EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000005975 (Gene tree)
Gene ID: 108266056
Gene Symbol: wibga
Alias: wibg|zgc:65891|zgc:77281
Full Name: PYM homolog 1%2C exon junction complex associated factor
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 7227 bases
Position: chr5:24784078-24791304
Accession: 108266056
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000008749	Mago-bind	PF09282.10	5.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000009129	-	3190	XM_017469018	ENSIPUP00000008749	205 (aa)	XP_017324507	W5UDB9

Gene Model

Click here to download ENSIPUG00000005975's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03013	RNA transport	KEGG
ipu03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000005975's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000005975	wibga	94	58.537	ENSG00000170473	PYM1	100	59.242	Homo_sapiens
ENSIPUG00000005975	wibga	99	68.545	ENSAPOG00000023045	pym1	99	69.953	Acanthochromis_polyacanthus
ENSIPUG00000005975	wibga	91	55.051	ENSAMEG00000003091	PYM1	99	54.460	Ailuropoda_melanoleuca
ENSIPUG00000005975	wibga	99	70.423	ENSACIG00000012769	pym1	99	69.953	Amphilophus_citrinellus
ENSIPUG00000005975	wibga	99	70.755	ENSAOCG00000021358	pym1	99	71.226	Amphiprion_ocellaris
ENSIPUG00000005975	wibga	99	70.755	ENSAPEG00000022679	pym1	99	71.226	Amphiprion_percula
ENSIPUG00000005975	wibga	99	69.048	ENSATEG00000024022	pym1	99	68.571	Anabas_testudineus
ENSIPUG00000005975	wibga	94	52.607	ENSACAG00000005714	PYM1	100	55.605	Anolis_carolinensis
ENSIPUG00000005975	wibga	94	59.296	ENSANAG00000036967	PYM1	100	59.242	Aotus_nancymaae
ENSIPUG00000005975	wibga	100	75.845	ENSAMXG00000007650	pym1	100	77.295	Astyanax_mexicanus
ENSIPUG00000005975	wibga	94	59.223	ENSBTAG00000031146	PYM1	100	58.986	Bos_taurus
ENSIPUG00000005975	wibga	94	59.799	ENSCJAG00000041077	PYM1	100	59.716	Callithrix_jacchus
ENSIPUG00000005975	wibga	94	59.024	ENSCAFG00000000076	PYM1	100	58.525	Canis_familiaris
ENSIPUG00000005975	wibga	94	59.024	ENSCAFG00020026099	PYM1	100	58.525	Canis_lupus_dingo
ENSIPUG00000005975	wibga	94	58.738	ENSCHIG00000026207	PYM1	100	58.525	Capra_hircus
ENSIPUG00000005975	wibga	94	59.024	ENSTSYG00000000787	PYM1	100	58.986	Carlito_syrichta
ENSIPUG00000005975	wibga	89	56.477	ENSCAPG00000010374	PYM1	100	57.561	Cavia_aperea
ENSIPUG00000005975	wibga	94	58.049	ENSCPOG00000031546	PYM1	100	58.525	Cavia_porcellus
ENSIPUG00000005975	wibga	94	59.296	ENSCCAG00000026187	PYM1	100	59.242	Cebus_capucinus
ENSIPUG00000005975	wibga	94	59.512	ENSCATG00000018801	PYM1	100	59.447	Cercocebus_atys
ENSIPUG00000005975	wibga	94	58.049	ENSCLAG00000007964	PYM1	100	57.604	Chinchilla_lanigera
ENSIPUG00000005975	wibga	89	58.247	ENSCSAG00000005291	PYM1	98	58.252	Chlorocebus_sabaeus
ENSIPUG00000005975	wibga	99	37.500	ENSCING00000006448	-	99	39.623	Ciona_intestinalis
ENSIPUG00000005975	wibga	99	40.670	ENSCSAVG00000009805	-	94	40.670	Ciona_savignyi
ENSIPUG00000005975	wibga	94	59.512	ENSCANG00000020338	-	100	59.447	Colobus_angolensis_palliatus
ENSIPUG00000005975	wibga	93	56.931	ENSCANG00000019757	-	85	56.931	Colobus_angolensis_palliatus
