.128	ENSMNEG00000043747	PAPOLA	98	84.888	Macaca_nemestrina
ENSIPUG00000005919	papola	100	67.128	ENSMLEG00000032066	PAPOLA	100	68.045	Mandrillus_leucophaeus
ENSIPUG00000005919	papola	85	65.522	ENSMGAG00000013228	-	100	66.218	Meleagris_gallopavo
ENSIPUG00000005919	papola	100	67.893	ENSMAUG00000017178	Papola	100	68.274	Mesocricetus_auratus
ENSIPUG00000005919	papola	100	66.373	ENSMICG00000010347	PAPOLA	98	84.815	Microcebus_murinus
ENSIPUG00000005919	papola	100	68.274	ENSMOCG00000021670	Papola	100	68.528	Microtus_ochrogaster
ENSIPUG00000005919	papola	100	66.541	ENSMODG00000012887	-	100	67.557	Monodelphis_domestica
ENSIPUG00000005919	papola	99	59.642	ENSMODG00000001969	-	99	59.618	Monodelphis_domestica
ENSIPUG00000005919	papola	100	68.147	MGP_CAROLIEiJ_G0018093	Papola	100	68.568	Mus_caroli
ENSIPUG00000005919	papola	100	68.274	ENSMUSG00000021111	Papola	100	68.441	Mus_musculus
ENSIPUG00000005919	papola	100	68.274	MGP_PahariEiJ_G0029850	Papola	100	68.441	Mus_pahari
ENSIPUG00000005919	papola	100	68.274	MGP_SPRETEiJ_G0018943	Papola	100	68.568	Mus_spretus
ENSIPUG00000005919	papola	100	66.960	ENSMPUG00000003054	PAPOLA	100	68.020	Mustela_putorius_furo
ENSIPUG00000005919	papola	100	67.252	ENSMLUG00000010922	PAPOLA	100	67.934	Myotis_lucifugus
ENSIPUG00000005919	papola	100	68.147	ENSNGAG00000022172	Papola	100	68.528	Nannospalax_galili
ENSIPUG00000005919	papola	99	64.187	ENSNLEG00000000625	PAPOLA	99	65.119	Nomascus_leucogenys
ENSIPUG00000005919	papola	98	64.304	ENSOPRG00000007625	PAPOLA	100	64.889	Ochotona_princeps
ENSIPUG00000005919	papola	67	53.157	ENSONIG00000001062	-	99	53.550	Oreochromis_niloticus
ENSIPUG00000005919	papola	99	65.909	ENSOANG00000013812	PAPOLA	99	67.008	Ornithorhynchus_anatinus
ENSIPUG00000005919	papola	99	65.272	ENSOCUG00000011531	PAPOLA	99	66.581	Oryctolagus_cuniculus
ENSIPUG00000005919	papola	100	66.960	ENSOGAG00000004611	PAPOLA	100	67.889	Otolemur_garnettii
ENSIPUG00000005919	papola	100	67.714	ENSOARG00000016579	-	100	68.401	Ovis_aries
ENSIPUG00000005919	papola	90	81.818	ENSPPAG00000030505	PAPOLA	98	81.784	Pan_paniscus
ENSIPUG00000005919	papola	100	67.134	ENSPPRG00000008616	PAPOLA	100	68.020	Panthera_pardus
ENSIPUG00000005919	papola	99	67.439	ENSPTIG00000018852	PAPOLA	99	68.333	Panthera_tigris_altaica
ENSIPUG00000005919	papola	100	67.254	ENSPTRG00000006704	PAPOLA	100	68.170	Pan_troglodytes
ENSIPUG00000005919	papola	100	67.128	ENSPANG00000025582	PAPOLA	98	84.730	Papio_anubis
ENSIPUG00000005919	papola	100	66.833	ENSPKIG00000014471	papola	91	78.696	Paramormyrops_kingsleyae
ENSIPUG00000005919	papola	100	66.921	ENSPSIG00000014157	PAPOLA	87	67.893	Pelodiscus_sinensis
ENSIPUG00000005919	papola	100	67.893	ENSPEMG00000000043	Papola	100	68.528	Peromyscus_maniculatus_bairdii
ENSIPUG00000005919	papola	100	67.261	ENSPCIG00000013234	PAPOLA	98	69.735	Phascolarctos_cinereus
ENSIPUG00000005919	papola	99	65.832	ENSPPYG00000006128	PAPOLA	100	66.374	Pongo_abelii
ENSIPUG00000005919	papola	84	81.288	ENSPCAG00000004199	PAPOLA	100	66.287	Procavia_capensis
ENSIPUG00000005919	papola	100	63.716	ENSPCOG00000022117	PAPOLA	98	80.073	Propithecus_coquereli
ENSIPUG00000005919	papola	100	66.667	ENSPVAG00000013925	PAPOLA	100	67.261	Pteropus_vampyrus
ENSIPUG00000005919	papola	100	84.444	ENSPNAG00000010467	papola	100	85.079	Pygocentrus_nattereri
ENSIPUG00000005919	papola	100	68.147	ENSRNOG00000004827	Papola	100	68.821	Rattus_norvegicus
ENSIPUG00000005919	papola	99	66.709	ENSRBIG00000038490	PAPOLA	98	84.112	Rhinopithecus_bieti
ENSIPUG00000005919	papola	100	67.128	ENSRROG00000025545	PAPOLA	100	68.045	Rhinopithecus_roxellana
ENSIPUG00000005919	papola	99	67.848	ENSSBOG00000024061	PAPOLA	99	82.967	Saimiri_boliviensis_boliviensis
ENSIPUG00000005919	papola	99	66.709	ENSSHAG00000015211	PAPOLA	99	67.738	Sarcophilus_harrisii
ENSIPUG00000005919	papola	100	68.774	ENSSFOG00015004431	papola	99	86.314	Scleropages_formosus
ENSIPUG00000005919	papola	76	51.661	ENSSDUG00000018247	-	88	51.753	Seriola_dumerili
ENSIPUG00000005919	papola	72	85.311	ENSSPUG00000005835	PAPOLA	100	67.089	Sphenodon_punctatus
ENSIPUG00000005919	papola	100	67.134	ENSSSCG00000002505	-	100	68.020	Sus_scrofa
ENSIPUG00000005919	papola	99	66.582	ENSTGUG00000012687	PAPOLA	100	66.837	Taeniopygia_guttata
ENSIPUG00000005919	papola	60	81.148	ENSTBEG00000000194	PAPOLA	63	81.148	Tupaia_belangeri
ENSIPUG00000005919	papola	69	81.818	ENSTTRG00000005717	PAPOLA	78	78.063	Tursiops_truncatus
ENSIPUG00000005919	papola	57	89.021	ENSUAMG00000025737	PAPOLA	97	89.021	Ursus_americanus
ENSIPUG00000005919	papola	99	67.677	ENSVPAG00000006464	PAPOLA	100	68.367	Vicugna_pacos
ENSIPUG00000005919	papola	100	67.261	ENSVVUG00000028340	PAPOLA	100	68.274	Vulpes_vulpes
ENSIPUG00000005919	papola	100	65.700	ENSXETG00000013949	papola	100	65.700	Xenopus_tropicalis