ENSIPUG00000005975	wibga	94	56.522	ENSCGRG00001018051	-	100	57.604	Cricetulus_griseus_chok1gshd
ENSIPUG00000005975	wibga	91	53.158	ENSCGRG00001004231	-	98	53.810	Cricetulus_griseus_chok1gshd
ENSIPUG00000005975	wibga	94	56.522	ENSCGRG00000012495	-	100	57.604	Cricetulus_griseus_crigri
ENSIPUG00000005975	wibga	91	53.158	ENSCGRG00000018933	-	98	53.810	Cricetulus_griseus_crigri
ENSIPUG00000005975	wibga	94	69.072	ENSCSEG00000021531	pym1	99	67.317	Cynoglossus_semilaevis
ENSIPUG00000005975	wibga	98	68.421	ENSCVAG00000017360	pym1	88	68.421	Cyprinodon_variegatus
ENSIPUG00000005975	wibga	99	61.765	ENSDARG00000046024	pym1	99	61.275	Danio_rerio
ENSIPUG00000005975	wibga	93	57.426	ENSDNOG00000048414	PYM1	92	56.682	Dasypus_novemcinctus
ENSIPUG00000005975	wibga	94	58.537	ENSDORG00000029448	Pym1	100	58.525	Dipodomys_ordii
ENSIPUG00000005975	wibga	99	34.234	FBgn0034918	Pym	98	33.641	Drosophila_melanogaster
ENSIPUG00000005975	wibga	89	55.155	ENSETEG00000004461	-	100	55.340	Echinops_telfairi
ENSIPUG00000005975	wibga	88	55.208	ENSEASG00005002271	PYM1	86	55.392	Equus_asinus_asinus
ENSIPUG00000005975	wibga	94	58.049	ENSECAG00000011870	PYM1	100	58.065	Equus_caballus
ENSIPUG00000005975	wibga	96	63.861	ENSELUG00000024250	pym1	99	65.196	Esox_lucius
ENSIPUG00000005975	wibga	94	58.049	ENSFCAG00000013967	PYM1	100	58.065	Felis_catus
ENSIPUG00000005975	wibga	94	59.024	ENSFDAG00000006314	PYM1	100	58.986	Fukomys_damarensis
ENSIPUG00000005975	wibga	94	66.176	ENSFHEG00000005884	pym1	99	68.372	Fundulus_heteroclitus
ENSIPUG00000005975	wibga	94	60.938	ENSGMOG00000007239	pym1	97	61.194	Gadus_morhua
ENSIPUG00000005975	wibga	94	59.799	ENSGALG00000046169	PYM1	100	60.185	Gallus_gallus
ENSIPUG00000005975	wibga	99	66.512	ENSGAFG00000003280	pym1	99	69.302	Gambusia_affinis
ENSIPUG00000005975	wibga	100	60.190	ENSGACG00000010703	pym1	99	60.952	Gasterosteus_aculeatus
ENSIPUG00000005975	wibga	92	53.081	ENSGAGG00000001973	PYM1	89	53.271	Gopherus_agassizii
ENSIPUG00000005975	wibga	94	58.049	ENSGGOG00000043246	PYM1	100	58.768	Gorilla_gorilla
ENSIPUG00000005975	wibga	94	69.652	ENSHBUG00000012719	pym1	99	70.283	Haplochromis_burtoni
ENSIPUG00000005975	wibga	93	59.406	ENSHGLG00000017155	PYM1	100	58.525	Heterocephalus_glaber_female
ENSIPUG00000005975	wibga	93	59.406	ENSHGLG00100015341	PYM1	100	58.525	Heterocephalus_glaber_male
ENSIPUG00000005975	wibga	99	60.784	ENSHCOG00000007987	pym1	85	62.255	Hippocampus_comes
ENSIPUG00000005975	wibga	94	59.024	ENSSTOG00000014206	PYM1	100	58.986	Ictidomys_tridecemlineatus
ENSIPUG00000005975	wibga	94	56.931	ENSJJAG00000013338	Pym1	100	57.009	Jaculus_jaculus
ENSIPUG00000005975	wibga	100	66.516	ENSKMAG00000006351	pym1	100	66.968	Kryptolebias_marmoratus
ENSIPUG00000005975	wibga	99	63.679	ENSLBEG00000015707	pym1	99	65.728	Labrus_bergylta
ENSIPUG00000005975	wibga	90	60.396	ENSLACG00000014398	PYM1	95	60.748	Latimeria_chalumnae
ENSIPUG00000005975	wibga	94	59.512	ENSLAFG00000002369	PYM1	100	59.447	Loxodonta_africana
ENSIPUG00000005975	wibga	94	59.512	ENSMFAG00000003048	PYM1	100	59.447	Macaca_fascicularis
ENSIPUG00000005975	wibga	94	59.512	ENSMMUG00000011002	PYM1	100	59.447	Macaca_mulatta
ENSIPUG00000005975	wibga	94	59.512	ENSMNEG00000034677	PYM1	100	59.447	Macaca_nemestrina
ENSIPUG00000005975	wibga	94	59.512	ENSMLEG00000007971	PYM1	100	59.447	Mandrillus_leucophaeus
ENSIPUG00000005975	wibga	99	66.204	ENSMAMG00000001588	pym1	99	68.981	Mastacembelus_armatus
ENSIPUG00000005975	wibga	94	69.154	ENSMZEG00005026458	pym1	99	69.811	Maylandia_zebra
ENSIPUG00000005975	wibga	94	57.073	ENSMAUG00000007318	Pym1	100	58.525	Mesocricetus_auratus
ENSIPUG00000005975	wibga	94	58.049	ENSMICG00000032962	PYM1	100	58.065	Microcebus_murinus
ENSIPUG00000005975	wibga	94	55.610	ENSMOCG00000010208	Pym1	100	55.760	Microtus_ochrogaster
ENSIPUG00000005975	wibga	99	62.255	ENSMMOG00000009301	pym1	99	67.157	Mola_mola
ENSIPUG00000005975	wibga	99	68.692	ENSMALG00000013496	pym1	99	69.626	Monopterus_albus
ENSIPUG00000005975	wibga	93	57.921	MGP_CAROLIEiJ_G0015953	Pym1	100	57.143	Mus_caroli
ENSIPUG00000005975	wibga	93	57.921	ENSMUSG00000064030	Pym1	100	57.143	Mus_musculus
ENSIPUG00000005975	wibga	93	58.794	MGP_PahariEiJ_G0031131	Pym1	100	57.944	Mus_pahari
ENSIPUG00000005975	wibga	93	57.921	MGP_SPRETEiJ_G0016778	Pym1	100	57.143	Mus_spretus
ENSIPUG00000005975	wibga	94	58.049	ENSMPUG00000000931	PYM1	100	58.065	Mustela_putorius_furo
ENSIPUG00000005975	wibga	93	56.219	ENSMLUG00000003586	PYM1	100	55.556	Myotis_lucifugus
ENSIPUG00000005975	wibga	90	55.385	ENSNGAG00000019207	Pym1	94	55.556	Nannospalax_galili
ENSIPUG00000005975	wibga	99	68.868	ENSNBRG00000006951	pym1	99	70.283	Neolamprologus_brichardi
ENSIPUG00000005975	wibga	94	58.537	ENSNLEG00000017588	PYM1	100	59.242	Nomascus_leucogenys
ENSIPUG00000005975	wibga	88	52.332	ENSMEUG00000001017	PYM1	100	51.707	Notamacropus_eugenii
ENSIPUG00000005975	wibga	92	56.219	ENSOPRG00000007797	PYM1	97	55.660	Ochotona_princeps
ENSIPUG00000005975	wibga	94	58.537	ENSODEG00000004289	PYM1	100	58.525	Octodon_degus
ENSIPUG00000005975	wibga	94	70.098	ENSONIG00000016740	pym1	99	70.698	Oreochromis_niloticus
ENSIPUG00000005975	wibga	89	57.216	ENSOCUG00000025969	PYM1	86	57.282	Oryctolagus_cuniculus
ENSIPUG00000005975	wibga	99	66.981	ENSORLG00000030592	pym1	99	65.566	Oryzias_latipes
ENSIPUG00000005975	wibga	99	65.566	ENSORLG00020011264	pym1	99	64.623	Oryzias_latipes_hni
ENSIPUG00000005975	wibga	99	66.038	ENSORLG00015005287	pym1	99	64.623	Oryzias_latipes_hsok
ENSIPUG00000005975	wibga	99	66.977	ENSOMEG00000022250	pym1	99	66.977	Oryzias_melastigma
ENSIPUG00000005975	wibga	89	57.732	ENSOGAG00000007038	PYM1	94	57.282	Otolemur_garnettii
ENSIPUG00000005975	wibga	94	58.738	ENSOARG00000010856	PYM1	100	58.525	Ovis_aries
ENSIPUG00000005975	wibga	94	58.537	ENSPPAG00000043630	PYM1	100	59.242	Pan_paniscus
ENSIPUG00000005975	wibga	94	58.049	ENSPPRG00000013243	PYM1	100	58.065	Panthera_pardus
ENSIPUG00000005975	wibga	94	58.049	ENSPTIG00000017380	PYM1	100	58.065	Panthera_tigris_altaica
ENSIPUG00000005975	wibga	94	58.537	ENSPTRG00000005067	PYM1	100	59.242	Pan_troglodytes
ENSIPUG00000005975	wibga	94	59.024	ENSPANG00000009562	PYM1	100	58.986	Papio_anubis
ENSIPUG00000005975	wibga	100	65.899	ENSPKIG00000006301	pym1	100	65.899	Paramormyrops_kingsleyae
ENSIPUG00000005975	wibga	94	52.153	ENSPSIG00000003043	PYM1	100	51.584	Pelodiscus_sinensis
ENSIPUG00000005975	wibga	100	67.317	ENSPMGG00000023161	pym1	100	67.317	Periophthalmus_magnuspinnatus
ENSIPUG00000005975	wibga	94	56.585	ENSPEMG00000009372	Pym1	100	57.143	Peromyscus_maniculatus_bairdii
ENSIPUG00000005975	wibga	88	52.850	ENSPCIG00000024658	PYM1	93	52.427	Phascolarctos_cinereus
ENSIPUG00000005975	wibga	99	71.564	ENSPFOG00000008193	pym1	99	71.564	Poecilia_formosa
ENSIPUG00000005975	wibga	99	70.233	ENSPLAG00000009228	pym1	99	70.233	Poecilia_latipinna
ENSIPUG00000005975	wibga	99	70.233	ENSPMEG00000001505	pym1	99	70.233	Poecilia_mexicana
ENSIPUG00000005975	wibga	90	57.143	ENSPPYG00000004635	PYM1	98	58.000	Pongo_abelii
ENSIPUG00000005975	wibga	94	58.537	ENSPCOG00000019706	PYM1	100	58.525	Propithecus_coquereli
ENSIPUG00000005975	wibga	90	57.949	ENSPVAG00000011437	PYM1	98	57.005	Pteropus_vampyrus
ENSIPUG00000005975	wibga	94	68.159	ENSPNYG00000012871	pym1	99	70.283	Pundamilia_nyererei
ENSIPUG00000005975	wibga	100	75.598	ENSPNAG00000018833	pym1	100	79.048	Pygocentrus_nattereri
ENSIPUG00000005975	wibga	92	54.000	ENSRNOG00000058130	Pym1	98	53.953	Rattus_norvegicus
ENSIPUG00000005975	wibga	92	44.444	ENSRNOG00000049415	AABR07055413.1	100	43.204	Rattus_norvegicus
ENSIPUG00000005975	wibga	94	55.610	ENSRBIG00000033362	PYM1	100	55.760	Rhinopithecus_bieti
ENSIPUG00000005975	wibga	94	59.512	ENSRROG00000043620	PYM1	100	59.447	Rhinopithecus_roxellana
ENSIPUG00000005975	wibga	94	59.296	ENSSBOG00000029393	PYM1	100	59.242	Saimiri_boliviensis_boliviensis
ENSIPUG00000005975	wibga	93	55.825	ENSSHAG00000008280	PYM1	100	54.795	Sarcophilus_harrisii
ENSIPUG00000005975	wibga	93	66.837	ENSSFOG00015021475	pym1	99	65.714	Scleropages_formosus
ENSIPUG00000005975	wibga	99	65.385	ENSSMAG00000020912	pym1	99	66.346	Scophthalmus_maximus
ENSIPUG00000005975	wibga	99	66.512	ENSSDUG00000001807	pym1	99	67.442	Seriola_dumerili
ENSIPUG00000005975	wibga	99	66.359	ENSSLDG00000013730	pym1	99	67.281	Seriola_lalandi_dorsalis
ENSIPUG00000005975	wibga	89	56.701	ENSSARG00000009569	PYM1	100	57.767	Sorex_araneus
ENSIPUG00000005975	wibga	89	55.102	ENSSPUG00000015059	PYM1	97	53.555	Sphenodon_punctatus
ENSIPUG00000005975	wibga	99	71.495	ENSSPAG00000020100	pym1	99	71.495	Stegastes_partitus
ENSIPUG00000005975	wibga	94	59.709	ENSSSCG00000040825	PYM1	100	58.986	Sus_scrofa
ENSIPUG00000005975	wibga	99	70.531	ENSTRUG00000021367	pym1	100	70.531	Takifugu_rubripes
ENSIPUG00000005975	wibga	99	66.502	ENSTNIG00000012534	pym1	99	66.995	Tetraodon_nigroviridis
ENSIPUG00000005975	wibga	88	54.974	ENSTBEG00000004208	PYM1	100	53.398	Tupaia_belangeri
ENSIPUG00000005975	wibga	90	56.410	ENSTTRG00000014971	PYM1	98	57.488	Tursiops_truncatus
ENSIPUG00000005975	wibga	94	58.537	ENSUAMG00000014521	PYM1	100	58.525	Ursus_americanus
ENSIPUG00000005975	wibga	91	55.556	ENSUMAG00000016241	PYM1	90	54.460	Ursus_maritimus
ENSIPUG00000005975	wibga	94	58.537	ENSVVUG00000022749	PYM1	100	57.604	Vulpes_vulpes
ENSIPUG00000005975	wibga	94	62.814	ENSXETG00000021850	pym1	100	62.559	Xenopus_tropicalis
ENSIPUG00000005975	wibga	99	66.047	ENSXMAG00000011649	pym1	99	69.302	Xiphophorus_maculatus